Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02722 Aquilegia oxysepala HOM05D000068 ORTHO05D016561 1.0e-71 273.5 160 100.0
Aqoxy2G01999 Aquilegia oxysepala HOM05D000068 ORTHO05D003956 9.2e-52 207.2 126 99.2
CSS0015971 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D003956 2.3e-34 149.4 133 57.9
TAR623G1155 Trochodendron aralioides HOM05D000068 ORTHO05D003956 3.0e-34 149.1 129 58.9
TAR369G0271 Trochodendron aralioides HOM05D000068 ORTHO05D003956 5.1e-34 148.3 128 59.4
Nn2g12881 Nelumbo nucifera HOM05D000068 ORTHO05D003956 8.7e-34 147.5 127 58.3
ATR0033G039 Amborella trichopoda HOM05D000068 ORTHO05D003956 3.3e-33 145.6 127 59.1
CDE09G1026 Ceratophyllum demersum HOM05D000068 ORTHO05D003956 3.3e-33 145.6 127 58.3
Migut.F01521 Erythranthe guttata HOM05D000068 ORTHO05D003956 7.3e-33 144.4 132 57.6
Actinidia34347 Actinidia chinensis HOM05D000068 ORTHO05D003956 1.6e-32 143.3 129 55.8
GSVIVG01025040001 Vitis vinifera HOM05D000068 ORTHO05D003956 1.6e-32 143.3 149 51.0
Aqoxy4G03027 Aquilegia oxysepala HOM05D000068 ORTHO05D003956 2.1e-32 142.9 130 56.2
DCAR_015215 Daucus carota HOM05D000068 ORTHO05D003956 2.8e-32 142.5 127 57.5
CDE02G1090 Ceratophyllum demersum HOM05D000068 ORTHO05D003956 3.6e-32 142.1 127 56.7
Dinv31417 Davidia involucrata HOM05D000068 ORTHO05D003956 3.6e-32 142.1 127 56.7
vmacro07146 Vaccinium macrocarpon HOM05D000068 ORTHO05D003956 3.6e-32 142.1 129 58.1
Nn2g10493 Nelumbo nucifera HOM05D000068 ORTHO05D003956 4.8e-32 141.7 130 56.9
Hma1.2p1_0402F.1_g144950 Hydrangea macrophylla HOM05D000068 ORTHO05D003956 6.2e-32 141.4 129 58.9
PSO206G0002 Papaver somniferum HOM05D000068 ORTHO05D003956 8.1e-32 141.0 129 69.8
PSO339G6153 Papaver somniferum HOM05D000068 ORTHO05D003956 8.1e-32 141.0 129 56.6
MBI05_g08788_MAGBIO Magnolia biondii HOM05D000068 ORTHO05D003956 1.1e-31 140.6 129 55.8
Rhsim03G0127200 Rhododendron simsii HOM05D000068 ORTHO05D003956 1.4e-31 140.2 137 53.3
Lj8A89T28 Lonicera japonica HOM05D000068 ORTHO05D003956 3.1e-31 139.0 128 55.5
Psat3g184480 Pisum sativum HOM05D000068 ORTHO05D003956 3.1e-31 139.0 130 54.6
Cfa001528 Carpinus fangiana HOM05D000068 ORTHO05D003956 4.0e-31 138.7 129 56.6
Cc02_g08390 Coffea canephora HOM05D000068 ORTHO05D003956 6.9e-31 137.9 130 56.9
Nitab4.5_0002655g0040 Nicotiana tabacum HOM05D000068 ORTHO05D003956 6.9e-31 137.9 128 54.7
PSO384G2617 Papaver somniferum HOM05D000068 ORTHO05D003956 9.0e-31 137.5 139 53.2
Nitab4.5_0000426g0090 Nicotiana tabacum HOM05D000068 ORTHO05D003956 1.2e-30 137.1 128 53.9
SGA_v2.0_scaffold108G31011 Striga asiatica HOM05D000068 ORTHO05D003956 1.2e-30 137.1 133 54.9
CAN.G1557.13 Capsicum annuum HOM05D000068 ORTHO05D003956 1.5e-30 136.7 128 55.5
ECA238G1581 Erigeron canadensis HOM05D000068 ORTHO05D003956 1.5e-30 136.7 130 54.6
CiPaw.01G282400 Carya illinoinensis HOM05D000068 ORTHO05D003956 2.0e-30 136.3 128 53.9
Peaxi162Scf00060g00438 Petunia axillaris HOM05D000068 ORTHO05D003956 2.0e-30 136.3 130 53.8
