Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04146 Aquilegia oxysepala HOM05D000434 ORTHO05D031258 8.5e-57 223.4 109 100.0
Aqoxy1G01636 Aquilegia oxysepala HOM05D000434 ORTHO05D031258 2.0e-53 212.2 109 96.3
Aqoxy356s002 Aquilegia oxysepala HOM05D000434 ORTHO05D031258 2.0e-53 212.2 109 96.3
Lj5g0000210 Lotus japonicus HOM05D000434 ORTHO05D005487 7.5e-29 130.6 107 57.0
Phvul.007G026100 Phaseolus vulgaris HOM05D000434 ORTHO05D005487 1.4e-27 126.3 107 56.1
COL.COLO4_07904 Corchorus olitorius HOM05D000434 ORTHO05D005487 1.8e-27 125.9 107 57.9
MELO3C012233.2 Cucumis melo HOM05D000434 ORTHO05D005487 1.8e-27 125.9 107 57.9
Glyma.10G275400 Glycine max HOM05D000434 ORTHO05D005487 2.4e-27 125.6 106 56.6
ClCG05G022840 Citrullus lanatus HOM05D000434 ORTHO05D005487 3.1e-27 125.2 106 58.5
Glyma.20G114300 Glycine max HOM05D000434 ORTHO05D005487 3.1e-27 125.2 107 55.1
Os12g0640800 Oryza sativa ssp. japonica HOM05D001644 ORTHO05D005487 3.1e-27 125.2 107 56.1
Atru.chr11.1294 Acer truncatum HOM05D000434 ORTHO05D005487 4.1e-27 124.8 107 57.0
Aqoxy3G00326 Aquilegia oxysepala HOM05D000434 ORTHO05D005487 5.4e-27 124.4 107 59.8
Ciclev10030630m.g Citrus clementina HOM05D000434 ORTHO05D005487 5.4e-27 124.4 107 57.0
Nn4g23805 Nelumbo nucifera HOM05D000434 ORTHO05D005487 5.4e-27 124.4 107 57.9
Actinidia16640 Actinidia chinensis HOM05D000434 ORTHO05D005487 7.0e-27 124.0 107 55.1
VMungo0720G1375 Vigna mungo HOM05D000434 ORTHO05D005487 7.0e-27 124.0 108 54.6
CARHR146790 Cardamine hirsuta HOM05D000434 ORTHO05D005487 9.1e-27 123.6 108 56.5
Sopen05g005350 Solanum pennellii HOM05D000434 ORTHO05D005487 9.1e-27 123.6 107 56.1
Psat6g229160 Pisum sativum HOM05D000434 ORTHO05D005487 1.2e-26 123.2 107 55.1
Hma1.2p1_0030F.1_g018190 Hydrangea macrophylla HOM05D000434 ORTHO05D005487 1.6e-26 122.9 107 55.1
Lj3A1017G50 Lonicera japonica HOM05D000434 ORTHO05D005487 2.0e-26 122.5 107 55.1
Lalb_Chr02g0146071 Lupinus albus HOM05D000434 ORTHO05D005487 2.0e-26 122.5 107 55.1
Sc04g0006550 Simmondsia chinensis HOM05D000434 ORTHO05D005487 2.0e-26 122.5 107 57.0
Solyc05g009540.3 Solanum lycopersicum HOM05D000434 ORTHO05D005487 2.0e-26 122.5 107 55.1
Gohir.A13G053900 Gossypium hirsutum HOM05D000434 ORTHO05D005487 2.7e-26 122.1 107 57.0
Gohir.D13G071400 Gossypium hirsutum HOM05D000434 ORTHO05D005487 2.7e-26 122.1 107 57.0
Gorai.013G081700 Gossypium raimondii HOM05D000434 ORTHO05D005487 2.7e-26 122.1 107 57.0
Sp2g15070 Schrenkiella parvula HOM05D000434 ORTHO05D005487 2.7e-26 122.1 108 55.6
TAR374G1521 Trochodendron aralioides HOM05D000434 ORTHO05D005487 2.7e-26 122.1 107 56.1
Aqoxy5G04205 Aquilegia oxysepala HOM05D000434 ORTHO05D005487 3.5e-26 121.7 108 60.2
AL5G14460 Arabidopsis lyrata HOM05D000434 ORTHO05D005487 3.5e-26 121.7 108 55.6
Lalb_Chr17g0342041 Lupinus albus HOM05D000434 ORTHO05D005487 3.5e-26 121.7 107 56.1
PSO017G6446 Papaver somniferum HOM05D000434 ORTHO05D005487 3.5e-26 121.7 107 57.0
CSS0003626 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005487 4.5e-26 121.3 107 55.1
Ca_11184_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005487 4.5e-26 121.3 107 54.2
