Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02504 Aquilegia oxysepala HOM05D003597 ORTHO05D004420 3.4e-70 268.1 124 100.0
Aqoxy5G02474 Aquilegia oxysepala HOM05D003597 ORTHO05D004420 2.8e-40 168.7 82 91.5
TAR197G0005 Trochodendron aralioides HOM05D003597 ORTHO05D004420 4.5e-30 134.8 82 72.0
Nn5g27956 Nelumbo nucifera HOM05D003597 ORTHO05D004420 2.2e-29 132.5 82 70.7
MBI03_g11136_MAGBIO Magnolia biondii HOM05D003597 ORTHO05D004420 1.5e-28 129.8 84 70.2
AUR62004693 Chenopodium quinoa HOM05D003597 ORTHO05D004420 1.9e-28 129.4 83 67.5
Lalb_Chr11g0065691 Lupinus albus HOM05D003597 ORTHO05D004420 4.2e-28 128.3 82 65.9
Prupe.1G506100 Prunus persica HOM05D003597 ORTHO05D004420 5.5e-28 127.9 83 65.1
EL10Ac1g00040 Beta vulgaris HOM05D003597 ORTHO05D004420 7.2e-28 127.5 83 67.5
Duzib093G1782 Durio zibethinus HOM05D003597 ORTHO05D004420 1.2e-27 126.7 83 66.3
MD08G1173200 Malus domestica HOM05D003597 ORTHO05D004420 1.2e-27 126.7 83 66.3
MD15G1358500 Malus domestica HOM05D003597 ORTHO05D004420 1.6e-27 126.3 83 65.1
Atru.chr13.1317 Acer truncatum HOM05D003597 ORTHO05D004420 2.1e-27 125.9 82 65.9
Atru.chr13.1361 Acer truncatum HOM05D003597 ORTHO05D004420 2.1e-27 125.9 82 65.9
Dinv26719 Davidia involucrata HOM05D003597 ORTHO05D004420 4.7e-27 124.8 82 68.3
Lalb_Chr08g0241721 Lupinus albus HOM05D003597 ORTHO05D004420 4.7e-27 124.8 82 65.9
ECA246G2386 Erigeron canadensis HOM05D003597 ORTHO05D004420 6.1e-27 124.4 79 64.6
COL.COLO4_03393 Corchorus olitorius HOM05D003597 ORTHO05D004420 8.0e-27 124.0 83 63.9
Duzib041G0227 Durio zibethinus HOM05D003597 ORTHO05D004420 8.0e-27 124.0 82 65.9
Nitab4.5_0000051g0110 Nicotiana tabacum HOM05D003597 ORTHO05D004420 8.0e-27 124.0 82 67.1
Nitab4.5_0002496g0040 Nicotiana tabacum HOM05D003597 ORTHO05D004420 8.0e-27 124.0 82 67.1
GSVIVG01008944001 Vitis vinifera HOM05D003597 ORTHO05D004420 8.0e-27 124.0 83 68.7
Glyma.06G108500 Glycine max HOM05D003597 ORTHO05D004420 1.8e-26 122.9 82 67.1
Lsat_1_v5_gn_6_109621 Lactuca sativa HOM05D003597 ORTHO05D004420 3.0e-26 122.1 80 61.2
Oeu030027.4 Olea europaea HOM05D003597 ORTHO05D004420 3.0e-26 122.1 82 64.6
THA.LOC104800176 Tarenaya hassleriana HOM05D003597 ORTHO05D004420 3.0e-26 122.1 83 66.3
Cpa.g.c31003 Carica papaya HOM05D003597 ORTHO05D004420 4.0e-26 121.7 82 65.9
Ciclev10000027m.g Citrus clementina HOM05D003597 ORTHO05D004420 4.0e-26 121.7 82 62.2
Gorai.002G220300 Gossypium raimondii HOM05D003597 ORTHO05D004420 5.2e-26 121.3 83 63.9
HanXRQChr05g0150511 Helianthus annuus HOM05D003597 ORTHO05D004420 5.2e-26 121.3 80 62.5
Actinidia23041 Actinidia chinensis HOM05D003597 ORTHO05D004420 6.7e-26 120.9 82 64.6
