Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00116 Aquilegia oxysepala HOM05D004162 ORTHO05D004543 1.8e-281 971.8 470 100.0
Aqoxy7G03636 Aquilegia oxysepala HOM05D000527 ORTHO05D004543 5.1e-199 698.0 390 86.9
TAR371G1103 Trochodendron aralioides HOM05D004162 ORTHO05D004543 2.0e-155 553.1 458 57.6
Nn4g24245 Nelumbo nucifera HOM05D004162 ORTHO05D004543 2.8e-149 532.7 456 55.5
GSVIVG01008445001 Vitis vinifera HOM05D004162 ORTHO05D004543 4.1e-148 528.9 457 54.7
Cc04_g06230 Coffea canephora HOM05D004162 ORTHO05D004543 2.6e-139 499.6 459 51.9
Lj5C158G4 Lonicera japonica HOM05D004162 ORTHO05D004543 1.7e-138 496.9 466 50.6
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 7.2e-137 491.5 465 50.3
Cfa019653 Carpinus fangiana HOM05D004162 ORTHO05D004543 3.0e-135 486.1 456 51.5
CSS0046385 Camellia sinensis var. sinensis HOM05D004162 ORTHO05D004543 4.4e-134 482.3 459 49.7
MBI08_g04930_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 1.7e-133 480.3 451 51.4
Ah.04g164220 Amaranthus hybridus HOM05D004162 ORTHO05D004543 2.2e-133 479.9 469 49.0
Haze_18859 Corylus avellana HOM05D004162 ORTHO05D004543 1.8e-132 476.9 455 50.8
CAN.G660.38 Capsicum annuum HOM05D004162 ORTHO05D004543 1.3e-130 470.7 456 50.0
Migut.D01539 Erythranthe guttata HOM05D004162 ORTHO05D004543 2.2e-130 469.9 461 50.8
Ciclev10008209m.g Citrus clementina HOM05D004162 ORTHO05D004543 8.5e-130 468.0 459 48.6
EL10Ac4g08358 Beta vulgaris HOM05D004162 ORTHO05D004543 1.1e-129 467.6 507 47.1
CiPaw.15G143600 Carya illinoinensis HOM05D004162 ORTHO05D004543 2.5e-129 466.5 456 50.2
PGSC0003DMG400021171 Solanum tuberosum HOM05D004162 ORTHO05D004543 3.2e-129 466.1 456 49.8
MSTRG.9305 Avicennia marina HOM05D004162 ORTHO05D004543 8.0e-128 461.5 475 49.7
Sopen02g019390 Solanum pennellii HOM05D004162 ORTHO05D004543 8.0e-128 461.5 453 50.6
HanXRQChr14g0447361 Helianthus annuus HOM05D004162 ORTHO05D004543 1.0e-127 461.1 458 48.9
Dinv08781 Davidia involucrata HOM05D004162 ORTHO05D004543 5.2e-127 458.8 408 54.7
Solyc02g070300.4 Solanum lycopersicum HOM05D004162 ORTHO05D004543 5.2e-127 458.8 456 49.8
SalBow3G1690 Salvia bowleyana HOM05D004162 ORTHO05D004543 1.5e-126 457.2 460 49.3
SalBow3G1953 Salvia bowleyana HOM05D004162 ORTHO05D004543 1.5e-126 457.2 460 49.3
Manes.06G005900 Manihot esculenta HOM05D004162 ORTHO05D004543 2.0e-126 456.8 426 50.0
TWI81G0681 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 2.6e-126 456.4 459 48.4
Peaxi162Scf00050g02313 Petunia axillaris HOM05D004162 ORTHO05D004543 7.5e-126 454.9 456 48.0
PSO210G3845 Papaver somniferum HOM05D004162 ORTHO05D004543 1.3e-125 454.1 532 45.7
Atru.chr9.1725 Acer truncatum HOM05D004162 ORTHO05D004543 6.3e-125 451.8 470 48.3
ECA238G4801 Erigeron canadensis HOM05D004162 ORTHO05D004543 6.3e-125 451.8 460 47.8