Sed0007294 Sechium edule HOM05D000434 ORTHO05D005487 4.5e-26 121.3 107 56.1
THA.LOC104825736 Tarenaya hassleriana HOM05D000434 ORTHO05D005487 4.5e-26 121.3 107 54.2
C07p34860 Brassica napus HOM05D000434 ORTHO05D005487 5.9e-26 120.9 108 56.5
CDE05G2965 Ceratophyllum demersum HOM05D000434 ORTHO05D005487 5.9e-26 120.9 107 57.0
Hund25082 Selenicereus undatus HOM05D000434 ORTHO05D005487 5.9e-26 120.9 107 55.1
PGSC0003DMG400012975 Solanum tuberosum HOM05D000434 ORTHO05D005487 5.9e-26 120.9 107 55.1
Thecc.02G357400 Theobroma cacao HOM05D000434 ORTHO05D005487 5.9e-26 120.9 107 55.1
Aa31LG2G6510 Aethionema arabicum HOM05D000434 ORTHO05D005487 7.7e-26 120.6 107 53.3
EL10Ac6g14439 Beta vulgaris HOM05D000434 ORTHO05D005487 7.7e-26 120.6 107 56.1
Thhalv10003622m.g Eutrema salsugineum HOM05D000434 ORTHO05D005487 7.7e-26 120.6 108 54.6
Lalb_Chr21g0309021 Lupinus albus HOM05D000434 ORTHO05D005487 7.7e-26 120.6 107 53.3
AT3G25840 Arabidopsis thaliana HOM05D000434 ORTHO05D005487 1.0e-25 120.2 108 54.6
HanXRQChr08g0214201 Helianthus annuus HOM05D000434 ORTHO05D005487 1.0e-25 120.2 107 55.1
Nitab4.5_0004895g0050 Nicotiana tabacum HOM05D000434 ORTHO05D005487 1.0e-25 120.2 106 54.7
Zm00001eb133880 Zea mays HOM05D000434 ORTHO05D005487 1.0e-25 120.2 107 55.1
BcaB07g30630 Brassica carinata HOM05D000434 ORTHO05D005487 1.3e-25 119.8 108 56.5
BcaC06g33949 Brassica carinata HOM05D000434 ORTHO05D005487 1.3e-25 119.8 108 56.5
A06p42450 Brassica napus HOM05D000434 ORTHO05D005487 1.3e-25 119.8 108 55.6
BraA06t27160Z Brassica rapa HOM05D000434 ORTHO05D005487 1.3e-25 119.8 108 55.6
Cpa.g.c32989 Carica papaya HOM05D000434 ORTHO05D005487 1.3e-25 119.8 107 54.2
Cpa.g.sc1.186 Carica papaya HOM05D000434 ORTHO05D005487 1.3e-25 119.8 107 54.2
Cfa018611 Carpinus fangiana HOM05D000434 ORTHO05D005487 1.3e-25 119.8 107 54.2
Lsat_1_v5_gn_8_39220 Lactuca sativa HOM05D000434 ORTHO05D005487 1.3e-25 119.8 107 55.1
TPR.G26286 Trifolium pratense HOM05D000434 ORTHO05D005487 1.3e-25 119.8 107 56.1
vmacro10548 Vaccinium macrocarpon HOM05D000434 ORTHO05D005487 1.3e-25 119.8 107 51.4
ATR0665G319 Amborella trichopoda HOM05D000434 ORTHO05D005487 1.7e-25 119.4 107 57.0
MBI19_g33767_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005487 1.7e-25 119.4 106 58.5
PSO478G4149 Papaver somniferum HOM05D000434 ORTHO05D005487 1.7e-25 119.4 107 56.1
GSVIVG01011916001 Vitis vinifera HOM05D000434 ORTHO05D005487 1.7e-25 119.4 107 55.1
CsaV3_5G034190 Cucumis sativus L. HOM05D000434 ORTHO05D005487 2.3e-25 119.0 105 57.1
Sed0025596 Sechium edule HOM05D000434 ORTHO05D005487 2.3e-25 119.0 107 55.1
AUR62002892 Chenopodium quinoa HOM05D000434 ORTHO05D005487 2.9e-25 118.6 108 52.8
Duzib248G1356 Durio zibethinus HOM05D000434 ORTHO05D005487 2.9e-25 118.6 107 54.2
Oeu033298.1 Olea europaea HOM05D000434 ORTHO05D005487 2.9e-25 118.6 107 53.3
Aa31LG1G1500 Aethionema arabicum HOM05D000434 ORTHO05D005487 3.8e-25 118.2 108 55.6
AUR62035250 Chenopodium quinoa HOM05D000434 ORTHO05D005487 3.8e-25 118.2 107 54.2
Migut.L01078 Erythranthe guttata HOM05D000434 ORTHO05D005487 3.8e-25 118.2 107 53.3