SalBow6G0152 Salvia bowleyana HOM05D000068 ORTHO05D003956 2.0e-30 136.3 129 56.6
Sopen04g005490 Solanum pennellii HOM05D000068 ORTHO05D003956 2.0e-30 136.3 128 55.5
PSO339G0013 Papaver somniferum HOM05D000068 ORTHO05D003956 2.6e-30 136.0 136 53.7
MSTRG.309 Avicennia marina HOM05D000068 ORTHO05D003956 4.5e-30 135.2 133 55.6
AL4G36870 Arabidopsis lyrata HOM05D000068 ORTHO05D003956 5.8e-30 134.8 133 54.9
Gohir.D04G061700 Gossypium hirsutum HOM05D000068 ORTHO05D003956 5.8e-30 134.8 130 54.6
Lalb_Chr17g0336261 Lupinus albus HOM05D000068 ORTHO05D003956 5.8e-30 134.8 129 56.6
MD07G1191100 Malus domestica HOM05D000068 ORTHO05D003956 5.8e-30 134.8 111 60.4
QL08p058678 Quercus lobata HOM05D000068 ORTHO05D003956 5.8e-30 134.8 131 55.0
Potri.010G210100 Populus trichocarpa HOM05D000068 ORTHO05D003956 7.6e-30 134.4 127 63.0
RcHm_v2.0_Chr1g0365761 Rosa chinensis HOM05D000068 ORTHO05D003956 7.6e-30 134.4 121 56.2
Sabra08G0035800 Salix brachista HOM05D000068 ORTHO05D003956 7.6e-30 134.4 127 63.0
TWI63G0814 Tripterygium wilfordii HOM05D000068 ORTHO05D003956 7.6e-30 134.4 132 53.8
HanXRQChr14g0457711 Helianthus annuus HOM05D000068 ORTHO05D003956 9.9e-30 134.0 132 52.3
Hund12553 Selenicereus undatus HOM05D000068 ORTHO05D003956 9.9e-30 134.0 129 55.0
Sabra10G0162400 Salix brachista HOM05D000068 ORTHO05D003956 1.3e-29 133.7 127 63.0
unitig_747.g21788 Utricularia gibba HOM05D000068 ORTHO05D003956 1.3e-29 133.7 134 51.5
CARHR165300 Cardamine hirsuta HOM05D000068 ORTHO05D003956 1.7e-29 133.3 135 60.0
DCAR_027678 Daucus carota HOM05D000068 ORTHO05D003956 1.7e-29 133.3 128 53.1
FAN01G0364 Fragaria x ananassa HOM05D000068 ORTHO05D003956 1.7e-29 133.3 115 58.3
FAN10G0082 Fragaria x ananassa HOM05D000068 ORTHO05D003956 1.7e-29 133.3 115 58.3
Ca_07205_v3 Cicer arietinum L. HOM05D000068 ORTHO05D003956 2.2e-29 132.9 130 56.9
Gorai.011G252900 Gossypium raimondii HOM05D000068 ORTHO05D003956 2.2e-29 132.9 135 60.7
Gorai.012G069000 Gossypium raimondii HOM05D000068 ORTHO05D003956 2.2e-29 132.9 130 54.6
Sc20g0002500 Simmondsia chinensis HOM05D000068 ORTHO05D003956 2.2e-29 132.9 128 63.3
Oeu059706.1 Olea europaea HOM05D000068 ORTHO05D016561 2.9e-29 132.5 127 54.3
HPP92_001487 Vanilla planifolia HOM05D000068 ORTHO05D003956 2.9e-29 132.5 130 53.8
AT3G55320 Arabidopsis thaliana HOM05D000068 ORTHO05D003956 4.9e-29 131.7 136 55.9
SEGI_33379 Sequoiadendron giganteum HOM05D000068 ORTHO05D003956 4.9e-29 131.7 128 55.5
THA.LOC104810015 Tarenaya hassleriana HOM05D000068 ORTHO05D003956 4.9e-29 131.7 135 57.8
Thecc.10G052400 Theobroma cacao HOM05D000068 ORTHO05D003956 4.9e-29 131.7 135 60.7
Sed0007890 Sechium edule HOM05D000068 ORTHO05D003956 6.4e-29 131.3 127 56.7
Hund20005 Selenicereus undatus HOM05D000068 ORTHO05D003956 6.4e-29 131.3 128 54.7
AT2G39480 Arabidopsis thaliana HOM05D000068 ORTHO05D003956 8.4e-29 131.0 137 51.1
C03p26240 Brassica napus HOM05D000068 ORTHO05D003956 8.4e-29 131.0 131 55.0
