Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02663 Aquilegia oxysepala HOM05D000377 ORTHO05D000892 6.6e-44 180.6 114 100.0
Aqoxy7G04189 Aquilegia oxysepala HOM05D000377 ORTHO05D000892 2.3e-41 172.2 114 92.1
Aqoxy7G01352 Aquilegia oxysepala HOM05D000377 ORTHO05D000892 2.4e-38 162.2 113 89.4
Aqoxy7G02868 Aquilegia oxysepala HOM05D000377 ORTHO05D000892 7.8e-37 157.1 113 82.3
Aqoxy7G02606 Aquilegia oxysepala HOM05D000377 ORTHO05D000892 4.0e-25 118.2 91 94.5
TAR383G0958 Trochodendron aralioides HOM05D000377 ORTHO05D000892 1.6e-21 106.3 112 50.0
CiPaw.03G220700 Carya illinoinensis HOM05D000377 ORTHO05D000892 3.1e-17 92.0 116 46.6
MBI04_g35673_MAGBIO Magnolia biondii HOM05D000377 ORTHO05D000892 6.9e-17 90.9 115 45.2
Dinv42278 Davidia involucrata HOM05D000377 ORTHO05D000892 2.0e-16 89.4 113 44.2
Nn8g38990 Nelumbo nucifera HOM05D000377 ORTHO05D000892 3.4e-16 88.6 111 43.2
Psat1g049520 Pisum sativum HOM05D000377 ORTHO05D000892 5.8e-16 87.8 113 44.2
TAR636G3124 Trochodendron aralioides HOM05D000377 ORTHO05D000892 9.9e-16 87.0 112 45.5
Dinv36723 Davidia involucrata HOM05D000377 ORTHO05D000892 1.3e-15 86.7 115 42.6
MD15G1201300 Malus domestica HOM05D000377 ORTHO05D000892 1.7e-15 86.3 113 46.0
TAR624G0702 Trochodendron aralioides HOM05D000377 ORTHO05D000892 1.7e-15 86.3 114 57.0
Haze_25857 Corylus avellana HOM05D000377 ORTHO05D000892 2.2e-15 85.9 114 44.7
Cfa003146 Carpinus fangiana HOM05D000377 ORTHO05D000892 3.8e-15 85.1 116 44.0
Lj2g0011464 Lotus japonicus HOM05D000377 ORTHO05D000892 4.9e-15 84.7 112 42.9
TWI32G0438 Tripterygium wilfordii HOM05D000377 ORTHO05D000892 4.9e-15 84.7 113 46.0
VMungo0464G0314 Vigna mungo HOM05D000377 ORTHO05D000892 4.9e-15 84.7 111 41.4
Ca_25600_v3 Cicer arietinum L. HOM05D000377 ORTHO05D000892 8.4e-15 84.0 105 44.8
MD02G1069500 Malus domestica HOM05D000377 ORTHO05D000892 8.4e-15 84.0 113 44.2
Prupe.7G216200 Prunus persica HOM05D000377 ORTHO05D000892 8.4e-15 84.0 113 44.2
QL02p040229 Quercus lobata HOM05D000377 ORTHO05D000892 1.9e-14 82.8 111 41.4
Phvul.004G173600 Phaseolus vulgaris HOM05D000377 ORTHO05D000892 2.4e-14 82.4 111 40.5
arahy.Tifrunner.gnm1.ann1.GS16M6 Arachis hypogaea HOM05D000377 ORTHO05D000892 3.2e-14 82.0 113 42.5
MBI01_g35894_MAGBIO Magnolia biondii HOM05D000377 ORTHO05D000892 4.2e-14 81.6 112 41.1
CANSAT56G3538 Cannabis sativa HOM05D000377 ORTHO05D000892 7.1e-14 80.9 116 42.2
GSVIVG01015265001 Vitis vinifera HOM05D000377 ORTHO05D000892 1.2e-13 80.1 113 43.4
Glyma.07G126800 Glycine max HOM05D000377 ORTHO05D000892 1.6e-13 79.7 111 40.5
Glyma.01G005000 Glycine max HOM05D000377 ORTHO05D000892 2.7e-13 79.0 111 38.7
RcHm_v2.0_Chr2g0092381 Rosa chinensis HOM05D000377 ORTHO05D000892 2.7e-13 79.0 116 40.5
CiPaw.04G154000 Carya illinoinensis HOM05D000377 ORTHO05D000892 3.5e-13 78.6 116 40.5
