Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03978 Aquilegia oxysepala HOM05D004362 ORTHO05D005650 1.4e-104 382.9 188 100.0
Aqoxy2G03013 Aquilegia oxysepala HOM05D004362 ORTHO05D005650 2.2e-97 359.0 188 91.0
PSO063G3233 Papaver somniferum HOM05D004362 ORTHO05D005650 7.9e-95 350.5 188 89.9
PSO170G0314 Papaver somniferum HOM05D004362 ORTHO05D005650 7.9e-95 350.5 188 89.9
PSO675G6259 Papaver somniferum HOM05D004362 ORTHO05D005650 7.9e-95 350.5 188 89.9
PSO541G6165 Papaver somniferum HOM05D004362 ORTHO05D005650 1.0e-94 350.1 188 89.4
TAR362G1261 Trochodendron aralioides HOM05D004362 ORTHO05D005650 1.5e-93 346.3 188 88.8
TAR633G1411 Trochodendron aralioides HOM05D004362 ORTHO05D005650 5.7e-93 344.4 188 88.3
Nn8g40841 Nelumbo nucifera HOM05D004362 ORTHO05D005650 2.8e-92 342.0 188 87.8
Nn4g25890 Nelumbo nucifera HOM05D004362 ORTHO05D005650 8.2e-92 340.5 188 87.8
Rhsim04G0220600 Rhododendron simsii HOM05D004362 ORTHO05D005650 2.6e-90 335.5 188 86.2
THA.LOC104820258 Tarenaya hassleriana HOM05D004362 ORTHO05D005650 7.7e-90 334.0 188 85.6
Actinidia01468 Actinidia chinensis HOM05D004362 ORTHO05D005650 1.0e-89 333.6 188 86.2
ATR0706G220 Amborella trichopoda HOM05D004362 ORTHO05D005650 1.3e-89 333.2 188 84.6
Sp7g14130 Schrenkiella parvula HOM05D004362 ORTHO05D005650 1.3e-89 333.2 188 86.2
vmacro08137 Vaccinium macrocarpon HOM05D004362 ORTHO05D005650 1.7e-89 332.8 188 85.6
DCAR_003777 Daucus carota HOM05D004362 ORTHO05D005650 2.2e-89 332.4 188 84.0
A03p49320 Brassica napus HOM05D004362 ORTHO05D005650 2.9e-89 332.0 188 85.6
BraA03t14033Z Brassica rapa HOM05D004362 ORTHO05D005650 2.9e-89 332.0 188 85.6
CANSAT11G1206 Cannabis sativa HOM05D004362 ORTHO05D005650 2.9e-89 332.0 188 84.0
CANSAT56G3245 Cannabis sativa HOM05D004362 ORTHO05D005650 2.9e-89 332.0 188 84.0
CARHR290260 Cardamine hirsuta HOM05D004362 ORTHO05D005650 3.8e-89 331.6 188 86.2
Hma1.2p1_0698F.1_g205210 Hydrangea macrophylla HOM05D004362 ORTHO05D005650 3.8e-89 331.6 188 85.1
MD17G1218500 Malus domestica HOM05D004362 ORTHO05D005650 3.8e-89 331.6 188 84.6
Prupe.3G093900 Prunus persica HOM05D004362 ORTHO05D005650 3.8e-89 331.6 188 84.0
MD03G1177300 Malus domestica HOM05D004362 ORTHO05D005650 5.0e-89 331.3 188 84.6
BcaC06g32960 Brassica carinata HOM05D004362 ORTHO05D005650 6.5e-89 330.9 188 85.1
BcaC07g37931 Brassica carinata HOM05D004362 ORTHO05D005650 6.5e-89 330.9 188 85.6
A08p11960 Brassica napus HOM05D004362 ORTHO05D005650 6.5e-89 330.9 188 85.6
C07p47390 Brassica napus HOM05D004362 ORTHO05D005650 6.5e-89 330.9 188 85.1
BolC1t02658H Brassica oleracea HOM05D004362 ORTHO05D005650 6.5e-89 330.9 188 85.6
BolC7t45266H Brassica oleracea HOM05D004362 ORTHO05D005650 6.5e-89 330.9 188 85.1
