Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 4.4e-211 737.6 361 100.0
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 1.1e-158 563.5 363 78.5
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 3.4e-134 482.3 327 69.4
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 5.9e-131 471.5 355 65.1
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 1.1e-129 467.2 334 68.9
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 1.9e-129 466.5 345 64.9
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 2.5e-129 466.1 331 66.8
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.4e-127 460.3 353 64.0
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 4.0e-127 458.8 345 64.9
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 4.0e-127 458.8 333 66.1
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 6.8e-127 458.0 353 63.7
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 2.0e-126 456.4 365 62.5
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.4e-126 455.7 350 63.1
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 3.4e-126 455.7 345 63.8
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 8.3e-125 451.1 318 66.7
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 3.1e-124 449.1 332 66.3
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 4.1e-124 448.7 325 65.8
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 9.2e-124 447.6 342 62.3
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 1.6e-123 446.8 351 62.1
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 4.5e-123 445.3 325 65.5
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 2.3e-122 443.0 380 60.0
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 2.9e-122 442.6 354 64.1
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 5.0e-122 441.8 385 57.1
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 1.1e-121 440.7 315 67.9
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.5e-121 440.3 359 63.5
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 4.3e-121 438.7 331 63.1
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 5.6e-121 438.3 357 63.0
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 7.3e-121 438.0 358 60.9
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 1.2e-120 437.2 342 61.4
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 1.6e-120 436.8 359 60.2
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 1.6e-120 436.8 394 57.4
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.8e-120 436.0 354 63.6
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 3.6e-120 435.6 355 60.6
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 4.7e-120 435.3 389 57.6
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 6.1e-120 434.9 347 60.8
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.0e-119 434.1 363 59.8
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 1.4e-119 433.7 354 60.2
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 2.3e-119 433.0 332 63.0
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 5.2e-119 431.8 341 62.2
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 5.2e-119 431.8 355 60.0
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 5.2e-119 431.8 316 64.6
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 6.8e-119 431.4 338 62.4
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 8.9e-119 431.0 324 64.2
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 1.5e-118 430.3 316 63.6
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 1.5e-118 430.3 352 58.5
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 2.0e-118 429.9 324 63.9
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.6e-118 429.5 370 59.2
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 2.6e-118 429.5 349 60.7
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 3.4e-118 429.1 353 59.8
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 3.4e-118 429.1 316 64.2
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 5.7e-118 428.3 323 63.2
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 5.7e-118 428.3 354 59.3
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 7.5e-118 427.9 361 59.3
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 7.5e-118 427.9 343 60.9
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 7.5e-118 427.9 344 59.6
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 1.7e-117 426.8 353 58.9
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 2.2e-117 426.4 348 60.3
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 2.2e-117 426.4 352 59.1
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 2.9e-117 426.0 352 59.7
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 1.1e-116 424.1 363 59.2
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 1.1e-116 424.1 341 60.7
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.4e-116 423.7 317 64.4
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.8e-116 423.3 338 61.2
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 5.4e-116 421.8 317 64.4
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 5.4e-116 421.8 337 61.7
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 1.2e-115 420.6 327 61.8
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.2e-115 420.6 349 59.9
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 1.2e-115 420.6 344 58.4
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 3.5e-115 419.1 329 62.3
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 3.5e-115 419.1 318 63.5
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 5.9e-115 418.3 335 63.9
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 5.9e-115 418.3 351 59.3
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 7.8e-115 417.9 358 58.9
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 7.8e-115 417.9 358 58.9
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.0e-114 417.5 352 57.4
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 3.0e-114 416.0 320 61.9
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 5.0e-114 415.2 379 56.2
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 6.6e-114 414.8 362 58.6
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 1.1e-113 414.1 359 57.4
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 7.3e-113 411.4 341 60.7
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 1.2e-112 410.6 297 66.0
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 3.6e-112 409.1 379 57.8
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 3.6e-112 409.1 338 58.3
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 6.2e-112 408.3 373 56.3
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 6.2e-112 408.3 274 69.7
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 1.0e-111 407.5 350 60.0
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 2.3e-111 406.4 352 59.1
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 8.9e-111 404.4 330 61.2
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 1.5e-110 403.7 275 68.7
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 3.4e-110 402.5 334 58.4
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 4.4e-110 402.1 317 59.6
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 4.4e-110 402.1 301 63.5
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 4.1e-108 395.6 335 58.2
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 9.2e-108 394.4 343 56.3
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 2.0e-107 393.3 280 66.1
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 3.5e-107 392.5 383 56.9
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 4.6e-107 392.1 341 58.4
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 1.1e-103 380.9 327 59.9
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 2.2e-101 373.2 314 59.9
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 2.1e-99 366.7 336 56.2
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 7.8e-99 364.8 324 58.3
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 1.1e-97 360.9 352 54.0
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 4.3e-97 359.0 332 54.8
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.7e-93 347.1 314 53.5
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 1.4e-92 344.0 301 54.2
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 1.7e-90 337.0 291 56.7
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 3.1e-87 326.2 378 48.4
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 1.4e-84 317.4 297 53.5
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 2.3e-82 310.1 325 51.4
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 1.1e-76 291.2 314 50.6
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 4.2e-76 289.3 298 48.7
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 2.8e-72 276.6 226 62.4
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 1.7e-69 267.3 224 58.0
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 2.2e-69 266.9 213 58.2
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.7e-64 249.6 301 42.2
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 9.0e-63 245.0 302 39.4
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 1.9e-60 237.3 291 44.0
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 2.3e-58 230.3 269 46.1
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 3.6e-51 206.5 299 38.1
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 7.7e-46 188.7 125 68.8
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 4.5e-38 162.9 148 55.4
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 7.0e-31 139.0 90 70.0
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 6.5e-29 132.5 85 69.4
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 5.2e-26 122.9 199 35.2
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 3.7e-24 116.7 69 72.5
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.1e-11 74.3 75 50.7
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 2.8e-08 63.9 42 61.9
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 2.4e-07 60.8 77 39.0


User provided reference genes

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