Sabra08G0090400 Salix brachista HOM05D000434 ORTHO05D005487 3.8e-25 118.2 107 53.3
BolC7t44018H Brassica oleracea HOM05D000434 ORTHO05D005487 5.0e-25 117.9 108 54.6
Carub.0005s0367 Capsella rubella HOM05D000434 ORTHO05D005487 5.0e-25 117.9 108 54.6
Medtr1g111180 Medicago truncatula HOM05D000434 ORTHO05D005487 6.5e-25 117.5 108 53.7
Phvul.003G043900 Phaseolus vulgaris HOM05D000434 ORTHO05D005487 6.5e-25 117.5 106 54.7
CAN.G656.26 Capsicum annuum HOM05D000434 ORTHO05D005487 8.6e-25 117.1 107 53.3
Dinv21107 Davidia involucrata HOM05D000434 ORTHO05D005487 8.6e-25 117.1 107 53.3
Potri.008G119100 Populus trichocarpa HOM05D000434 ORTHO05D005487 8.6e-25 117.1 107 53.3
Prupe.1G308700 Prunus persica HOM05D000434 ORTHO05D005487 8.6e-25 117.1 107 53.3
Eucgr.B03029 Eucalyptus grandis HOM05D000434 ORTHO05D005487 1.1e-24 116.7 108 54.6
SGA_v2.0_scaffold124G33549 Striga asiatica HOM05D000434 ORTHO05D005487 1.1e-24 116.7 107 53.3
Peaxi162Scf00382g00219 Petunia axillaris HOM05D000434 ORTHO05D005487 1.5e-24 116.3 107 53.3
Rhsim09G0109700 Rhododendron simsii HOM05D000434 ORTHO05D005487 1.5e-24 116.3 107 51.4
DCAR_007234 Daucus carota HOM05D000434 ORTHO05D005487 1.9e-24 115.9 107 51.4
Rhsim12G0082600 Rhododendron simsii HOM05D000434 ORTHO05D005487 1.9e-24 115.9 107 53.3
CiPaw.16G004900 Carya illinoinensis HOM05D000434 ORTHO05D005487 3.3e-24 115.2 105 54.3
SEGI_05979 Sequoiadendron giganteum HOM05D000434 ORTHO05D005487 3.3e-24 115.2 107 53.3
MD16G1044600 Malus domestica HOM05D000434 ORTHO05D005487 5.5e-24 114.4 107 54.2
Potri.010G126900 Populus trichocarpa HOM05D000434 ORTHO05D005487 7.2e-24 114.0 107 52.3
Zm00001eb033230 Zea mays HOM05D000434 ORTHO05D005487 7.2e-24 114.0 105 54.3
Lj6A761T52 Lonicera japonica HOM05D000434 ORTHO05D005487 9.5e-24 113.6 107 51.4
Migut.E00325 Erythranthe guttata HOM05D000434 ORTHO05D005487 1.6e-23 112.8 107 51.4
Sopen06g002630 Solanum pennellii HOM05D000434 ORTHO05D005487 2.1e-23 112.5 105 53.3
HPP92_009435 Vanilla planifolia HOM05D000434 ORTHO05D005487 2.1e-23 112.5 105 56.2
PGSC0003DMG400020660 Solanum tuberosum HOM05D000434 ORTHO05D005487 2.8e-23 112.1 105 53.3
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 3.6e-23 111.7 95 58.9
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 3.6e-23 111.7 95 58.9
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 3.6e-23 111.7 95 58.9
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 3.6e-23 111.7 95 58.9
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 3.6e-23 111.7 95 58.9
CiPaw.15G005700 Carya illinoinensis HOM05D000434 ORTHO05D005487 6.1e-23 110.9 105 52.4
Dinv04482 Davidia involucrata HOM05D000434 ORTHO05D005487 1.8e-22 109.4 96 54.2
MD13G1043800 Malus domestica HOM05D000434 ORTHO05D005487 1.8e-22 109.4 108 53.7
Haze_17463 Corylus avellana HOM05D000434 ORTHO05D005487 2.3e-22 109.0 122 47.5
Manes.06G070200 Manihot esculenta HOM05D000434 ORTHO05D005487 2.3e-22 109.0 105 54.3
arahy.Tifrunner.gnm1.ann1.11CPHY Arachis hypogaea HOM05D000434 ORTHO05D005487 3.0e-22 108.6 99 52.5
