Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 2.8e-123 445.3 224 100.0
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 2.7e-97 359.0 219 81.3
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 4.5e-97 358.2 219 80.8
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 5.9e-97 357.8 219 82.6
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 5.9e-97 357.8 219 81.7
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 2.2e-96 355.9 231 77.9
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 5.0e-96 354.8 219 80.8
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 8.5e-96 354.0 219 80.4
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 8.5e-96 354.0 218 80.7
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 1.9e-95 352.8 222 77.9
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 4.2e-95 351.7 219 80.4
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 4.2e-95 351.7 219 80.4
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 5.5e-95 351.3 222 79.7
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 5.5e-95 351.3 219 79.5
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 5.5e-95 351.3 222 77.0
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 7.2e-95 350.9 219 79.5
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 7.2e-95 350.9 219 79.0
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 9.4e-95 350.5 218 79.8
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 1.2e-94 350.1 222 77.9
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 1.6e-94 349.7 219 78.5
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.6e-94 349.7 219 79.0
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 2.1e-94 349.4 222 79.3
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 2.7e-94 349.0 219 80.4
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 3.6e-94 348.6 222 80.6
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 3.6e-94 348.6 219 78.5
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 3.6e-94 348.6 219 78.5
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 4.7e-94 348.2 222 77.0
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 4.7e-94 348.2 222 77.0
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 6.1e-94 347.8 225 79.6
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 8.0e-94 347.4 219 79.0
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.0e-93 347.1 219 79.5
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 1.4e-93 346.7 218 79.4
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 1.4e-93 346.7 222 79.3
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 1.4e-93 346.7 219 79.0
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 1.8e-93 346.3 219 80.8
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 2.3e-93 345.9 219 78.1
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.0e-93 345.5 219 78.5
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 3.0e-93 345.5 219 78.5
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 3.0e-93 345.5 222 76.6
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 4.0e-93 345.1 219 78.1
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.2e-93 344.7 218 78.9
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 5.2e-93 344.7 219 77.6
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 6.8e-93 344.4 219 77.6
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 8.8e-93 344.0 219 77.2
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.2e-92 343.6 219 77.6
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.2e-92 343.6 219 78.1
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 1.5e-92 343.2 219 78.1
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 1.5e-92 343.2 219 76.3
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.4e-92 342.0 219 77.2
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 4.4e-92 341.7 219 77.2
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 5.7e-92 341.3 216 77.8
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 7.5e-92 340.9 222 78.8
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 9.8e-92 340.5 219 76.7
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 9.8e-92 340.5 219 76.7
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 1.3e-91 340.1 218 78.0
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 1.7e-91 339.7 219 77.2
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.2e-91 339.3 221 79.2
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 4.9e-91 338.2 219 76.3
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 6.3e-91 337.8 222 77.5
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 8.3e-91 337.4 219 77.2
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 8.3e-91 337.4 220 76.4
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.4e-90 336.7 219 76.7
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.4e-90 334.7 210 78.6
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 2.7e-89 332.4 222 76.1
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 3.5e-89 332.0 223 75.3
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.5e-89 332.0 222 73.4
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 4.5e-89 331.6 219 75.8
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 5.9e-89 331.3 219 74.9
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 2.9e-88 328.9 219 74.0
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 3.8e-88 328.6 219 74.0
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 3.8e-88 328.6 219 74.0
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 3.8e-88 328.6 223 74.9
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 5.0e-88 328.2 219 74.4
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 2.5e-87 325.9 219 72.6
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 3.3e-87 325.5 219 73.5
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 4.3e-87 325.1 219 73.1
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 5.6e-87 324.7 219 73.5
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 9.5e-87 323.9 219 73.5
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 9.5e-87 323.9 219 73.1
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 9.5e-87 323.9 219 73.5
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.6e-86 323.2 219 71.7
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 2.1e-86 322.8 222 73.9
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.1e-86 322.8 219 74.0
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 2.8e-86 322.4 219 73.5
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 2.8e-86 322.4 223 72.6
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 2.8e-86 322.4 218 74.3
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 3.6e-86 322.0 219 73.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 3.0e-85 318.9 224 71.0
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 3.0e-85 318.9 219 71.2
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 3.0e-85 318.9 219 71.2
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 3.0e-85 318.9 219 71.2
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 3.0e-85 318.9 223 71.3
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 3.0e-85 318.9 219 72.1
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.0e-84 316.2 221 72.4
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.6e-84 315.8 219 72.1
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 5.7e-84 314.7 219 71.7
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 2.9e-83 312.4 223 70.9
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 1.3e-80 303.5 221 70.6
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 3.4e-76 288.9 219 66.7
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 2.0e-73 279.6 163 81.0
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 1.0e-72 277.3 220 64.1
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 2.1e-70 269.6 167 79.6
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 3.6e-70 268.9 220 63.6
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 3.1e-69 265.8 219 61.2
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 8.6e-64 247.7 179 68.7
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.2e-62 243.8 150 77.3
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.2e-59 233.0 135 80.7
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 2.9e-59 232.6 144 74.3
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 4.1e-58 228.8 153 71.9
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 9.2e-58 227.6 254 50.8
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.7e-57 226.1 139 76.3
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.6e-54 216.9 130 76.9
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 8.9e-53 211.1 130 74.6
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 2.1e-46 189.9 229 46.3
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 1.6e-41 173.7 219 49.3
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 2.1e-41 173.3 178 51.1
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 7.9e-41 171.4 106 81.1
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.6e-38 163.7 164 52.4
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 1.9e-31 140.2 88 71.6
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 7.1e-26 121.7 88 77.3
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 1.3e-24 117.5 72 73.6
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.7e-22 109.4 139 50.4
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 2.4e-21 106.7 244 32.4
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 9.3e-18 94.7 71 73.2
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 4.6e-17 92.4 60 66.7
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.0e-16 91.3 82 58.5
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 6.7e-16 88.6 65 70.8
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.1e-13 81.3 57 68.4


User provided reference genes

Program Settings