Thecc.08G116700 Theobroma cacao HOM05D003597 ORTHO05D004420 6.7e-26 120.9 83 65.1
Glyma.04G253800 Glycine max HOM05D003597 ORTHO05D004420 8.8e-26 120.6 82 65.9
Gohir.D01G182100 Gossypium hirsutum HOM05D003597 ORTHO05D004420 8.8e-26 120.6 83 63.9
Sed0005676 Sechium edule HOM05D003597 ORTHO05D004420 8.8e-26 120.6 81 69.1
Lj1g0013609 Lotus japonicus HOM05D003597 ORTHO05D004420 1.1e-25 120.2 82 64.6
Thhalv10018012m.g Eutrema salsugineum HOM05D003597 ORTHO05D004420 1.5e-25 119.8 82 65.9
Medtr3g073320 Medicago truncatula HOM05D003597 ORTHO05D004420 1.5e-25 119.8 82 65.9
Rhsim06G0109200 Rhododendron simsii HOM05D003597 ORTHO05D004420 1.5e-25 119.8 81 66.7
Solyc11g013530.3 Solanum lycopersicum HOM05D003597 ORTHO05D004420 1.5e-25 119.8 82 64.6
Sopen11g008560 Solanum pennellii HOM05D003597 ORTHO05D004420 1.5e-25 119.8 82 64.6
vmacro12529 Vaccinium macrocarpon HOM05D003597 ORTHO05D004420 1.5e-25 119.8 82 65.9
Phvul.009G025800 Phaseolus vulgaris HOM05D003597 ORTHO05D004420 2.0e-25 119.4 82 64.6
Psat5g134160 Pisum sativum HOM05D003597 ORTHO05D004420 2.6e-25 119.0 82 64.6
Potri.002G089400 Populus trichocarpa HOM05D003597 ORTHO05D004420 2.6e-25 119.0 82 59.8
TWI36G0588 Tripterygium wilfordii HOM05D003597 ORTHO05D004420 3.3e-25 118.6 82 64.6
DCAR_031233 Daucus carota HOM05D003597 ORTHO05D004420 4.4e-25 118.2 82 62.2
Lj4C579G4 Lonicera japonica HOM05D003597 ORTHO05D004420 4.4e-25 118.2 82 64.6
Peaxi162Scf00476g00039 Petunia axillaris HOM05D003597 ORTHO05D004420 4.4e-25 118.2 82 62.2
VMungo1309G0254 Vigna mungo HOM05D003597 ORTHO05D004420 4.4e-25 118.2 82 64.6
CAN.G255.18 Capsicum annuum HOM05D003597 ORTHO05D004420 5.7e-25 117.9 82 62.2
MELO3C022786.2 Cucumis melo HOM05D003597 ORTHO05D004420 5.7e-25 117.9 81 66.7
FvH4_5g38940 Fragaria vesca HOM05D003597 ORTHO05D004420 5.7e-25 117.9 83 61.4
FAN18G1206 Fragaria x ananassa HOM05D003597 ORTHO05D004420 5.7e-25 117.9 83 61.4
CiPaw.06G024800 Carya illinoinensis HOM05D003597 ORTHO05D004420 7.5e-25 117.5 82 64.6
CsaV3_5G023530 Cucumis sativus L. HOM05D003597 ORTHO05D004420 7.5e-25 117.5 81 66.7
CiPaw.05G229100 Carya illinoinensis HOM05D003597 ORTHO05D004420 9.7e-25 117.1 82 59.8
Ca_25762_v3 Cicer arietinum L. HOM05D003597 ORTHO05D004420 9.7e-25 117.1 82 65.9
PSO017G6492 Papaver somniferum HOM05D003597 ORTHO05D004420 1.3e-24 116.7 84 63.1
PSO170G0537 Papaver somniferum HOM05D003597 ORTHO05D004420 1.3e-24 116.7 84 63.1
AUR62023609 Chenopodium quinoa HOM05D003597 ORTHO05D004420 1.7e-24 116.3 74 66.2
Cc00_g02330 Coffea canephora HOM05D003597 ORTHO05D004420 1.7e-24 116.3 82 62.2