BraA08t33187Z Brassica rapa HOM05D004362 ORTHO05D005650 6.5e-89 330.9 188 85.6
Cpa.g.sc16.164 Carica papaya HOM05D004362 ORTHO05D005650 6.5e-89 330.9 188 84.0
Ciclev10005994m.g Citrus clementina HOM05D004362 ORTHO05D005650 6.5e-89 330.9 188 84.0
CiPaw.01G149400 Carya illinoinensis HOM05D004362 ORTHO05D005650 8.5e-89 330.5 188 83.5
A01p21760 Brassica napus HOM05D004362 ORTHO05D005650 1.1e-88 330.1 188 85.1
BraA01t02085Z Brassica rapa HOM05D004362 ORTHO05D005650 1.1e-88 330.1 188 85.1
CSS0031921 Camellia sinensis var. sinensis HOM05D004362 ORTHO05D005650 1.4e-88 329.7 188 84.6
CSS0044915 Camellia sinensis var. sinensis HOM05D004362 ORTHO05D005650 1.4e-88 329.7 188 84.6
BcaC06g32963 Brassica carinata HOM05D004362 ORTHO05D005650 1.9e-88 329.3 188 85.1
Aa31LG10G6340 Aethionema arabicum HOM05D004362 ORTHO05D005650 3.2e-88 328.6 188 84.0
Lj6P674T13 Lonicera japonica HOM05D004362 ORTHO05D005650 3.2e-88 328.6 188 84.6
MELO3C006657.2 Cucumis melo HOM05D004362 ORTHO05D005650 5.5e-88 327.8 188 83.5
FvH4_4g00380 Fragaria vesca HOM05D004362 ORTHO05D005650 5.5e-88 327.8 188 83.5
FAN22G1477 Fragaria x ananassa HOM05D004362 ORTHO05D005650 7.2e-88 327.4 188 83.5
RcHm_v2.0_Chr7g0221961 Rosa chinensis HOM05D004362 ORTHO05D005650 7.2e-88 327.4 188 83.0
Thhalv10026330m.g Eutrema salsugineum HOM05D004362 ORTHO05D005650 9.4e-88 327.0 188 84.0
FvH4_6g25030 Fragaria vesca HOM05D004362 ORTHO05D005650 1.2e-87 326.6 188 83.0
FAN17G1564 Fragaria x ananassa HOM05D004362 ORTHO05D005650 1.2e-87 326.6 188 83.0
BolC8t48316H Brassica oleracea HOM05D004362 ORTHO05D005650 1.6e-87 326.2 188 83.5
Cc00_g10540 Coffea canephora HOM05D004362 ORTHO05D005650 1.6e-87 326.2 188 84.0
CAN.G134.195 Capsicum annuum HOM05D004362 ORTHO05D005650 2.1e-87 325.9 188 83.0
CsaV3_3G014560 Cucumis sativus L. HOM05D004362 ORTHO05D005650 2.1e-87 325.9 188 83.0
RcHm_v2.0_Chr1g0332291 Rosa chinensis HOM05D004362 ORTHO05D005650 2.1e-87 325.9 188 82.4
TPR.G3221 Trifolium pratense HOM05D004362 ORTHO05D005650 2.1e-87 325.9 188 82.4
Eucgr.L03020 Eucalyptus grandis HOM05D004362 ORTHO05D005650 2.7e-87 325.5 188 82.4
Sed0020990 Sechium edule HOM05D004362 ORTHO05D005650 3.6e-87 325.1 188 81.4
Cfa015376 Carpinus fangiana HOM05D004362 ORTHO05D005650 4.7e-87 324.7 188 83.0
Haze_01219 Corylus avellana HOM05D004362 ORTHO05D005650 4.7e-87 324.7 188 83.0
PGR031G1479 Punica granatum HOM05D004362 ORTHO05D005650 4.7e-87 324.7 188 81.4
BcaC09g50269 Brassica carinata HOM05D004362 ORTHO05D005650 6.1e-87 324.3 190 84.2
C01p27110 Brassica napus HOM05D004362 ORTHO05D005650 6.1e-87 324.3 190 84.2
QL06p008685 Quercus lobata HOM05D004362 ORTHO05D005650 6.1e-87 324.3 187 81.8
Dinv29769 Davidia involucrata HOM05D004362 ORTHO05D005650 7.9e-87 323.9 180 86.7
