Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02505 Aquilegia oxysepala HOM05D003597 ORTHO05D004420 5.9e-88 327.4 155 100.0
Aqoxy5G02474 Aquilegia oxysepala HOM05D003597 ORTHO05D004420 5.6e-70 267.7 149 85.2
Dinv27385 Davidia involucrata HOM05D003597 ORTHO05D004420 4.0e-44 181.8 149 58.4
Nn5g27956 Nelumbo nucifera HOM05D003597 ORTHO05D004420 5.3e-44 181.4 148 58.8
TAR197G0005 Trochodendron aralioides HOM05D003597 ORTHO05D004420 9.0e-44 180.6 149 60.4
Cfa015958 Carpinus fangiana HOM05D003597 ORTHO05D004420 1.2e-43 180.3 148 56.8
Haze_00524 Corylus avellana HOM05D003597 ORTHO05D004420 1.2e-43 180.3 148 56.8
Dinv26719 Davidia involucrata HOM05D003597 ORTHO05D004420 2.0e-43 179.5 147 57.8
vmacro12529 Vaccinium macrocarpon HOM05D003597 ORTHO05D004420 2.6e-43 179.1 148 55.4
Ciclev10000027m.g Citrus clementina HOM05D003597 ORTHO05D004420 3.4e-43 178.7 148 57.4
GSVIVG01008944001 Vitis vinifera HOM05D003597 ORTHO05D004420 3.4e-43 178.7 148 56.8
CSS0024515 Camellia sinensis var. sinensis HOM05D003597 ORTHO05D004420 5.8e-43 177.9 149 57.0
MBI06_g01044_MAGBIO Magnolia biondii HOM05D003597 ORTHO05D004420 7.6e-43 177.6 149 59.1
Manes.18G072800 Manihot esculenta HOM05D003597 ORTHO05D004420 9.9e-43 177.2 148 56.8
Cpa.g.c31003 Carica papaya HOM05D003597 ORTHO05D004420 2.9e-42 175.6 148 55.4
Cc00_g02330 Coffea canephora HOM05D003597 ORTHO05D004420 3.8e-42 175.3 149 57.0
Medtr3g073320 Medicago truncatula HOM05D003597 ORTHO05D004420 3.8e-42 175.3 152 57.9
Actinidia23041 Actinidia chinensis HOM05D003597 ORTHO05D004420 1.4e-41 173.3 149 54.4
Lj4C579G4 Lonicera japonica HOM05D003597 ORTHO05D004420 1.4e-41 173.3 150 56.7
TWI12G1217 Tripterygium wilfordii HOM05D003597 ORTHO05D004420 1.9e-41 172.9 148 55.4
Oeu030027.4 Olea europaea HOM05D003597 ORTHO05D004420 3.2e-41 172.2 149 55.0
Duzib041G0227 Durio zibethinus HOM05D003597 ORTHO05D004420 5.4e-41 171.4 144 56.2
PSO017G6492 Papaver somniferum HOM05D003597 ORTHO05D004420 5.4e-41 171.4 149 55.0
PSO170G0537 Papaver somniferum HOM05D003597 ORTHO05D004420 5.4e-41 171.4 149 55.0
CANSAT25G1161 Cannabis sativa HOM05D003597 ORTHO05D004420 2.7e-40 169.1 148 54.1
Ca_25762_v3 Cicer arietinum L. HOM05D003597 ORTHO05D004420 2.7e-40 169.1 152 56.6
Thecc.08G116700 Theobroma cacao HOM05D003597 ORTHO05D004420 3.5e-40 168.7 144 55.6
COL.COLO4_03393 Corchorus olitorius HOM05D003597 ORTHO05D004420 4.6e-40 168.3 144 55.6
DCAR_031233 Daucus carota HOM05D003597 ORTHO05D004420 4.6e-40 168.3 147 54.4
Prupe.1G506100 Prunus persica HOM05D003597 ORTHO05D004420 4.6e-40 168.3 149 52.3
