Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 3.7e-134 481.5 234 100.0
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 2.3e-75 286.2 234 64.1
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 3.1e-72 275.8 158 79.1
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 3.1e-72 275.8 219 61.2
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 1.3e-70 270.4 220 60.5
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 2.9e-70 269.2 234 59.0
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 3.8e-70 268.9 221 60.6
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 5.5e-69 265.0 198 65.2
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 7.1e-69 264.6 218 62.8
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 7.1e-69 264.6 158 74.7
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 1.6e-68 263.5 158 74.1
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 2.7e-68 262.7 198 63.6
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 4.6e-68 261.9 202 64.9
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 6.0e-68 261.5 216 62.5
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 1.3e-67 260.4 159 74.8
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 1.8e-67 260.0 221 57.9
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 1.8e-67 260.0 221 57.9
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 5.1e-67 258.5 188 65.4
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 5.1e-67 258.5 221 56.6
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 1.5e-66 256.9 158 70.3
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 1.9e-66 256.5 158 75.9
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 1.9e-66 256.5 158 72.2
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 2.5e-66 256.1 219 58.9
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 7.4e-66 254.6 171 67.8
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 7.4e-66 254.6 158 69.6
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 9.6e-66 254.2 158 69.6
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 1.3e-65 253.8 158 69.6
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 3.7e-65 252.3 158 73.4
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 3.7e-65 252.3 158 73.4
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 4.8e-65 251.9 166 71.1
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 4.8e-65 251.9 158 74.1
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 4.8e-65 251.9 158 71.5
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 4.8e-65 251.9 158 73.4
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 6.2e-65 251.5 168 68.5
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 1.1e-64 250.8 222 57.2
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.1e-64 250.8 242 56.6
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 1.4e-64 250.4 164 67.1
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 2.4e-64 249.6 158 72.2
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 6.9e-64 248.1 162 70.4
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 9.0e-64 247.7 222 55.4
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.2e-63 247.3 162 69.8
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 1.2e-63 247.3 166 69.3
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 1.2e-63 247.3 166 69.3
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 1.2e-63 247.3 217 57.1
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 1.5e-63 246.9 222 55.4
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 2.0e-63 246.5 158 70.9
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 2.6e-63 246.1 224 57.1
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 4.5e-63 245.4 221 57.5
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 5.8e-63 245.0 160 69.4
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 5.8e-63 245.0 161 67.1
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 7.6e-63 244.6 158 69.6
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 1.0e-62 244.2 158 70.9
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 1.0e-62 244.2 158 71.5
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 1.7e-62 243.4 234 56.8
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 1.7e-62 243.4 225 56.9
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 2.2e-62 243.0 161 69.6
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 2.2e-62 243.0 156 70.5
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 2.2e-62 243.0 158 70.3
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 2.9e-62 242.7 209 60.8
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 8.4e-62 241.1 218 57.3
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 3.2e-61 239.2 156 68.6
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 3.2e-61 239.2 159 68.6
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 4.2e-61 238.8 222 54.1
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 5.5e-61 238.4 158 66.5
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 5.5e-61 238.4 156 67.9
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 7.1e-61 238.0 152 72.4
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 9.3e-61 237.7 158 67.1
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 1.2e-60 237.3 163 66.3
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 1.6e-60 236.9 222 55.0
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.6e-60 236.9 158 65.2
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 2.7e-60 236.1 148 71.6
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 3.5e-60 235.7 148 68.2
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 3.5e-60 235.7 148 71.6
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 3.5e-60 235.7 148 71.6
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 3.5e-60 235.7 148 71.6
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 3.5e-60 235.7 148 68.2
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 3.5e-60 235.7 139 77.0
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 4.6e-60 235.3 148 68.9
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 4.6e-60 235.3 161 66.5
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 7.9e-60 234.6 148 70.9
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 1.0e-59 234.2 148 68.9
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 1.9e-58 229.9 199 54.3
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 4.3e-58 228.8 161 64.6
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 2.8e-57 226.1 183 60.7
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 1.1e-56 224.2 157 64.3
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 5.3e-56 221.9 226 54.4
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 6.5e-54 214.9 170 57.1
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 3.6e-52 209.1 163 55.2
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 3.0e-51 206.1 141 66.7
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 5.7e-50 201.8 180 56.7
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 5.7e-50 201.8 159 59.7
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 3.8e-46 189.1 160 53.1
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 2.0e-42 176.8 160 50.6
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 3.3e-42 176.0 134 55.2
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 3.1e-40 169.5 140 51.4
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 6.9e-40 168.3 115 67.8
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 1.0e-38 164.5 163 47.9
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 1.2e-36 157.5 152 46.7
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 4.1e-32 142.5 139 46.8
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 7.2e-29 131.7 82 72.0
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 3.3e-26 122.9 152 48.0
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 5.7e-26 122.1 145 40.7
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 2.8e-25 119.8 142 45.1
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 4.7e-20 102.4 156 37.2
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 1.0e-19 101.3 52 80.8
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.8e-17 93.2 54 81.5
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 1.4e-11 74.3 44 75.0
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 2.9e-06 56.6 77 37.7


User provided reference genes

Program Settings