FAN04G0001 Fragaria x ananassa HOM05D003597 ORTHO05D004420 1.7e-24 116.3 83 60.2
FAN08G0909 Fragaria x ananassa HOM05D003597 ORTHO05D004420 1.7e-24 116.3 83 60.2
RcHm_v2.0_Chr7g0240911 Rosa chinensis HOM05D003597 ORTHO05D004420 1.7e-24 116.3 83 60.2
Manes.18G072800 Manihot esculenta HOM05D003597 ORTHO05D004420 2.2e-24 115.9 82 59.8
Sabra02G0070400 Salix brachista HOM05D003597 ORTHO05D004420 2.2e-24 115.9 82 57.3
CANSAT25G1161 Cannabis sativa HOM05D003597 ORTHO05D004420 2.8e-24 115.5 83 62.7
Haze_00524 Corylus avellana HOM05D003597 ORTHO05D004420 2.8e-24 115.5 82 61.0
Carub.0002s2470 Capsella rubella HOM05D003597 ORTHO05D004420 3.7e-24 115.2 82 61.0
ClCG03G009090 Citrullus lanatus HOM05D003597 ORTHO05D004420 3.7e-24 115.2 81 65.4
Migut.C01191 Erythranthe guttata HOM05D003597 ORTHO05D004420 3.7e-24 115.2 82 62.2
Oeu043794.4 Olea europaea HOM05D003597 ORTHO05D004420 3.7e-24 115.2 82 61.0
QL12p035319 Quercus lobata HOM05D003597 ORTHO05D004420 3.7e-24 115.2 82 61.0
SalBow7G0935 Salvia bowleyana HOM05D003597 ORTHO05D004420 3.7e-24 115.2 82 61.0
SalBow7G4807 Salvia bowleyana HOM05D003597 ORTHO05D004420 3.7e-24 115.2 82 61.0
Aa31LG4G7900 Aethionema arabicum HOM05D003597 ORTHO05D004420 4.8e-24 114.8 82 62.2
SGA_v2.0_scaffold118G32437 Striga asiatica HOM05D003597 ORTHO05D004420 4.8e-24 114.8 82 59.8
FAN13G2877 Fragaria x ananassa HOM05D003597 ORTHO05D004420 6.3e-24 114.4 82 59.8
TWI56G1037 Tripterygium wilfordii HOM05D003597 ORTHO05D004420 6.3e-24 114.4 73 64.4
Cfa015958 Carpinus fangiana HOM05D003597 ORTHO05D004420 1.1e-23 113.6 82 59.8
AT1G77800 Arabidopsis thaliana HOM05D003597 ORTHO05D004420 1.4e-23 113.2 82 63.4
MSTRG.25418 Avicennia marina HOM05D003597 ORTHO05D004420 1.4e-23 113.2 82 59.8
Gohir.A01G187600 Gossypium hirsutum HOM05D003597 ORTHO05D004420 1.4e-23 113.2 83 60.2
AL2G38040 Arabidopsis lyrata HOM05D003597 ORTHO05D004420 1.8e-23 112.8 82 61.0
Sp5g32980 Schrenkiella parvula HOM05D003597 ORTHO05D004420 1.8e-23 112.8 82 62.2
Dinv27385 Davidia involucrata HOM05D003597 ORTHO05D004420 2.4e-23 112.5 73 68.5
TPR.G32944 Trifolium pratense HOM05D003597 ORTHO05D004420 3.1e-23 112.1 83 65.1
MSTRG.1487 Avicennia marina HOM05D003597 ORTHO05D004420 4.1e-23 111.7 82 61.0
CDE06G0857 Ceratophyllum demersum HOM05D003597 ORTHO05D004420 4.1e-23 111.7 85 60.0
Potri.005G171800 Populus trichocarpa HOM05D003597 ORTHO05D004420 4.1e-23 111.7 82 56.1
TWI12G1217 Tripterygium wilfordii HOM05D003597 ORTHO05D004420 5.3e-23 111.3 72 65.3
CARHR071300 Cardamine hirsuta HOM05D003597 ORTHO05D004420 7.0e-23 110.9 82 61.0
CDE06G1078 Ceratophyllum demersum HOM05D003597 ORTHO05D004420 7.0e-23 110.9 85 60.0