Eucgr.B00998 Eucalyptus grandis HOM05D004162 ORTHO05D004543 8.3e-125 451.4 470 47.0
Atru.chr9.1709 Acer truncatum HOM05D004162 ORTHO05D004543 2.4e-124 449.9 470 48.1
MBI07_g11051_MAGBIO Magnolia biondii HOM05D004162 ORTHO05D004543 4.1e-124 449.1 458 48.9
Lsat_1_v5_gn_2_63961 Lactuca sativa HOM05D004162 ORTHO05D004543 1.3e-122 444.1 456 46.9
Nn3g21925 Nelumbo nucifera HOM05D004162 ORTHO05D004543 2.2e-122 443.4 457 49.5
Thecc.03G055600 Theobroma cacao HOM05D004162 ORTHO05D004543 5.0e-122 442.2 458 47.8
QL10p029785 Quercus lobata HOM05D004162 ORTHO05D004543 1.9e-121 440.3 541 43.3
TAR636G2328 Trochodendron aralioides HOM05D004162 ORTHO05D004543 3.6e-120 436.0 377 57.6
PGR083G0911 Punica granatum HOM05D004162 ORTHO05D004543 1.4e-119 434.1 467 45.6
Oeu046631.1 Olea europaea HOM05D004162 ORTHO05D004543 7.5e-118 428.3 465 46.5
SGA_v2.0_scaffold172G39016 Striga asiatica HOM05D004162 ORTHO05D004543 8.3e-117 424.9 472 47.0
Duzib205G1017 Durio zibethinus HOM05D004162 ORTHO05D004543 7.0e-116 421.8 459 46.2
ClCG04G010610 Citrullus lanatus HOM05D004162 ORTHO05D004543 2.7e-115 419.9 457 46.2
CANSAT80G1525 Cannabis sativa HOM05D004162 ORTHO05D004543 5.2e-111 405.6 467 44.8
Lalb_Chr05g0221631 Lupinus albus HOM05D004162 ORTHO05D004543 1.5e-110 404.1 457 44.2
CsaV3_1G007180 Cucumis sativus L. HOM05D004162 ORTHO05D004543 2.6e-110 403.3 465 44.1
Nitab4.5_0000869g0150 Nicotiana tabacum HOM05D004162 ORTHO05D004543 6.3e-109 398.7 478 44.1
Sed0019203 Sechium edule HOM05D004162 ORTHO05D004543 3.5e-107 392.9 456 43.6
CANSAT54G2092 Cannabis sativa HOM05D004162 ORTHO05D004543 1.0e-106 391.3 468 44.0
Gohir.A12G191000 Gossypium hirsutum HOM05D004162 ORTHO05D004543 1.2e-104 384.4 459 43.4
Gohir.D12G193100 Gossypium hirsutum HOM05D004162 ORTHO05D004543 4.7e-104 382.5 459 42.7
Gorai.008G207900 Gossypium raimondii HOM05D004162 ORTHO05D004543 4.7e-104 382.5 459 42.7
Nitab4.5_0005963g0070 Nicotiana tabacum HOM05D004162 ORTHO05D004543 4.7e-104 382.5 460 44.3
unitig_22.g6151 Utricularia gibba HOM05D004162 ORTHO05D004543 6.1e-104 382.1 462 42.0
Peaxi162Scf00420g00077 Petunia axillaris HOM05D004162 ORTHO05D004543 8.0e-104 381.7 483 43.9
Nitab4.5_0001756g0030 Nicotiana tabacum HOM05D004162 ORTHO05D004543 3.1e-103 379.8 415 47.7
MD06G1227400 Malus domestica HOM05D004162 ORTHO05D004543 1.2e-102 377.9 462 44.2
Psat4g000200 Pisum sativum HOM05D004162 ORTHO05D004543 1.2e-102 377.9 463 42.5
DCAR_003065 Daucus carota HOM05D004162 ORTHO05D004543 2.0e-102 377.1 374 50.0
Gorai.001G082700 Gossypium raimondii HOM05D004162 ORTHO05D004543 9.8e-102 374.8 461 43.4
Gohir.D07G078300 Gossypium hirsutum HOM05D004162 ORTHO05D004543 6.4e-101 372.1 461 43.2
ATR0594G087 Amborella trichopoda HOM05D004162 ORTHO05D004543 2.4e-100 370.2 470 42.1
RcHm_v2.0_Chr7g0178331 Rosa chinensis HOM05D004162 ORTHO05D004543 2.4e-100 370.2 468 41.5