Lalb_Chr14g0375261 Lupinus albus HOM05D000377 ORTHO05D000892 7.9e-13 77.4 113 41.6
Lalb_Chr22g0349861 Lupinus albus HOM05D000377 ORTHO05D000892 7.9e-13 77.4 114 40.4
CSS0016402 Camellia sinensis var. sinensis HOM05D000377 ORTHO05D000892 1.8e-12 76.3 112 40.2
Hma1.2p1_0049F.1_g028160 Hydrangea macrophylla HOM05D000377 ORTHO05D000892 2.3e-12 75.9 112 38.4
TWI34G0664 Tripterygium wilfordii HOM05D000377 ORTHO05D000892 2.3e-12 75.9 114 40.4
Manes.16G105900 Manihot esculenta HOM05D000377 ORTHO05D000892 3.0e-12 75.5 113 38.9
CsaV3_2G001650 Cucumis sativus L. HOM05D000377 ORTHO05D000892 2.5e-11 72.4 115 41.7
FAN23G3034 Fragaria x ananassa HOM05D000377 ORTHO05D000892 2.5e-11 72.4 115 40.0
Thecc.09G095900 Theobroma cacao HOM05D000377 ORTHO05D000892 4.3e-11 71.6 113 38.1
ClCG11G001920 Citrullus lanatus HOM05D000377 ORTHO05D000892 5.6e-11 71.2 114 38.6
Manes.03G029600 Manihot esculenta HOM05D000377 ORTHO05D000892 5.6e-11 71.2 113 38.9
TWI34G1610 Tripterygium wilfordii HOM05D000377 ORTHO05D000892 5.6e-11 71.2 114 43.0
COL.COLO4_18264 Corchorus olitorius HOM05D000377 ORTHO05D000892 7.4e-11 70.9 113 38.1
ClCG03G015890 Citrullus lanatus HOM05D000377 ORTHO05D000892 9.6e-11 70.5 111 36.0
Gohir.A07G009400 Gossypium hirsutum HOM05D000377 ORTHO05D000892 1.6e-10 69.7 113 36.3
Gohir.D07G009700 Gossypium hirsutum HOM05D000377 ORTHO05D000892 1.6e-10 69.7 113 36.3
Gorai.001G009900 Gossypium raimondii HOM05D000377 ORTHO05D000892 1.6e-10 69.7 113 36.3
TAR626G1096 Trochodendron aralioides HOM05D001428 ORTHO05D000892 2.1e-10 69.3 112 38.4
Dinv27951 Davidia involucrata HOM05D000377 ORTHO05D000892 2.8e-10 68.9 112 38.4
MELO3C004610.2 Cucumis melo HOM05D000377 ORTHO05D000892 3.6e-10 68.6 115 40.9
FAN28G1276 Fragaria x ananassa HOM05D000377 ORTHO05D000892 4.8e-10 68.2 115 36.5
FvH4_1g06640 Fragaria vesca HOM05D000377 ORTHO05D000892 6.2e-10 67.8 117 38.5
Duzib187G0242 Durio zibethinus HOM05D000377 ORTHO05D000892 8.1e-10 67.4 114 35.1
MBI04_g06983_MAGBIO Magnolia biondii HOM05D000377 ORTHO05D000892 8.1e-10 67.4 49 67.3
FAN19G0950 Fragaria x ananassa HOM05D000377 ORTHO05D000892 1.1e-09 67.0 116 38.8
FAN26G0794 Fragaria x ananassa HOM05D000377 ORTHO05D000892 1.1e-09 67.0 116 35.3
Sed0001184 Sechium edule HOM05D000377 ORTHO05D000892 1.1e-09 67.0 114 31.6
Duzib168G2195 Durio zibethinus HOM05D000377 ORTHO05D000892 1.4e-09 66.6 113 35.4
TWI63G1626 Tripterygium wilfordii HOM05D000377 ORTHO05D000892 1.4e-09 66.6 114 41.2
Dinv23411 Davidia involucrata HOM05D000377 ORTHO05D000892 1.8e-09 66.2 114 39.5
Duzib150G1481 Durio zibethinus HOM05D000377 ORTHO05D000892 1.8e-09 66.2 114 36.0
Sp7g27110 Schrenkiella parvula HOM05D000377 ORTHO05D000892 2.4e-09 65.9 114 40.4