BolC3t15008H Brassica oleracea HOM05D000068 ORTHO05D003956 8.4e-29 131.0 131 55.0
C04p08170 Brassica napus HOM05D000068 ORTHO05D003956 1.1e-28 130.6 134 59.0
BolC4t22427H Brassica oleracea HOM05D000068 ORTHO05D003956 1.1e-28 130.6 134 59.0
AUR62022519 Chenopodium quinoa HOM05D000068 ORTHO05D003956 1.1e-28 130.6 127 58.3
Haze_17013 Corylus avellana HOM05D000068 ORTHO05D003956 1.1e-28 130.6 129 63.6
Thhalv10016145m.g Eutrema salsugineum HOM05D000068 ORTHO05D003956 1.1e-28 130.6 133 54.1
Gohir.D10G222500 Gossypium hirsutum HOM05D000068 ORTHO05D003956 1.1e-28 130.6 135 66.7
Lalb_Chr04g0257921 Lupinus albus HOM05D000068 ORTHO05D003956 1.1e-28 130.6 128 59.4
TWI15G0634 Tripterygium wilfordii HOM05D000068 ORTHO05D003956 1.1e-28 130.6 129 51.9
HPP92_021166 Vanilla planifolia HOM05D000068 ORTHO05D003956 1.1e-28 130.6 134 50.7
SHI22527 Sapria himalayana HOM05D000068 ORTHO05D003956 1.4e-28 130.2 128 48.4
Aa31LG10G10310 Aethionema arabicum HOM05D000068 ORTHO05D003956 1.9e-28 129.8 135 49.6
Aa31LG5G20120 Aethionema arabicum HOM05D000068 ORTHO05D003956 1.9e-28 129.8 134 50.0
Ah.10g033200 Amaranthus hybridus HOM05D000068 ORTHO05D003956 1.9e-28 129.8 127 56.7
FvH4_7g21390 Fragaria vesca HOM05D000068 ORTHO05D003956 1.9e-28 129.8 137 49.6
GSVIVG01016617001 Vitis vinifera HOM05D000068 ORTHO05D003956 1.9e-28 129.8 111 59.5
EL10Ac2g03452 Beta vulgaris HOM05D000068 ORTHO05D003956 2.4e-28 129.4 129 65.1
Carub.0004s2155 Capsella rubella HOM05D000068 ORTHO05D003956 2.4e-28 129.4 133 51.9
Atru.chr12.544 Acer truncatum HOM05D000068 ORTHO05D003956 3.2e-28 129.0 118 66.1
A03p22160 Brassica napus HOM05D000068 ORTHO05D003956 3.2e-28 129.0 135 60.0
A05p06900 Brassica napus HOM05D000068 ORTHO05D003956 3.2e-28 129.0 134 58.2
BraA05t19655Z Brassica rapa HOM05D000068 ORTHO05D003956 3.2e-28 129.0 134 58.2
FAN06G0375 Fragaria x ananassa HOM05D000068 ORTHO05D003956 3.2e-28 129.0 115 56.5
Medtr1g115430 Medicago truncatula HOM05D000068 ORTHO05D003956 3.2e-28 129.0 127 52.8
Sp5g07160 Schrenkiella parvula HOM05D000068 ORTHO05D003956 3.2e-28 129.0 132 57.6
TPR.G14001 Trifolium pratense HOM05D000068 ORTHO05D003956 3.2e-28 129.0 127 52.0
MSTRG.8234 Avicennia marina HOM05D000068 ORTHO05D003956 4.2e-28 128.6 130 52.3
ECA233G0466 Erigeron canadensis HOM05D000068 ORTHO05D003956 4.2e-28 128.6 129 54.3
Glyma.18G286600 Glycine max HOM05D000068 ORTHO05D003956 4.2e-28 128.6 130 57.7
Potri.008G050400 Populus trichocarpa HOM05D000068 ORTHO05D003956 4.2e-28 128.6 130 63.1
CANSAT56G1302 Cannabis sativa HOM05D000068 ORTHO05D003956 5.4e-28 128.3 132 53.8
Ca_11297_v3 Cicer arietinum L. HOM05D000068 ORTHO05D003956 5.4e-28 128.3 128 53.9
Glyma.02G094800 Glycine max HOM05D000068 ORTHO05D003956 5.4e-28 128.3 130 61.5
Medtr7g023340 Medicago truncatula HOM05D000068 ORTHO05D003956 5.4e-28 128.3 130 55.4
Phvul.007G010600 Phaseolus vulgaris HOM05D000068 ORTHO05D003956 5.4e-28 128.3 127 52.8