CDE05G1737 Ceratophyllum demersum HOM05D004362 ORTHO05D005650 1.0e-86 323.6 188 81.4
VMungo1383G0988 Vigna mungo HOM05D004362 ORTHO05D005650 1.8e-86 322.8 188 80.3
Phvul.003G104500 Phaseolus vulgaris HOM05D004362 ORTHO05D005650 2.3e-86 322.4 188 80.3
Medtr3g112090 Medicago truncatula HOM05D004362 ORTHO05D005650 3.0e-86 322.0 188 80.9
Ca_15496_v3 Cicer arietinum L. HOM05D004362 ORTHO05D005650 3.9e-86 321.6 188 80.3
Peaxi162Scf00399g00066 Petunia axillaris HOM05D004362 ORTHO05D005650 3.9e-86 321.6 188 83.5
CDE05G0863 Ceratophyllum demersum HOM05D004362 ORTHO05D005650 5.2e-86 321.2 188 80.9
Nitab4.5_0000250g0130 Nicotiana tabacum HOM05D004362 ORTHO05D005650 5.2e-86 321.2 188 83.0
Sed0024198 Sechium edule HOM05D004362 ORTHO05D005650 6.7e-86 320.9 188 80.9
Atru.chr4.2815 Acer truncatum HOM05D004362 ORTHO05D005650 8.8e-86 320.5 188 80.9
Nitab4.5_0002393g0040 Nicotiana tabacum HOM05D004362 ORTHO05D005650 8.8e-86 320.5 188 82.4
AL7G39540 Arabidopsis lyrata HOM05D004362 ORTHO05D005650 1.5e-85 319.7 188 83.0
AT4G15770 Arabidopsis thaliana HOM05D004362 ORTHO05D005650 1.5e-85 319.7 188 83.0
Carub.0007s2590 Capsella rubella HOM05D004362 ORTHO05D005650 1.5e-85 319.7 188 83.0
HanXRQChr05g0151141 Helianthus annuus HOM05D004362 ORTHO05D005650 2.0e-85 319.3 188 81.9
Lj6g0015098 Lotus japonicus HOM05D004362 ORTHO05D005650 3.3e-85 318.5 188 80.3
Thecc.04G283400 Theobroma cacao HOM05D004362 ORTHO05D005650 3.3e-85 318.5 185 81.1
Gohir.D01G023472 Gossypium hirsutum HOM05D004362 ORTHO05D005650 4.4e-85 318.2 185 80.5
Gorai.002G028000 Gossypium raimondii HOM05D004362 ORTHO05D005650 4.4e-85 318.2 185 80.5
TWI53G0131 Tripterygium wilfordii HOM05D004362 ORTHO05D005650 4.4e-85 318.2 188 79.8
arahy.Tifrunner.gnm1.ann1.F4LE79 Arachis hypogaea HOM05D004362 ORTHO05D005650 7.4e-85 317.4 188 79.3
Duzib052G0564 Durio zibethinus HOM05D004362 ORTHO05D005650 7.4e-85 317.4 185 81.1
Glyma.05G031500 Glycine max HOM05D004362 ORTHO05D005650 7.4e-85 317.4 188 78.2
Glyma.17G095400 Glycine max HOM05D004362 ORTHO05D005650 7.4e-85 317.4 188 78.2
Duzib212G1021 Durio zibethinus HOM05D004362 ORTHO05D005650 9.7e-85 317.0 185 81.1
Manes.03G194200 Manihot esculenta HOM05D004362 ORTHO05D005650 9.7e-85 317.0 188 81.4
HanXRQChr15g0467261 Helianthus annuus HOM05D004362 ORTHO05D005650 1.3e-84 316.6 188 80.9
Solyc01g098100.2 Solanum lycopersicum HOM05D004362 ORTHO05D005650 1.3e-84 316.6 188 80.9
Sopen00g012890 Solanum pennellii HOM05D004362 ORTHO05D005650 1.3e-84 316.6 188 80.9
Sopen01g041670 Solanum pennellii HOM05D004362 ORTHO05D005650 1.3e-84 316.6 188 80.9
PGSC0003DMG400022496 Solanum tuberosum HOM05D004362 ORTHO05D005650 2.2e-84 315.8 188 80.3
ECA246G2248 Erigeron canadensis HOM05D004362 ORTHO05D005650 3.7e-84 315.1 188 79.8