MELO3C015436.2 Cucumis melo HOM05D000377 ORTHO05D000892 4.0e-09 65.1 111 32.4
CsaV3_1G040060 Cucumis sativus L. HOM05D000377 ORTHO05D000892 4.0e-09 65.1 111 32.4
FAN26G2766 Fragaria x ananassa HOM05D000377 ORTHO05D000892 4.0e-09 65.1 116 34.5
Atru.chr7.1512 Acer truncatum HOM05D000377 ORTHO05D000892 6.9e-09 64.3 114 34.2
Gohir.D08G265100 Gossypium hirsutum HOM05D000377 ORTHO05D000892 1.2e-08 63.5 114 38.6
Manes.03G057100 Manihot esculenta HOM05D000377 ORTHO05D000892 1.2e-08 63.5 111 39.6
Aa31LG2G21250 Aethionema arabicum HOM05D000377 ORTHO05D000892 1.5e-08 63.2 113 38.1
Aa31LG8G16790 Aethionema arabicum HOM05D000377 ORTHO05D000892 1.5e-08 63.2 114 40.4
Gorai.004G283000 Gossypium raimondii HOM05D000377 ORTHO05D000892 1.5e-08 63.2 114 37.7
VMungo0251G3567 Vigna mungo HOM05D000377 ORTHO05D000892 1.5e-08 63.2 111 34.2
Nitab4.5_0007387g0010 Nicotiana tabacum HOM05D000377 ORTHO05D000892 2.0e-08 62.8 112 37.5
Gohir.A08G244200 Gossypium hirsutum HOM05D000377 ORTHO05D000892 2.6e-08 62.4 114 36.8
Actinidia25286 Actinidia chinensis HOM05D000377 ORTHO05D000892 3.4e-08 62.0 112 38.4
BraA03t14941Z Brassica rapa HOM05D000377 ORTHO05D000892 3.4e-08 62.0 113 39.8
Sopen08g019620 Solanum pennellii HOM05D000377 ORTHO05D000892 4.5e-08 61.6 112 40.2
Nitab4.5_0009098g0010 Nicotiana tabacum HOM05D000377 ORTHO05D000892 7.6e-08 60.8 117 39.3
PSO210G0647 Papaver somniferum HOM05D000377 ORTHO05D000892 7.6e-08 60.8 103 37.9
Phvul.002G306100 Phaseolus vulgaris HOM05D000377 ORTHO05D000892 7.6e-08 60.8 111 33.3
Sed0009337 Sechium edule HOM05D000377 ORTHO05D000892 7.6e-08 60.8 114 34.2
BcaNung01327 Brassica carinata HOM05D000377 ORTHO05D000892 9.9e-08 60.5 113 38.1
Glyma.08G031400 Glycine max HOM05D000377 ORTHO05D000892 9.9e-08 60.5 111 35.1
Nitab4.5_0004011g0020 Nicotiana tabacum HOM05D000377 ORTHO05D000892 9.9e-08 60.5 117 39.3
Thhalv10025226m.g Eutrema salsugineum HOM05D000377 ORTHO05D000892 1.3e-07 60.1 114 38.6
Nitab4.5_0000318g0020 Nicotiana tabacum HOM05D000377 ORTHO05D000892 1.3e-07 60.1 112 36.6
GSVIVG01035331001 Vitis vinifera HOM05D000377 ORTHO05D000892 1.3e-07 60.1 112 34.8
BcaC09g51707 Brassica carinata HOM05D000377 ORTHO05D000892 1.7e-07 59.7 113 37.2
Eucgr.C03701 Eucalyptus grandis HOM05D000377 ORTHO05D000892 1.7e-07 59.7 119 31.9
PGSC0003DMG400025459 Solanum tuberosum HOM05D000377 ORTHO05D000892 1.7e-07 59.7 112 39.3
AL7G23260 Arabidopsis lyrata HOM05D000377 ORTHO05D000892 2.2e-07 59.3 113 38.9
CDE02G4302 Ceratophyllum demersum HOM05D000377 ORTHO05D000892 2.2e-07 59.3 117 33.3
COL.COLO4_21014 Corchorus olitorius HOM05D000377 ORTHO05D000892 2.2e-07 59.3 111 33.3
PSO210G0984 Papaver somniferum HOM05D000377 ORTHO05D000892 2.2e-07 59.3 103 36.9
Gohir.D05G029200 Gossypium hirsutum HOM05D000377 ORTHO05D000892 2.9e-07 58.9 111 34.2