TPR.G32944 Trifolium pratense HOM05D003597 ORTHO05D004420 6.0e-40 167.9 150 56.7
TWI36G0588 Tripterygium wilfordii HOM05D003597 ORTHO05D004420 6.0e-40 167.9 148 54.1
CiPaw.05G229100 Carya illinoinensis HOM05D003597 ORTHO05D004420 7.8e-40 167.5 147 55.1
CiPaw.06G024800 Carya illinoinensis HOM05D003597 ORTHO05D004420 1.0e-39 167.2 148 55.4
MD15G1358500 Malus domestica HOM05D003597 ORTHO05D004420 1.3e-39 166.8 149 52.3
TWI56G1037 Tripterygium wilfordii HOM05D003597 ORTHO05D004420 1.3e-39 166.8 148 52.7
Oeu043794.4 Olea europaea HOM05D003597 ORTHO05D004420 1.7e-39 166.4 149 53.0
Phvul.009G025800 Phaseolus vulgaris HOM05D003597 ORTHO05D004420 1.7e-39 166.4 152 53.3
VMungo1309G0254 Vigna mungo HOM05D003597 ORTHO05D004420 1.7e-39 166.4 148 54.7
arahy.Tifrunner.gnm1.ann1.Y09WXD Arachis hypogaea HOM05D003597 ORTHO05D004420 3.9e-39 165.2 148 54.1
arahy.Tifrunner.gnm1.ann1.WJPD8A Arachis hypogaea HOM05D003597 ORTHO05D004420 5.1e-39 164.9 148 54.1
Rhsim06G0109200 Rhododendron simsii HOM05D003597 ORTHO05D004420 5.1e-39 164.9 136 56.6
Lalb_Chr11g0065691 Lupinus albus HOM05D003597 ORTHO05D004420 6.6e-39 164.5 148 53.4
MBI03_g11136_MAGBIO Magnolia biondii HOM05D003597 ORTHO05D004420 1.1e-38 163.7 144 57.6
Sabra02G0070400 Salix brachista HOM05D003597 ORTHO05D004420 1.9e-38 162.9 148 54.1
Lalb_Chr08g0241721 Lupinus albus HOM05D003597 ORTHO05D004420 2.5e-38 162.5 152 53.9
THA.LOC104800176 Tarenaya hassleriana HOM05D003597 ORTHO05D004420 2.5e-38 162.5 148 55.4
QL12p035319 Quercus lobata HOM05D003597 ORTHO05D004420 3.3e-38 162.2 148 54.1
MSTRG.25418 Avicennia marina HOM05D003597 ORTHO05D004420 4.3e-38 161.8 149 51.0
Duzib093G1782 Durio zibethinus HOM05D003597 ORTHO05D004420 4.3e-38 161.8 143 54.5
Gohir.A01G187600 Gossypium hirsutum HOM05D003597 ORTHO05D004420 4.3e-38 161.8 143 54.5
Atru.chr13.1317 Acer truncatum HOM05D003597 ORTHO05D004420 5.6e-38 161.4 148 54.1
Atru.chr13.1361 Acer truncatum HOM05D003597 ORTHO05D004420 5.6e-38 161.4 148 54.1
Glyma.04G253800 Glycine max HOM05D003597 ORTHO05D004420 5.6e-38 161.4 152 53.9
Gohir.D01G182100 Gossypium hirsutum HOM05D003597 ORTHO05D004420 1.6e-37 159.8 143 53.8
Gorai.002G220300 Gossypium raimondii HOM05D003597 ORTHO05D004420 1.6e-37 159.8 143 53.8
Glyma.06G108500 Glycine max HOM05D003597 ORTHO05D004420 2.1e-37 159.5 152 54.6
Psat5g134160 Pisum sativum HOM05D003597 ORTHO05D004420 2.1e-37 159.5 149 55.0
Lj1g0013609 Lotus japonicus HOM05D003597 ORTHO05D004420 2.8e-37 159.1 152 53.3
Gohir.A06G040800 Gossypium hirsutum HOM05D003597 ORTHO05D004420 3.6e-37 158.7 134 56.0
RcHm_v2.0_Chr7g0240911 Rosa chinensis HOM05D003597 ORTHO05D004420 3.6e-37 158.7 149 51.0