Ca_17185_v3 Cicer arietinum L. HOM05D004162 ORTHO05D004543 2.0e-99 367.1 481 41.4
MELO3C002134.2 Cucumis melo HOM05D004162 ORTHO05D004543 3.0e-98 363.2 471 42.9
FvH4_6g53500 Fragaria vesca HOM05D004162 ORTHO05D004543 6.6e-98 362.1 468 41.5
FAN05G0184 Fragaria x ananassa HOM05D004162 ORTHO05D004543 6.6e-98 362.1 459 42.3
FAN14G2905 Fragaria x ananassa HOM05D004162 ORTHO05D004543 6.6e-98 362.1 468 41.5
PSO832G0101 Papaver somniferum HOM05D004162 ORTHO05D004543 6.6e-98 362.1 463 43.6
MD13G1006200 Malus domestica HOM05D004162 ORTHO05D004543 1.6e-96 357.5 471 42.5
Actinidia07535 Actinidia chinensis HOM05D004162 ORTHO05D004543 1.1e-95 354.8 453 42.4
Haze_09240 Corylus avellana HOM05D004162 ORTHO05D004543 1.4e-95 354.4 454 42.1
Cfa011869 Carpinus fangiana HOM05D004162 ORTHO05D004543 1.8e-95 354.0 455 42.6
Oeu011444.1 Olea europaea HOM05D004162 ORTHO05D004543 5.2e-95 352.4 455 41.3
Prupe.5G233900 Prunus persica HOM05D004162 ORTHO05D004543 1.5e-94 350.9 385 48.1
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea HOM05D004162 ORTHO05D004543 2.0e-94 350.5 456 39.7
FAN02G2531 Fragaria x ananassa HOM05D004162 ORTHO05D004543 2.6e-94 350.1 467 41.1
HPP92_005364 Vanilla planifolia HOM05D004162 ORTHO05D004543 1.7e-93 347.4 464 40.5
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea HOM05D004162 ORTHO05D004543 1.4e-92 344.4 454 39.2
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea HOM05D004162 ORTHO05D004543 2.4e-92 343.6 456 39.0
FAN09G1804 Fragaria x ananassa HOM05D004162 ORTHO05D004543 4.1e-92 342.8 503 38.8
COL.COLO4_05717 Corchorus olitorius HOM05D004162 ORTHO05D004543 7.1e-92 342.0 380 46.1
Medtr8g107380 Medicago truncatula HOM05D004162 ORTHO05D004543 1.2e-91 341.3 474 39.9
PSO339G4834 Papaver somniferum HOM05D004162 ORTHO05D004543 2.1e-91 340.5 450 42.2
FAN02G1371 Fragaria x ananassa HOM05D004162 ORTHO05D004543 7.8e-91 338.6 490 39.0
Glyma.05G246600 Glycine max HOM05D004162 ORTHO05D004543 1.7e-90 337.4 469 38.4
THA.LOC104812555 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 4.3e-89 332.8 464 39.7
PSO513G0134 Papaver somniferum HOM05D004162 ORTHO05D004543 7.3e-89 332.0 450 41.1
TWI75G0727 Tripterygium wilfordii HOM05D004162 ORTHO05D004543 1.8e-87 327.4 447 41.4
Atru.chr1.59 Acer truncatum HOM05D004162 ORTHO05D004543 2.3e-87 327.0 433 41.3
Thhalv10028628m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 6.8e-87 325.5 482 37.8
Aa31LG5G17260 Aethionema arabicum HOM05D004162 ORTHO05D004543 7.5e-86 322.0 454 37.9
VMungo0251G2472 Vigna mungo HOM05D004162 ORTHO05D004543 3.7e-85 319.7 449 38.3
Glyma.08G054800 Glycine max HOM05D004162 ORTHO05D004543 8.3e-85 318.5 425 40.5
Rhsim02G0000200 Rhododendron simsii HOM05D004162 ORTHO05D004543 1.4e-84 317.8 386 45.6
Cc07_g00810 Coffea canephora HOM05D004162 ORTHO05D004543 2.1e-83 313.9 455 38.9