AL5G36440 Arabidopsis lyrata HOM05D000068 ORTHO05D003956 7.1e-28 127.9 135 60.7
BcaC02g09744 Brassica carinata HOM05D000068 ORTHO05D003956 7.1e-28 127.9 131 58.8
C04p37140 Brassica napus HOM05D000068 ORTHO05D003956 7.1e-28 127.9 131 58.8
BolC4t25276H Brassica oleracea HOM05D000068 ORTHO05D003956 7.1e-28 127.9 131 58.8
BraA03t11447Z Brassica rapa HOM05D000068 ORTHO05D003956 9.3e-28 127.5 117 65.0
Carub.0005s2196 Capsella rubella HOM05D000068 ORTHO05D003956 9.3e-28 127.5 122 62.3
Glyma.10G290800 Glycine max HOM05D000068 ORTHO05D003956 1.2e-27 127.1 127 52.0
FAN06G2447 Fragaria x ananassa HOM05D000068 ORTHO05D003956 1.6e-27 126.7 115 55.7
Lsat_1_v5_gn_8_16161 Lactuca sativa HOM05D000068 ORTHO05D003956 1.6e-27 126.7 128 54.7
Psat6g236760 Pisum sativum HOM05D000068 ORTHO05D003956 1.6e-27 126.7 128 53.9
PGR142G2178 Punica granatum HOM05D000068 ORTHO05D003956 1.6e-27 126.7 133 65.4
Sed0003459 Sechium edule HOM05D000068 ORTHO05D003956 1.6e-27 126.7 130 53.8
COL.COLO4_14920 Corchorus olitorius HOM05D000068 ORTHO05D003956 2.1e-27 126.3 118 65.3
Eucgr.J00052 Eucalyptus grandis HOM05D000068 ORTHO05D003956 2.1e-27 126.3 114 58.8
Manes.07G111300 Manihot esculenta HOM05D000068 ORTHO05D003956 2.1e-27 126.3 131 61.1
Duzib114G0068 Durio zibethinus HOM05D000068 ORTHO05D003956 2.7e-27 125.9 142 56.3
Prupe.2G229100 Prunus persica HOM05D000068 ORTHO05D003956 2.7e-27 125.9 138 52.2
TPR.G15484 Trifolium pratense HOM05D000068 ORTHO05D003956 2.7e-27 125.9 130 56.2
Thhalv10010064m.g Eutrema salsugineum HOM05D000068 ORTHO05D003956 3.5e-27 125.6 132 54.5
MD01G1121400 Malus domestica HOM05D000068 ORTHO05D003956 3.5e-27 125.6 115 60.0
Manes.10G034900 Manihot esculenta HOM05D000068 ORTHO05D003956 3.5e-27 125.6 133 59.4
Sp4g21780 Schrenkiella parvula HOM05D000068 ORTHO05D003956 3.5e-27 125.6 133 51.9
BcaB02g09115 Brassica carinata HOM05D000068 ORTHO05D003956 4.6e-27 125.2 134 55.2
CARHR134350 Cardamine hirsuta HOM05D000068 ORTHO05D003956 4.6e-27 125.2 129 55.8
Glyma.20G239800 Glycine max HOM05D000068 ORTHO05D003956 4.6e-27 125.2 127 52.8
A04p04620 Brassica napus HOM05D000068 ORTHO05D003956 6.0e-27 124.8 131 58.8
HanXRQChr07g0200971 Helianthus annuus HOM05D000068 ORTHO05D003956 6.0e-27 124.8 128 61.7
BraA04t16172Z Brassica rapa HOM05D000068 ORTHO05D003956 7.9e-27 124.4 131 58.8
ClCG09G020190 Citrullus lanatus HOM05D000068 ORTHO05D003956 1.0e-26 124.0 127 52.8
Eucgr.G02905 Eucalyptus grandis HOM05D000068 ORTHO05D003956 1.0e-26 124.0 132 50.8
Lj1g0011982 Lotus japonicus HOM05D000068 ORTHO05D003956 1.0e-26 124.0 128 57.8
VMungo0720G1917 Vigna mungo HOM05D000068 ORTHO05D003956 1.0e-26 124.0 126 51.6
arahy.Tifrunner.gnm1.ann1.ZP6UQG Arachis hypogaea HOM05D000068 ORTHO05D003956 1.3e-26 123.6 127 58.3
arahy.Tifrunner.gnm1.ann1.JDZ0RF Arachis hypogaea HOM05D000068 ORTHO05D003956 1.8e-26 123.2 127 58.3
CsaV3_5G026260 Cucumis sativus L. HOM05D000068 ORTHO05D003956 1.8e-26 123.2 127 52.0
