Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 1.0e-106 390.6 282 100.0
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 1.9e-63 246.9 282 75.2
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 2.7e-62 243.0 285 69.1
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 6.0e-62 241.9 290 68.3
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 7.8e-62 241.5 284 73.9
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 1.0e-61 241.1 281 74.7
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 2.3e-61 240.0 287 71.4
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 2.3e-61 240.0 286 71.0
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 3.9e-61 239.2 283 74.9
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 6.6e-61 238.4 287 72.1
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 8.6e-61 238.0 283 73.9
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 1.9e-60 236.9 285 72.3
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 1.9e-60 236.9 284 75.0
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 3.3e-60 236.1 280 74.3
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 5.6e-60 235.3 282 72.7
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 7.3e-60 235.0 287 69.0
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 9.5e-60 234.6 283 73.5
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 9.5e-60 234.6 285 70.5
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 9.5e-60 234.6 285 69.8
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 2.8e-59 233.0 286 70.3
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 2.8e-59 233.0 272 76.5
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 3.6e-59 232.6 226 82.3
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 3.6e-59 232.6 221 87.3
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 6.2e-59 231.9 283 73.5
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 1.1e-58 231.1 216 87.0
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 1.1e-58 231.1 216 87.0
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 1.8e-58 230.3 287 71.8
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 3.1e-58 229.6 292 69.2
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 3.1e-58 229.6 280 70.4
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 5.2e-58 228.8 282 62.8
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 8.9e-58 228.0 226 83.6
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 8.9e-58 228.0 226 83.6
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 1.2e-57 227.6 281 72.2
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 2.0e-57 226.9 282 73.4
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 4.4e-57 225.7 226 81.0
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 9.8e-57 224.6 293 68.9
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 9.8e-57 224.6 242 74.4
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 9.8e-57 224.6 279 63.1
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 9.8e-57 224.6 281 73.0
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 1.7e-56 223.8 222 84.2
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 1.7e-56 223.8 284 71.5
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 2.2e-56 223.4 222 83.8
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 2.2e-56 223.4 289 68.2
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 2.9e-56 223.0 283 71.7
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 8.3e-56 221.5 282 73.4
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 8.3e-56 221.5 279 67.7
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 1.4e-55 220.7 223 82.5
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 1.4e-55 220.7 219 84.0
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 7.1e-55 218.4 288 70.8
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 7.1e-55 218.4 286 65.7
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 7.1e-55 218.4 217 82.5
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 9.2e-55 218.0 286 62.6
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 1.6e-54 217.2 310 44.8
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 2.7e-54 216.5 244 77.0
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 3.5e-54 216.1 285 70.5
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 6.0e-54 215.3 284 70.1
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 1.0e-53 214.5 269 71.0
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 1.7e-53 213.8 224 80.4
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 1.7e-53 213.8 231 63.6
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 1.7e-53 213.8 281 67.3
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 3.9e-53 212.6 290 70.3
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 5.1e-53 212.2 282 69.1
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 5.1e-53 212.2 273 72.2
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 5.1e-53 212.2 273 72.2
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 8.6e-53 211.5 208 88.9
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.9e-52 210.3 279 68.5
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 2.5e-52 209.9 289 68.5
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 2.5e-52 209.9 290 69.3
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 4.3e-52 209.1 230 63.9
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 4.3e-52 209.1 287 69.0
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 5.6e-52 208.8 289 67.8
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 7.3e-52 208.4 283 68.9
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 9.5e-52 208.0 282 68.8
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 2.1e-51 206.8 228 68.0
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 2.1e-51 206.8 277 69.0
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 2.8e-51 206.5 278 68.3
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 2.8e-51 206.5 219 80.8
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 4.7e-51 205.7 368 41.8
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 4.7e-51 205.7 194 85.1
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 1.1e-50 204.5 214 70.6
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 2.6e-49 199.9 252 54.0
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 5.8e-49 198.7 194 86.1
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 1.3e-48 197.6 191 77.5
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 2.9e-48 196.4 243 65.0
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 9.6e-44 181.4 181 81.2
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 4.7e-43 179.1 218 64.2
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 1.1e-42 177.9 211 64.9
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 4.0e-42 176.0 209 76.6
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 5.6e-36 155.6 80 90.0
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 5.6e-36 155.6 80 90.0
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 7.3e-36 155.2 80 91.2
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 6.9e-34 148.7 80 87.5
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 6.9e-34 148.7 215 48.8
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 4.4e-33 146.0 194 59.8
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 9.9e-33 144.8 80 85.0
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 9.9e-33 144.8 80 85.0
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 9.9e-33 144.8 80 87.5
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 8.4e-32 141.7 78 84.6
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 7.9e-30 135.2 242 41.7
Cfa012777 Carpinus fangiana HOM05D007062 ORTHO05D008941 2.1e-27 127.1 218 72.5
Psat2g178680 Pisum sativum HOM05D007062 ORTHO05D008941 4.0e-26 122.9 217 71.4
GSVIVG01001268001 Vitis vinifera HOM05D007062 ORTHO05D008941 2.6e-25 120.2 131 55.0
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 4.2e-23 112.8 179 65.4
Nn6g34047 Nelumbo nucifera HOM05D007062 ORTHO05D008941 2.7e-22 110.2 132 54.5
CDE04G0607 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 3.3e-20 103.2 72 73.6
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 7.6e-17 92.0 57 84.2
CAN.G1293.1 Capsicum annuum HOM05D007062 ORTHO05D008941 1.3e-16 91.3 110 49.1
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 6.0e-14 82.4 186 50.5
Lj8A257G61 Lonicera japonica HOM05D007062 ORTHO05D008941 8.7e-13 78.6 45 82.2
COL.COLO4_37221 Corchorus olitorius HOM05D007062 ORTHO05D008941 9.6e-12 75.1 69 59.4
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 2.6e-09 67.0 44 68.2
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.9e-07 60.8 54 59.3


User provided reference genes

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