Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 4.5e-208 727.6 355 100.0
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 5.1e-159 564.7 363 78.5
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 1.3e-122 443.7 329 65.3
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 5.5e-121 438.3 357 61.9
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 2.7e-120 436.0 363 60.1
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 2.7e-120 436.0 368 59.5
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 6.7e-119 431.4 333 62.5
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 3.3e-118 429.1 329 63.8
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 5.6e-118 428.3 354 59.9
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 2.1e-117 426.4 345 61.4
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 2.8e-117 426.0 355 59.2
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 6.2e-117 424.9 333 61.0
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.1e-116 424.1 350 60.9
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 1.8e-116 423.3 327 63.0
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 3.1e-116 422.5 355 58.9
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 5.3e-116 421.8 353 59.8
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 5.3e-116 421.8 337 60.5
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 1.5e-115 420.2 345 58.6
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 7.6e-115 417.9 353 58.4
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 7.6e-115 417.9 337 61.1
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 7.6e-115 417.9 356 58.1
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.0e-114 417.5 348 58.3
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 2.2e-114 416.4 350 58.3
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 3.8e-114 415.6 335 60.9
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 3.8e-114 415.6 345 60.0
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 1.9e-113 413.3 370 56.8
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 1.9e-113 413.3 352 59.4
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 3.2e-113 412.5 347 59.1
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 5.5e-113 411.8 348 58.9
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 9.3e-113 411.0 321 60.7
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.2e-112 410.6 348 58.6
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 3.5e-112 409.1 348 58.6
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 1.0e-111 407.5 362 56.4
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 1.8e-111 406.8 334 59.3
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 3.0e-111 406.0 352 57.4
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 3.0e-111 406.0 339 58.7
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.9e-111 405.6 321 58.3
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 5.1e-111 405.2 329 58.7
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 1.1e-110 404.1 327 57.2
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.1e-110 404.1 351 58.4
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 1.5e-110 403.7 347 57.9
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 2.5e-110 402.9 361 54.8
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 2.5e-110 402.9 361 54.8
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 2.5e-110 402.9 360 56.4
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 4.3e-110 402.1 327 58.7
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 5.7e-110 401.7 364 56.3
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 5.7e-110 401.7 336 61.6
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 7.4e-110 401.4 310 62.6
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 1.3e-109 400.6 356 56.7
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 1.6e-109 400.2 335 60.0
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 8.2e-109 397.9 357 55.2
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 8.2e-109 397.9 347 58.5
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 1.1e-108 397.5 353 55.8
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 1.4e-108 397.1 370 53.2
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 1.8e-108 396.7 352 56.0
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 3.1e-108 396.0 330 57.3
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 5.3e-108 395.2 329 56.8
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 5.3e-108 395.2 310 59.0
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 9.0e-108 394.4 341 58.1
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 1.2e-107 394.0 325 60.9
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 2.6e-107 392.9 398 51.8
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 3.4e-107 392.5 355 55.2
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 4.5e-107 392.1 310 59.0
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 5.9e-107 391.7 325 56.9
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 7.7e-107 391.3 343 57.7
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 7.7e-107 391.3 321 58.6
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 2.2e-106 389.8 333 55.9
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 2.9e-106 389.4 334 57.2
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 5.0e-106 388.7 324 58.3
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 5.0e-106 388.7 315 57.1
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 5.0e-106 388.7 360 56.1
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 6.5e-106 388.3 317 58.4
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 8.5e-106 387.9 345 57.1
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 1.9e-105 386.7 333 56.2
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 3.2e-105 386.0 327 57.5
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 4.2e-105 385.6 325 57.2
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 5.5e-105 385.2 331 58.3
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 3.6e-104 382.5 360 54.7
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 6.1e-104 381.7 337 57.9
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 3.9e-103 379.0 294 61.9
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.3e-102 375.9 366 53.8
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 4.3e-102 375.6 335 54.0
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 5.7e-102 375.2 361 55.1
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 1.7e-101 373.6 322 56.8
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 4.8e-101 372.1 404 50.5
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 6.3e-101 371.7 366 52.2
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 8.2e-101 371.3 345 51.3
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 1.4e-100 370.5 390 51.3
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 1.8e-100 370.2 304 60.5
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 1.8e-100 370.2 274 63.9
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.5e-99 367.1 321 55.8
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 4.5e-99 365.5 333 57.4
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.3e-98 364.0 341 53.7
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 3.8e-98 362.5 275 63.6
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 3.8e-98 362.5 278 62.2
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 5.5e-97 358.6 339 53.7
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 4.7e-96 355.5 280 61.1
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 1.0e-95 354.4 341 54.3
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 2.6e-94 349.7 322 56.2
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 7.4e-94 348.2 324 54.3
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 7.7e-91 338.2 278 60.1
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 9.4e-89 331.3 354 50.3
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 4.7e-88 328.9 365 49.0
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 5.2e-87 325.5 304 51.0
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.6e-83 313.2 358 47.2
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 4.5e-83 312.4 281 53.7
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 3.2e-81 306.2 336 51.5
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 6.8e-79 298.5 292 50.3
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 3.5e-75 286.2 395 42.3
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 7.2e-73 278.5 243 58.4
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 3.6e-72 276.2 308 47.7
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 3.1e-68 263.1 298 44.3
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 5.0e-66 255.8 228 55.7
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 5.7e-62 242.3 213 53.5
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 8.6e-58 228.4 300 38.3
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 8.6e-58 228.4 298 39.9
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 1.4e-52 211.1 283 39.9
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 3.2e-52 209.9 260 43.5
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 6.8e-47 192.2 292 38.0
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 2.1e-40 170.6 129 61.2
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 4.0e-39 166.4 146 56.2
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 3.3e-25 120.2 90 61.1
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 2.0e-22 110.9 194 35.1
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 2.6e-22 110.5 82 59.8
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.9e-20 104.4 69 65.2
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 4.3e-09 66.6 64 54.7
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 1.6e-08 64.7 61 42.6
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.8e-07 61.2 90 41.1
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 2.6e-06 57.4 42 59.5


User provided reference genes

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