HanXRQChr08g0220221 Helianthus annuus HOM05D000068 ORTHO05D003956 2.3e-26 122.9 124 50.8
PGR044G0060 Punica granatum HOM05D000068 ORTHO05D003956 2.3e-26 122.9 134 57.5
MELO3C025468.2 Cucumis melo HOM05D000068 ORTHO05D003956 3.9e-26 122.1 127 52.8
BcaB02g08430 Brassica carinata HOM05D000068 ORTHO05D003956 2.5e-25 119.4 132 56.8
Lalb_Chr02g0144021 Lupinus albus HOM05D000068 ORTHO05D003956 7.4e-25 117.9 129 48.8
Lsat_1_v5_gn_2_115960 Lactuca sativa HOM05D000068 ORTHO05D003956 1.1e-23 114.0 102 56.9
Ciclev10030519m.g Citrus clementina HOM05D000068 ORTHO05D003956 6.9e-23 111.3 130 63.8
Lj5g0000141 Lotus japonicus HOM05D000068 ORTHO05D003956 2.0e-22 109.8 127 52.8
AUR62035951 Chenopodium quinoa HOM05D000068 ORTHO05D003956 2.6e-22 109.4 127 48.0
Mapoly0021s0082 Marchantia polymorpha HOM05D000068 ORTHO05D003956 1.1e-20 104.0 110 50.0
Lj2A1052G39 Lonicera japonica HOM05D000068 ORTHO05D003956 1.4e-20 103.6 125 50.4
Os01g0976100 Oryza sativa ssp. japonica HOM05D000068 ORTHO05D003956 3.2e-20 102.4 127 56.7
CSS0038972 Camellia sinensis var. sinensis HOM05D000068 ORTHO05D003956 7.1e-20 101.3 129 49.6
Zm00001eb139690 Zea mays HOM05D000068 ORTHO05D003956 9.3e-20 100.9 130 55.4
Zm00001eb012760 Zea mays HOM05D000068 ORTHO05D003956 1.2e-19 100.5 134 50.0
SMO367G0631 Selaginella moellendorffii HOM05D000068 ORTHO05D003956 2.7e-19 99.4 126 39.7
Os03g0280000 Oryza sativa ssp. japonica HOM05D000068 ORTHO05D003956 7.9e-19 97.8 134 39.6
ECA236G2683 Erigeron canadensis HOM05D000068 ORTHO05D003956 8.7e-18 94.4 142 45.8
Dinv34339 Davidia involucrata HOM05D000068 ORTHO05D003956 1.9e-17 93.2 115 53.0
HanXRQChr05g0134041 Helianthus annuus HOM05D000068 ORTHO05D003956 4.3e-17 92.0 120 41.7
Lsat_1_v5_gn_8_78681 Lactuca sativa HOM05D000068 ORTHO05D003956 4.3e-17 92.0 121 52.1
HanXRQChr06g0175981 Helianthus annuus HOM05D000068 ORTHO05D003956 2.8e-16 89.4 120 41.7
Pp3c9_13390 Physcomitrium patens HOM05D000068 ORTHO05D003956 8.2e-16 87.8 114 47.4
Pp3c2_13930 Physcomitrium patens HOM05D000068 ORTHO05D003956 4.0e-15 85.5 110 47.3
Dinv26274 Davidia involucrata HOM05D000068 ORTHO05D003956 3.4e-14 82.4 124 48.4
vmacro07101 Vaccinium macrocarpon HOM05D000068 ORTHO05D016561 3.4e-14 82.4 69 58.0
DCAR_006006 Daucus carota HOM05D000068 ORTHO05D003956 8.4e-13 77.8 126 54.0
arahy.Tifrunner.gnm1.ann1.E1W7E8 Arachis hypogaea HOM05D000068 ORTHO05D016561 1.2e-11 73.9 94 44.7
Rhsim11G0085400 Rhododendron simsii HOM05D000068 ORTHO05D016561 1.6e-11 73.6 53 62.3
Solyc04g010300.4 Solanum lycopersicum HOM05D000068 ORTHO05D016561 6.9e-07 58.2 84 40.5
Hma1.2p1_2582F.1_g324800 Hydrangea macrophylla HOM05D000068 ORTHO05D016561 2.6e-06 56.2 51 58.8
Rhsim07G0129600 Rhododendron simsii HOM05D000068 ORTHO05D000084 3.4e-06 55.8 49 51.0
arahy.Tifrunner.gnm1.ann1.PAG1M8 Arachis hypogaea HOM05D000068 ORTHO05D016561 5.9e-06 55.1 75 46.7


User provided reference genes

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