Sabra05G0129300 Salix brachista HOM05D003597 ORTHO05D004420 4.8e-37 158.3 148 54.1
SalBow7G0935 Salvia bowleyana HOM05D003597 ORTHO05D004420 4.8e-37 158.3 150 50.7
SalBow7G4807 Salvia bowleyana HOM05D003597 ORTHO05D004420 4.8e-37 158.3 150 50.7
Potri.002G089400 Populus trichocarpa HOM05D003597 ORTHO05D004420 6.2e-37 157.9 148 52.7
MD08G1173200 Malus domestica HOM05D003597 ORTHO05D004420 1.1e-36 157.1 149 49.0
CAN.G255.18 Capsicum annuum HOM05D003597 ORTHO05D004420 4.0e-36 155.2 149 51.7
Sopen11g008560 Solanum pennellii HOM05D003597 ORTHO05D004420 5.3e-36 154.8 150 52.7
Gohir.D06G041800 Gossypium hirsutum HOM05D003597 ORTHO05D004420 1.5e-35 153.3 134 54.5
Gorai.010G047000 Gossypium raimondii HOM05D003597 ORTHO05D004420 1.5e-35 153.3 134 54.5
Nitab4.5_0002496g0040 Nicotiana tabacum HOM05D003597 ORTHO05D004420 1.5e-35 153.3 150 50.7
Solyc11g013530.3 Solanum lycopersicum HOM05D003597 ORTHO05D004420 1.5e-35 153.3 150 52.0
MSTRG.1487 Avicennia marina HOM05D003597 ORTHO05D004420 7.6e-35 151.0 147 50.3
Sp5g32980 Schrenkiella parvula HOM05D003597 ORTHO05D004420 7.6e-35 151.0 148 54.1
Sed0005676 Sechium edule HOM05D003597 ORTHO05D004420 7.6e-35 151.0 146 47.9
ClCG03G009090 Citrullus lanatus HOM05D003597 ORTHO05D004420 9.9e-35 150.6 146 47.9
MELO3C022786.2 Cucumis melo HOM05D003597 ORTHO05D004420 2.2e-34 149.4 146 47.9
ECA246G2386 Erigeron canadensis HOM05D003597 ORTHO05D004420 2.9e-34 149.1 152 49.3
CARHR071300 Cardamine hirsuta HOM05D003597 ORTHO05D004420 4.9e-34 148.3 147 51.0
CsaV3_5G023530 Cucumis sativus L. HOM05D003597 ORTHO05D004420 6.4e-34 147.9 146 47.3
Potri.005G171800 Populus trichocarpa HOM05D003597 ORTHO05D004420 6.4e-34 147.9 148 51.4
FAN08G0909 Fragaria x ananassa HOM05D003597 ORTHO05D004420 8.4e-34 147.5 149 47.0
Lalb_Chr17g0344031 Lupinus albus HOM05D003597 ORTHO05D004420 1.1e-33 147.1 149 51.7
FvH4_5g38940 Fragaria vesca HOM05D003597 ORTHO05D004420 1.9e-33 146.4 149 47.0
A07p43090 Brassica napus HOM05D003597 ORTHO05D004420 2.4e-33 146.0 146 50.7
BraA07t31831Z Brassica rapa HOM05D003597 ORTHO05D004420 2.4e-33 146.0 146 50.7
HanXRQChr05g0150511 Helianthus annuus HOM05D003597 ORTHO05D004420 2.4e-33 146.0 151 49.0
AT1G77800 Arabidopsis thaliana HOM05D003597 ORTHO05D004420 3.2e-33 145.6 147 51.7
SGA_v2.0_scaffold118G32437 Striga asiatica HOM05D003597 ORTHO05D004420 4.2e-33 145.2 148 50.0
THA.LOC104813639 Tarenaya hassleriana HOM05D003597 ORTHO05D004420 4.2e-33 145.2 147 50.3
BcaB03g15920 Brassica carinata HOM05D003597 ORTHO05D004420 5.4e-33 144.8 148 49.3
Migut.C01191 Erythranthe guttata HOM05D003597 ORTHO05D004420 5.4e-33 144.8 145 46.9