Gohir.A01G031201 Gossypium hirsutum HOM05D004362 ORTHO05D005650 3.7e-84 315.1 185 80.0
Ca_21528_v3 Cicer arietinum L. HOM05D004362 ORTHO05D005650 4.8e-84 314.7 188 78.7
Lsat_1_v5_gn_7_66041 Lactuca sativa HOM05D004362 ORTHO05D005650 6.3e-84 314.3 188 79.8
Manes.15G013200 Manihot esculenta HOM05D004362 ORTHO05D005650 6.3e-84 314.3 188 80.9
Lalb_Chr07g0177681 Lupinus albus HOM05D004362 ORTHO05D005650 1.4e-83 313.2 188 78.2
TPR.G12330 Trifolium pratense HOM05D004362 ORTHO05D005650 3.1e-83 312.0 188 78.2
CDE05G2612 Ceratophyllum demersum HOM05D004362 ORTHO05D005650 4.1e-83 311.6 180 81.1
SEGI_37753 Sequoiadendron giganteum HOM05D004362 ORTHO05D005650 4.1e-83 311.6 188 77.7
FAN12G1395 Fragaria x ananassa HOM05D002675 ORTHO05D003322 5.3e-83 311.2 179 82.7
SalBow2G1272 Salvia bowleyana HOM05D004362 ORTHO05D005650 1.6e-82 309.7 189 81.0
SGA_v2.0_scaffold166G38354 Striga asiatica HOM05D004362 ORTHO05D005650 1.6e-82 309.7 189 81.5
unitig_88.g27714 Utricularia gibba HOM05D004362 ORTHO05D005650 2.0e-82 309.3 189 81.5
Psat7g055160 Pisum sativum HOM05D004362 ORTHO05D005650 2.6e-82 308.9 188 78.2
HPP92_025218 Vanilla planifolia HOM05D004362 ORTHO05D005650 3.5e-82 308.5 188 77.7
MSTRG.3927 Avicennia marina HOM05D004362 ORTHO05D005650 1.0e-81 307.0 189 79.9
Oeu027731.1 Olea europaea HOM05D004362 ORTHO05D005650 2.2e-81 305.8 189 78.3
Migut.G00171 Erythranthe guttata HOM05D004362 ORTHO05D005650 2.9e-81 305.4 189 80.4
SGA_v2.0_scaffold67G22647 Striga asiatica HOM05D004362 ORTHO05D005650 3.8e-81 305.1 188 79.3
BcaB04g18325 Brassica carinata HOM05D004362 ORTHO05D005650 2.5e-80 302.4 188 80.9
Potri.010G024400 Populus trichocarpa HOM05D004362 ORTHO05D005650 3.0e-78 295.4 188 75.5
Sabra10G0014700 Salix brachista HOM05D004362 ORTHO05D005650 5.2e-78 294.7 188 75.0
FAN02G1421 Fragaria x ananassa HOM05D004362 ORTHO05D005650 2.0e-77 292.7 174 80.5
Potri.008G209600 Populus trichocarpa HOM05D004362 ORTHO05D005650 2.0e-77 292.7 188 75.5
Ah.05g167830 Amaranthus hybridus HOM05D004362 ORTHO05D005650 2.6e-77 292.4 188 73.9
SHI00272 Sapria himalayana HOM05D004362 ORTHO05D005650 5.7e-77 291.2 188 73.4
arahy.Tifrunner.gnm1.ann1.U4RKM8 Arachis hypogaea HOM05D004362 ORTHO05D005650 1.3e-76 290.0 169 79.3
AUR62010283 Chenopodium quinoa HOM05D004362 ORTHO05D005650 2.4e-75 285.8 190 72.6
Sc19g0005120 Simmondsia chinensis HOM05D004362 ORTHO05D005650 4.1e-75 285.0 188 73.9
EL10Ac1g01907 Beta vulgaris HOM05D004362 ORTHO05D005650 7.0e-75 284.3 190 72.6
SMO361G0267 Selaginella moellendorffii HOM05D004362 ORTHO05D005650 1.0e-73 280.4 188 71.3
SMO361G0579 Selaginella moellendorffii HOM05D004362 ORTHO05D005650 1.0e-73 280.4 188 71.3
Pp3c15_15310 Physcomitrium patens HOM05D004362 ORTHO05D005650 3.8e-73 278.5 188 69.7