DCAR_026727 Daucus carota HOM05D000434 ORTHO05D005487 5.2e-22 107.8 107 50.5
vmacro01373 Vaccinium macrocarpon HOM05D000434 ORTHO05D005487 6.8e-22 107.5 112 49.1
Cc11_g10310 Coffea canephora HOM05D000434 ORTHO05D005487 2.0e-21 105.9 107 48.6
RcHm_v2.0_Chr4g0435481 Rosa chinensis HOM05D000434 ORTHO05D005487 2.6e-21 105.5 109 52.3
AT3G53640 Arabidopsis thaliana HOM05D000434 ORTHO05D005487 3.4e-21 105.1 108 50.9
AL5G34610 Arabidopsis lyrata HOM05D000434 ORTHO05D005487 4.4e-21 104.8 108 50.9
BcaC06g31112 Brassica carinata HOM05D000434 ORTHO05D005487 5.7e-21 104.4 98 54.1
Oeu057624.1 Olea europaea HOM05D000434 ORTHO05D005487 9.8e-21 103.6 97 54.6
AagrBONN_evm.TU.Sc2ySwM_368.1606 Anthoceros agrestis HOM05D000434 ORTHO05D005487 1.3e-20 103.2 108 50.9
AT1G13350 Arabidopsis thaliana HOM05D000434 ORTHO05D005487 1.7e-20 102.8 108 49.1
Carub.0005s2022 Capsella rubella HOM05D000434 ORTHO05D005487 1.7e-20 102.8 108 50.9
Sabra10G0096400 Salix brachista HOM05D000434 ORTHO05D005487 4.9e-20 101.3 96 51.0
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 6.3e-20 100.9 96 53.1
Pp3c15_9260 Physcomitrium patens HOM05D000434 ORTHO05D005487 6.3e-20 100.9 113 49.6
FvH4_4g27640 Fragaria vesca HOM05D000434 ORTHO05D005487 1.4e-19 99.8 109 50.5
PSO478G5095 Papaver somniferum HOM05D000434 ORTHO05D005487 1.2e-18 96.7 105 47.6
SMO367G0988 Selaginella moellendorffii HOM05D000434 ORTHO05D005487 2.0e-18 95.9 106 49.1
Pp3c9_3840 Physcomitrium patens HOM05D000434 ORTHO05D005487 5.9e-18 94.4 111 45.9
Nitab4.5_0003823g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005487 6.6e-17 90.9 85 51.8
Nn3g17801 Nelumbo nucifera HOM05D000434 ORTHO05D005487 7.3e-16 87.4 95 50.5
CSS0003031 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005487 2.8e-15 85.5 111 45.0
CBR_g38502 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-14 83.6 93 46.2
FAN12G0546 Fragaria x ananassa HOM05D000434 ORTHO05D005487 6.8e-14 80.9 96 45.8
FAN22G2294 Fragaria x ananassa HOM05D000434 ORTHO05D005487 6.8e-14 80.9 96 45.8
FAN07G0245 Fragaria x ananassa HOM05D000434 ORTHO05D005487 8.9e-14 80.5 91 47.3
FAN12G0730 Fragaria x ananassa HOM05D000434 ORTHO05D005487 3.2e-11 72.0 90 44.4
CAN.G17.22 Capsicum annuum HOM05D000434 ORTHO05D005487 4.1e-11 71.6 75 45.3
TAR622G0556 Trochodendron aralioides HOM05D001644 ORTHO05D005487 1.6e-10 69.7 85 44.7
MSTRG.825 Avicennia marina HOM05D000434 ORTHO05D005487 7.8e-10 67.4 67 47.8
PRCOL_00003126 Prasinoderma coloniale HOM05D000055 ORTHO05D005487 3.9e-09 65.1 109 39.4
SMO351G0064 Selaginella moellendorffii HOM05D001644 ORTHO05D005487 9.5e-08 60.5 104 33.7
SMO351G0350 Selaginella moellendorffii HOM05D000434 ORTHO05D005487 9.5e-08 60.5 104 33.7
SMO111G0170 Selaginella moellendorffii HOM05D001644 ORTHO05D005487 1.2e-07 60.1 104 33.7
CDE11G0725 Ceratophyllum demersum HOM05D000434 ORTHO05D005487 6.2e-07 57.8 47 57.4
MCO06G297 Micromonas commoda HOM05D000434 ORTHO05D005487 6.2e-07 57.8 108 29.6
unitig_699.g19888 Utricularia gibba HOM05D000434 ORTHO05D005487 8.0e-07 57.4 59 49.2


User provided reference genes

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