FAN18G1206 Fragaria x ananassa HOM05D003597 ORTHO05D004420 5.4e-33 144.8 149 46.3
FAN04G0001 Fragaria x ananassa HOM05D003597 ORTHO05D004420 7.1e-33 144.4 149 46.3
C02p35180 Brassica napus HOM05D003597 ORTHO05D004420 9.3e-33 144.1 148 50.0
PGR042G3777 Punica granatum HOM05D003597 ORTHO05D004420 9.3e-33 144.1 143 47.6
BcaB05g25080 Brassica carinata HOM05D003597 ORTHO05D004420 1.2e-32 143.7 148 49.3
A02p21890 Brassica napus HOM05D003597 ORTHO05D004420 1.2e-32 143.7 148 50.0
BraA02t07190Z Brassica rapa HOM05D003597 ORTHO05D004420 1.2e-32 143.7 148 50.0
AL2G38040 Arabidopsis lyrata HOM05D003597 ORTHO05D004420 1.6e-32 143.3 147 51.0
BcaC03g15776 Brassica carinata HOM05D003597 ORTHO05D004420 1.6e-32 143.3 148 50.0
BcaC08g47623 Brassica carinata HOM05D003597 ORTHO05D004420 1.6e-32 143.3 146 50.7
C06p51740 Brassica napus HOM05D003597 ORTHO05D004420 1.6e-32 143.3 146 50.7
BolC2t09533H Brassica oleracea HOM05D003597 ORTHO05D004420 1.6e-32 143.3 148 50.0
BolC6t40196H Brassica oleracea HOM05D003597 ORTHO05D004420 1.6e-32 143.3 146 50.7
Eucgr.F03741 Eucalyptus grandis HOM05D003597 ORTHO05D004420 1.6e-32 143.3 146 46.6
Ah.05g172620 Amaranthus hybridus HOM05D003597 ORTHO05D004420 2.7e-32 142.5 149 46.3
Peaxi162Scf00476g00039 Petunia axillaris HOM05D003597 ORTHO05D004420 3.5e-32 142.1 150 50.0
FAN13G2877 Fragaria x ananassa HOM05D003597 ORTHO05D004420 1.8e-31 139.8 136 49.3
Lsat_1_v5_gn_6_109621 Lactuca sativa HOM05D003597 ORTHO05D004420 2.3e-31 139.4 147 47.6
Carub.0002s2470 Capsella rubella HOM05D003597 ORTHO05D004420 3.9e-31 138.7 147 49.7
AUR62023609 Chenopodium quinoa HOM05D003597 ORTHO05D004420 3.9e-31 138.7 145 45.5
EL10Ac1g00040 Beta vulgaris HOM05D003597 ORTHO05D004420 1.1e-30 137.1 147 44.9
Nitab4.5_0000051g0110 Nicotiana tabacum HOM05D003597 ORTHO05D004420 1.9e-30 136.3 150 48.7
ATR0121G011 Amborella trichopoda HOM05D003597 ORTHO05D004420 2.5e-30 136.0 149 51.0
AUR62004693 Chenopodium quinoa HOM05D003597 ORTHO05D004420 2.5e-30 136.0 146 43.8
Hund27061 Selenicereus undatus HOM05D003597 ORTHO05D004420 7.4e-30 134.4 146 43.2
Aa31LG4G7900 Aethionema arabicum HOM05D003597 ORTHO05D004420 4.8e-29 131.7 180 40.6
Thhalv10018012m.g Eutrema salsugineum HOM05D003597 ORTHO05D004420 1.1e-28 130.6 148 47.3
HPP92_004068 Vanilla planifolia HOM05D003597 ORTHO05D004420 9.0e-28 127.5 139 46.8
HPP92_004120 Vanilla planifolia HOM05D003597 ORTHO05D004420 9.0e-28 127.5 139 46.8
CDE06G1078 Ceratophyllum demersum HOM05D003597 ORTHO05D004420 2.0e-27 126.3 119 48.7
Sc01g0001560 Simmondsia chinensis HOM05D003597 ORTHO05D004420 2.0e-27 126.3 148 44.6