Gohir.D13G200200 Gossypium hirsutum HOM05D000377 ORTHO05D000892 2.9e-07 58.9 112 33.9
Gorai.009G029300 Gossypium raimondii HOM05D000377 ORTHO05D000892 2.9e-07 58.9 111 34.2
CAN.G9.12 Capsicum annuum HOM05D000377 ORTHO05D000892 3.8e-07 58.5 112 36.6
Ca_17382_v3 Cicer arietinum L. HOM05D000377 ORTHO05D000892 3.8e-07 58.5 114 35.1
Medtr6g090380 Medicago truncatula HOM05D000377 ORTHO05D000892 3.8e-07 58.5 105 42.9
Rhsim03G0235400 Rhododendron simsii HOM05D000377 ORTHO05D000892 3.8e-07 58.5 113 35.4
Sabra06G0182700 Salix brachista HOM05D000377 ORTHO05D000892 3.8e-07 58.5 113 34.5
Ciclev10008633m.g Citrus clementina HOM05D000377 ORTHO05D000892 4.9e-07 58.2 116 35.3
CARHR236920 Cardamine hirsuta HOM05D000377 ORTHO05D000892 6.4e-07 57.8 113 38.1
Gorai.013G229000 Gossypium raimondii HOM05D000377 ORTHO05D000892 6.4e-07 57.8 112 33.9
AL3G48380 Arabidopsis lyrata HOM05D000377 ORTHO05D000892 8.4e-07 57.4 114 39.5
BcaNung00454 Brassica carinata HOM05D000377 ORTHO05D000892 8.4e-07 57.4 111 36.0
CSS0012824 Camellia sinensis var. sinensis HOM05D000377 ORTHO05D000892 8.4e-07 57.4 114 32.5
Carub.0007s1140 Capsella rubella HOM05D000377 ORTHO05D000892 8.4e-07 57.4 113 38.1
Cc06_g10850 Coffea canephora HOM05D000377 ORTHO05D000892 1.1e-06 57.0 126 34.9
Thhalv10002026m.g Eutrema salsugineum HOM05D000377 ORTHO05D000892 1.1e-06 57.0 113 38.1
Potri.018G058600 Populus trichocarpa HOM05D000377 ORTHO05D000892 1.4e-06 56.6 113 34.5
Prupe.1G416500 Prunus persica HOM05D000377 ORTHO05D000892 1.4e-06 56.6 114 33.3
THA.LOC104814579 Tarenaya hassleriana HOM05D000377 ORTHO05D000892 1.4e-06 56.6 111 33.3
CARHR110270 Cardamine hirsuta HOM05D000377 ORTHO05D000892 1.9e-06 56.2 114 40.4
AT4G29190 Arabidopsis thaliana HOM05D000377 ORTHO05D000892 2.4e-06 55.8 113 36.3
MD08G1075000 Malus domestica HOM05D000377 ORTHO05D000892 2.4e-06 55.8 114 31.6
Cc08_g10070 Coffea canephora HOM05D000377 ORTHO05D000892 3.2e-06 55.5 117 35.9
Potri.006G234300 Populus trichocarpa HOM05D000377 ORTHO05D000892 3.2e-06 55.5 113 32.7
Sp3g33170 Schrenkiella parvula HOM05D000377 ORTHO05D000892 3.2e-06 55.5 113 38.1
Atru.chr7.2039 Acer truncatum HOM05D000377 ORTHO05D000892 4.2e-06 55.1 117 31.6
Glyma.05G224400 Glycine max HOM05D000377 ORTHO05D000892 4.2e-06 55.1 111 31.5
Thecc.09G049700 Theobroma cacao HOM05D000377 ORTHO05D000892 4.2e-06 55.1 111 30.6
CANSAT25G2273 Cannabis sativa HOM05D000377 ORTHO05D000892 5.5e-06 54.7 112 34.8
Duzib168G0332 Durio zibethinus HOM05D000377 ORTHO05D000892 7.1e-06 54.3 111 30.6
MD15G1062500 Malus domestica HOM05D000377 ORTHO05D000892 7.1e-06 54.3 114 31.6
AT2G19810 Arabidopsis thaliana HOM05D000377 ORTHO05D000892 9.3e-06 53.9 114 37.7


User provided reference genes

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