Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 6.9e-95 351.3 279 100.0
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 1.1e-39 167.9 296 64.9
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.4e-34 151.0 291 64.9
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 5.2e-34 149.1 291 61.5
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 1.3e-32 144.4 292 64.4
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 1.4e-31 141.0 288 56.6
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 1.8e-31 140.6 282 66.3
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.4e-31 140.2 289 64.0
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 3.2e-31 139.8 286 61.9
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 4.1e-31 139.4 286 65.4
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 7.0e-31 138.7 295 61.4
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 9.2e-31 138.3 282 65.2
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.7e-30 136.7 297 59.9
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 3.5e-30 136.3 279 67.4
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 3.5e-30 136.3 282 65.2
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 4.6e-30 136.0 290 63.4
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.7e-29 134.0 296 60.8
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 2.3e-29 133.7 290 62.4
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 3.0e-29 133.3 278 63.7
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 3.9e-29 132.9 288 60.8
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 3.9e-29 132.9 302 58.9
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 5.0e-29 132.5 285 61.1
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 6.6e-29 132.1 289 61.9
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 1.5e-28 131.0 280 62.1
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 1.5e-28 131.0 281 67.3
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 3.3e-28 129.8 252 69.4
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 5.6e-28 129.0 300 58.0
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 5.6e-28 129.0 289 63.0
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 7.3e-28 128.6 279 67.0
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 1.6e-27 127.5 283 60.4
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 2.1e-27 127.1 287 61.3
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 2.8e-27 126.7 296 54.7
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 2.8e-27 126.7 271 65.3
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 3.6e-27 126.3 283 62.5
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 1.1e-26 124.8 283 59.0
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 1.1e-26 124.8 283 59.4
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 1.4e-26 124.4 291 59.5
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 2.3e-26 123.6 323 57.3
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 3.1e-26 123.2 289 55.7
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 4.0e-26 122.9 254 64.2
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 5.2e-26 122.5 279 60.9
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 5.2e-26 122.5 281 56.9
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 6.8e-26 122.1 285 62.1
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 6.8e-26 122.1 249 68.3
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 8.9e-26 121.7 283 55.8
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 1.5e-25 120.9 282 55.7
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 1.5e-25 120.9 289 63.3
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.0e-25 120.6 156 68.6
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.0e-25 120.6 156 65.4
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 2.6e-25 120.2 247 59.9
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 3.4e-25 119.8 287 60.3
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 4.4e-25 119.4 282 60.6
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 4.4e-25 119.4 292 51.7
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 9.8e-25 118.2 287 60.6
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 9.8e-25 118.2 281 55.9
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 9.8e-25 118.2 284 62.3
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 1.7e-24 117.5 287 58.9
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 6.4e-24 115.5 289 55.0
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 6.4e-24 115.5 296 59.5
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 6.4e-24 115.5 260 48.5
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.9e-23 114.0 296 51.7
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.4e-23 113.6 296 51.7
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 5.4e-23 112.5 292 52.4
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 9.2e-23 111.7 279 57.3
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 1.2e-22 111.3 293 60.4
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 1.2e-22 111.3 286 43.4
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 2.7e-22 110.2 291 52.2
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 4.6e-22 109.4 306 46.7
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 6.0e-22 109.0 276 35.5
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 6.6e-21 105.5 160 69.4
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 6.6e-21 105.5 287 60.3
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 8.6e-21 105.1 280 56.8
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.3e-20 102.8 252 55.6
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 4.3e-20 102.8 293 56.3
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 9.5e-20 101.7 279 55.2
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.6e-19 100.9 315 48.9
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 2.1e-19 100.5 161 49.1
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.8e-19 100.1 289 55.7
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 2.8e-19 100.1 278 55.0
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 4.7e-19 99.4 293 51.2
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 4.7e-19 99.4 109 55.0
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.1e-18 98.2 279 54.8
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 1.4e-18 97.8 109 63.3
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 3.1e-18 96.7 251 54.6
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 8.9e-18 95.1 109 62.4
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 1.5e-17 94.4 107 56.1
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 1.5e-17 94.4 107 56.1
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 1.5e-17 94.4 112 56.2
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 2.0e-17 94.0 136 59.6
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 2.0e-17 94.0 287 56.4
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 5.8e-17 92.4 109 50.5
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 1.7e-16 90.9 109 48.6
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 1.7e-16 90.9 223 65.0
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 1.7e-16 90.9 295 52.5
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 5.4e-15 85.9 108 52.8
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 5.4e-15 85.9 108 52.8
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 5.1e-13 79.3 294 54.4
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 2.5e-12 77.0 109 44.0
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 1.5e-09 67.8 217 53.5
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 1.5e-09 67.8 42 66.7
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 3.4e-09 66.6 255 59.2
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 4.9e-08 62.8 41 63.4
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 1.9e-07 60.8 110 45.5
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 1.9e-07 60.8 140 64.3
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 1.6e-06 57.8 31 74.2
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 3.5e-06 56.6 104 46.2


User provided reference genes

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