unitig_0.g2128 Utricularia gibba HOM05D003597 ORTHO05D004420 4.5e-27 125.2 107 50.5
Hma1.2p1_0221F.1_g093170 Hydrangea macrophylla HOM05D003597 ORTHO05D004420 1.3e-26 123.6 103 52.4
SEGI_09945 Sequoiadendron giganteum HOM05D003597 ORTHO05D004420 4.9e-26 121.7 150 42.0
DCAR_014282 Daucus carota HOM05D003597 ORTHO05D004420 1.9e-25 119.8 84 59.5
SHI31223 Sapria himalayana HOM05D003597 ORTHO05D004420 1.6e-24 116.7 158 41.1
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 1.3e-23 113.6 157 40.8
Zm00001eb193530 Zea mays HOM05D003597 ORTHO05D004420 5.1e-23 111.7 150 40.0
Zm00001eb278990 Zea mays HOM05D003597 ORTHO05D004420 1.1e-22 110.5 141 41.1
CDE06G0857 Ceratophyllum demersum HOM05D003597 ORTHO05D004420 7.4e-22 107.8 120 44.2
Psat7g089080 Pisum sativum HOM05D000917 ORTHO05D000764 1.3e-21 107.1 86 53.5
Zm00001eb256170 Zea mays HOM05D003597 ORTHO05D004420 4.0e-20 102.1 138 38.4
Psat1g136880 Pisum sativum HOM05D003597 ORTHO05D004420 1.0e-18 97.4 86 50.0
CDE10G1110 Ceratophyllum demersum HOM05D003597 ORTHO05D004420 7.1e-17 91.3 108 42.6
Rhsim06G0118900 Rhododendron simsii HOM05D003597 ORTHO05D004420 4.6e-16 88.6 140 38.6
SMO351G0114 Selaginella moellendorffii HOM05D003597 ORTHO05D004420 1.6e-13 80.1 114 38.6
Actinidia02593 Actinidia chinensis HOM05D003597 ORTHO05D004420 1.5e-11 73.6 40 75.0
CBR_g22311 Chara braunii HOM05D003597 ORTHO05D004420 5.9e-11 71.6 101 35.6
Pp3c11_12900 Physcomitrium patens HOM05D003597 ORTHO05D004420 1.3e-10 70.5 94 36.2
AagrBONN_evm.TU.Sc2ySwM_344.1361 Anthoceros agrestis HOM05D003597 ORTHO05D004420 1.9e-09 66.6 135 29.6
Lsat_1_v5_gn_4_129001 Lactuca sativa HOM05D000021 ORTHO05D000010 3.2e-09 65.9 51 51.0
MCO07G030 Micromonas commoda HOM05D003597 ORTHO05D006658 3.2e-09 65.9 88 36.4
Pp3c9_22160 Physcomitrium patens HOM05D000590 ORTHO05D006658 1.4e-07 60.5 99 30.3
Zm00001eb268330 Zea mays HOM05D003597 ORTHO05D004420 1.4e-07 60.5 37 62.2
Pp3c15_18060 Physcomitrium patens HOM05D000590 ORTHO05D006658 5.1e-07 58.5 104 30.8
Medtr8g005245 Medicago truncatula HOM05D003597 ORTHO05D004420 6.7e-07 58.2 67 50.7
A05p34710 Brassica napus HOM05D000590 ORTHO05D006658 8.8e-07 57.8 94 33.0
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 1.1e-06 57.4 35 71.4
AagrBONN_evm.TU.Sc2ySwM_344.1598 Anthoceros agrestis HOM05D000590 ORTHO05D006658 2.0e-06 56.6 99 31.3
Cfa024843 Carpinus fangiana HOM05D003597 ORTHO05D006658 3.3e-06 55.8 96 30.2
BcaB06g25360 Brassica carinata HOM05D000590 ORTHO05D006658 7.4e-06 54.7 94 33.0


User provided reference genes

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