Mapoly0063s0083 Marchantia polymorpha HOM05D004362 ORTHO05D005650 2.5e-72 275.8 188 69.7
AagrBONN_evm.TU.Sc2ySwM_228.5155 Anthoceros agrestis HOM05D004362 ORTHO05D005650 2.7e-71 272.3 188 67.6
Lalb_Chr13g0303661 Lupinus albus HOM05D004362 ORTHO05D005650 2.3e-70 269.2 188 70.2
BcaC06g33449 Brassica carinata HOM05D004362 ORTHO05D005650 8.8e-70 267.3 177 75.7
Dinv44388 Davidia involucrata HOM05D004362 ORTHO05D005650 8.8e-70 267.3 188 72.3
GSVIVG01038238001 Vitis vinifera HOM05D004362 ORTHO05D005650 8.8e-70 267.3 188 73.4
AUR62039106 Chenopodium quinoa HOM05D004362 ORTHO05D005650 4.4e-69 265.0 179 70.9
MCO05G615 Micromonas commoda HOM05D004362 ORTHO05D005650 7.5e-69 264.2 187 67.4
EL10Ac1g01881 Beta vulgaris HOM05D004362 ORTHO05D005650 9.8e-69 263.8 179 71.5
CBR_g101 Chara braunii HOM05D004362 ORTHO05D005650 9.8e-69 263.8 189 66.1
GSVIVG01017749001 Vitis vinifera HOM05D004362 ORTHO05D005650 1.3e-68 263.5 188 72.3
Os07g0670600 Oryza sativa ssp. japonica HOM05D004362 ORTHO05D005650 1.1e-67 260.4 187 65.8
Zm00001eb257450 Zea mays HOM05D004362 ORTHO05D005650 4.1e-67 258.5 187 65.8
Psat0s12239g0040 Pisum sativum HOM05D004362 ORTHO05D005650 1.8e-62 243.0 181 66.3
Cre12.g528900 Chlamydomonas reinhardtii HOM05D004362 ORTHO05D005650 2.6e-61 239.2 188 58.0
PRCOL_00000387 Prasinoderma coloniale HOM05D004362 ORTHO05D005650 3.7e-60 235.3 177 62.7
Prupe.7G009000 Prunus persica HOM05D004362 ORTHO05D005650 1.9e-56 223.0 165 70.3
SEGI_14868 Sequoiadendron giganteum HOM05D004362 ORTHO05D005650 3.0e-54 215.7 188 60.1
Haze_26515 Corylus avellana HOM05D004362 ORTHO05D005650 7.8e-50 201.1 187 52.4
Oeu027660.1 Olea europaea HOM05D004362 ORTHO05D005650 5.2e-46 188.3 115 77.4
Psat5g016440 Pisum sativum HOM05D004362 ORTHO05D005650 1.1e-43 180.6 121 70.2
Psat7g055200 Pisum sativum HOM05D004362 ORTHO05D005650 1.9e-43 179.9 109 78.9
Eucgr.C01884 Eucalyptus grandis HOM05D004362 ORTHO05D191638 1.3e-41 173.7 123 72.4
SEGI_29823 Sequoiadendron giganteum HOM05D004362 ORTHO05D000001 2.8e-39 166.0 127 63.8
FAN05G2426 Fragaria x ananassa HOM05D004362 ORTHO05D005650 1.1e-38 164.1 173 53.2
Actinidia40262 Actinidia chinensis HOM05D004362 ORTHO05D005650 3.1e-38 162.5 85 91.8
FAN14G4293 Fragaria x ananassa HOM05D004362 ORTHO05D005650 8.9e-38 161.0 188 49.5
TPR.G35112 Trifolium pratense HOM05D004362 ORTHO05D005650 3.6e-31 139.0 79 81.0
BcaC02g09747 Brassica carinata HOM05D004362 ORTHO05D094801 3.0e-25 119.4 92 67.4
Psat4g036040 Pisum sativum HOM05D004362 ORTHO05D327968 9.0e-22 107.8 64 78.1
Prupe.7G008800 Prunus persica HOM05D004362 ORTHO05D334194 1.6e-10 70.5 35 91.4
EL10Ac2g03799 Beta vulgaris HOM05D004362 ORTHO05D090253 3.3e-08 62.8 42 66.7


User provided reference genes

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