Rhsim08G0126500 Rhododendron simsii HOM05D004162 ORTHO05D004543 4.6e-83 312.8 263 57.0
AL3G42790 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 1.7e-82 310.8 470 38.3
Sp6g08970 Schrenkiella parvula HOM05D004162 ORTHO05D004543 1.7e-82 310.8 482 38.2
AT2G05210 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 3.0e-82 310.1 482 37.8
CARHR103050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 1.5e-81 307.8 482 36.9
AL6G16350 Arabidopsis lyrata HOM05D004162 ORTHO05D004543 1.2e-80 304.7 465 37.4
BolC9t59794H Brassica oleracea HOM05D004162 ORTHO05D004543 1.2e-80 304.7 458 37.6
AUR62037555 Chenopodium quinoa HOM05D004162 ORTHO05D004543 1.2e-80 304.7 337 47.5
BraA10t45047Z Brassica rapa HOM05D004162 ORTHO05D004543 1.6e-80 304.3 459 37.3
AT5G06310 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 2.1e-80 303.9 463 37.1
Thhalv10013532m.g Eutrema salsugineum HOM05D004162 ORTHO05D004543 2.8e-80 303.5 455 38.2
C09p70490 Brassica napus HOM05D004162 ORTHO05D004543 3.6e-80 303.1 457 37.4
Carub.0006s0520 Capsella rubella HOM05D004162 ORTHO05D004543 3.6e-80 303.1 455 37.4
A10p30070 Brassica napus HOM05D004162 ORTHO05D004543 1.4e-79 301.2 457 37.2
Zm00001eb433700 Zea mays HOM05D004162 ORTHO05D004543 4.4e-78 296.2 468 36.3
Sp6g36540 Schrenkiella parvula HOM05D004162 ORTHO05D004543 1.7e-77 294.3 455 36.7
Mapoly0002s0230 Marchantia polymorpha HOM05D004162 ORTHO05D004543 8.4e-77 292.0 509 36.7
CDE11G0199 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 1.2e-75 288.1 305 48.5
THA.LOC104810218 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 6.6e-74 282.3 472 35.4
THA.LOC104826807 Tarenaya hassleriana HOM05D004162 ORTHO05D004543 6.6e-74 282.3 472 35.4
BcaC04g21892 Brassica carinata HOM05D004162 ORTHO05D004543 9.6e-73 278.5 475 35.4
C09p26100 Brassica napus HOM05D004162 ORTHO05D004543 9.6e-73 278.5 475 35.4
CARHR207050 Cardamine hirsuta HOM05D004162 ORTHO05D004543 1.6e-72 277.7 455 35.2
BolC9t55513H Brassica oleracea HOM05D004162 ORTHO05D004543 6.2e-72 275.8 475 34.9
A09p20680 Brassica napus HOM05D004162 ORTHO05D004543 2.4e-71 273.9 459 36.2
Phvul.002G330500 Phaseolus vulgaris HOM05D004162 ORTHO05D004543 9.0e-71 271.9 308 45.5
BraA09t37672Z Brassica rapa HOM05D004162 ORTHO05D004543 1.2e-70 271.6 459 36.2
CANSAT78G2305 Cannabis sativa HOM05D004162 ORTHO05D004543 2.0e-70 270.8 466 35.6
Ciclev10005180m.g Citrus clementina HOM05D004162 ORTHO05D004543 2.0e-70 270.8 380 39.7
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla HOM05D004162 ORTHO05D004543 9.9e-70 268.5 303 48.5
Pp3c18_21900 Physcomitrium patens HOM05D004162 ORTHO05D004543 7.1e-68 262.3 489 34.6
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis HOM05D004162 ORTHO05D004543 4.6e-67 259.6 487 34.3
BcaB07g30993 Brassica carinata HOM05D004162 ORTHO05D004543 7.8e-67 258.8 471 35.0
BcaC06g32364 Brassica carinata HOM05D004162 ORTHO05D004543 3.9e-66 256.5 458 35.4
vmacro09753 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 6.6e-66 255.8 491 34.4
SHI19078 Sapria himalayana HOM05D004162 ORTHO05D004543 1.8e-63 247.7 262 49.2
Dinv27223 Davidia involucrata HOM05D004162 ORTHO05D004543 4.0e-63 246.5 292 43.8
SMO358G0036 Selaginella moellendorffii HOM05D002930 ORTHO05D003283 1.4e-60 238.0 504 32.5
Sc04g0004810 Simmondsia chinensis HOM05D004162 ORTHO05D004543 1.4e-60 238.0 310 41.0
unitig_90.g27442 Utricularia gibba HOM05D004162 ORTHO05D004543 2.5e-57 227.3 454 31.9
Gohir.A07G073600 Gossypium hirsutum HOM05D004162 ORTHO05D004543 8.1e-56 222.2 314 36.9
Potri.012G046400 Populus trichocarpa HOM05D004162 ORTHO05D004543 8.4e-53 212.2 255 43.1
VMungo0251G0610 Vigna mungo HOM05D004162 ORTHO05D004543 2.7e-51 207.2 426 32.6
CDE02G0891 Ceratophyllum demersum HOM05D004162 ORTHO05D004543 1.1e-49 201.8 192 51.0
Carub.0003s2670 Capsella rubella HOM05D004162 ORTHO05D004543 4.8e-48 196.4 371 33.4
Cfa023195 Carpinus fangiana HOM05D004162 ORTHO05D004543 4.0e-47 193.4 297 37.7
Lj4g0021249 Lotus japonicus HOM05D002609 ORTHO05D002820 1.5e-46 191.4 251 39.8
AUR62019586 Chenopodium quinoa HOM05D004162 ORTHO05D004543 2.9e-45 187.2 138 64.5
TPR.G1445 Trifolium pratense HOM05D004162 ORTHO05D004543 7.1e-44 182.6 292 38.0
AUR62013945 Chenopodium quinoa HOM05D004162 ORTHO05D004543 1.5e-38 164.9 130 60.8
CiPaw.09G010800 Carya illinoinensis HOM05D004162 ORTHO05D004543 6.5e-37 159.5 204 44.1
CBR_g32246 Chara braunii HOM05D004162 ORTHO05D004543 2.2e-32 144.4 433 27.0
Hund17739 Selenicereus undatus HOM05D004162 ORTHO05D004543 2.0e-30 137.9 142 44.4
CBR_g34767 Chara braunii HOM05D004162 ORTHO05D004543 6.7e-26 122.9 297 30.0
HPP92_005316 Vanilla planifolia HOM05D004162 ORTHO05D004543 3.2e-20 104.0 199 30.2
CiPaw.09G010700 Carya illinoinensis HOM05D004162 ORTHO05D004543 3.3e-17 94.0 117 40.2
ATR1149G147 Amborella trichopoda HOM05D004162 ORTHO05D004543 1.4e-15 88.6 134 37.3
SEGI_33776 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 5.3e-15 86.7 168 34.5
Sabra12G0032500 Salix brachista HOM05D004162 ORTHO05D004543 1.7e-13 81.6 81 43.2
SEGI_28626 Sequoiadendron giganteum HOM05D004162 ORTHO05D004543 3.8e-13 80.5 115 40.9
Haze_09935 Corylus avellana HOM05D001513 ORTHO05D004543 1.2e-11 75.5 58 58.6
Lj1g0024684 Lotus japonicus HOM05D004162 ORTHO05D004543 6.1e-11 73.2 62 56.5
AT2G04395 Arabidopsis thaliana HOM05D004162 ORTHO05D004543 1.0e-10 72.4 87 33.3
MCO05G023 Micromonas commoda HOM05D004162 ORTHO05D004543 2.6e-09 67.8 417 21.3
vmacro09754 Vaccinium macrocarpon HOM05D004162 ORTHO05D004543 1.3e-08 65.5 91 35.2
QL10p030172 Quercus lobata HOM05D004162 ORTHO05D004543 2.7e-06 57.8 62 45.2


User provided reference genes

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