Eucgr.F03741 Eucalyptus grandis HOM05D003597 ORTHO05D004420 7.0e-23 110.9 82 59.8
arahy.Tifrunner.gnm1.ann1.WJPD8A Arachis hypogaea HOM05D003597 ORTHO05D004420 9.1e-23 110.5 82 62.2
arahy.Tifrunner.gnm1.ann1.Y09WXD Arachis hypogaea HOM05D003597 ORTHO05D004420 9.1e-23 110.5 82 62.2
Lalb_Chr17g0344031 Lupinus albus HOM05D003597 ORTHO05D004420 9.1e-23 110.5 88 59.1
MBI06_g01044_MAGBIO Magnolia biondii HOM05D003597 ORTHO05D004420 9.1e-23 110.5 85 57.6
Gohir.A06G040800 Gossypium hirsutum HOM05D003597 ORTHO05D004420 1.2e-22 110.2 83 57.8
Gohir.D06G041800 Gossypium hirsutum HOM05D003597 ORTHO05D004420 1.2e-22 110.2 83 57.8
Gorai.010G047000 Gossypium raimondii HOM05D003597 ORTHO05D004420 1.6e-22 109.8 83 57.8
THA.LOC104813639 Tarenaya hassleriana HOM05D003597 ORTHO05D004420 1.6e-22 109.8 83 59.0
PGR042G3777 Punica granatum HOM05D003597 ORTHO05D004420 2.0e-22 109.4 82 59.8
CSS0024515 Camellia sinensis var. sinensis HOM05D003597 ORTHO05D004420 2.7e-22 109.0 73 64.4
Sc01g0001560 Simmondsia chinensis HOM05D003597 ORTHO05D004420 2.7e-22 109.0 75 65.3
BcaB05g25080 Brassica carinata HOM05D003597 ORTHO05D004420 4.5e-22 108.2 82 58.5
BcaB03g15920 Brassica carinata HOM05D003597 ORTHO05D004420 1.3e-21 106.7 82 57.3
BcaC08g47623 Brassica carinata HOM05D003597 ORTHO05D004420 1.7e-21 106.3 82 57.3
A07p43090 Brassica napus HOM05D003597 ORTHO05D004420 1.7e-21 106.3 82 57.3
C06p51740 Brassica napus HOM05D003597 ORTHO05D004420 1.7e-21 106.3 82 57.3
BolC6t40196H Brassica oleracea HOM05D003597 ORTHO05D004420 1.7e-21 106.3 82 57.3
BraA07t31831Z Brassica rapa HOM05D003597 ORTHO05D004420 1.7e-21 106.3 82 57.3
unitig_0.g2128 Utricularia gibba HOM05D003597 ORTHO05D004420 2.9e-21 105.5 82 54.9
HPP92_004120 Vanilla planifolia HOM05D003597 ORTHO05D004420 6.5e-21 104.4 84 58.3
Sabra05G0129300 Salix brachista HOM05D003597 ORTHO05D004420 1.9e-20 102.8 82 51.2
HPP92_004068 Vanilla planifolia HOM05D003597 ORTHO05D004420 2.5e-20 102.4 74 59.5
A02p21890 Brassica napus HOM05D003597 ORTHO05D004420 3.2e-20 102.1 82 54.9
BraA02t07190Z Brassica rapa HOM05D003597 ORTHO05D004420 3.2e-20 102.1 82 54.9
BcaC03g15776 Brassica carinata HOM05D003597 ORTHO05D004420 4.2e-20 101.7 82 54.9
C02p35180 Brassica napus HOM05D003597 ORTHO05D004420 4.2e-20 101.7 82 54.9
BolC2t09533H Brassica oleracea HOM05D003597 ORTHO05D004420 4.2e-20 101.7 82 54.9
ATR0121G011 Amborella trichopoda HOM05D003597 ORTHO05D004420 1.2e-19 100.1 84 52.4
Zm00001eb256170 Zea mays HOM05D003597 ORTHO05D004420 4.7e-19 98.2 82 50.0
Hund27061 Selenicereus undatus HOM05D003597 ORTHO05D004420 2.3e-18 95.9 83 55.4
Zm00001eb193530 Zea mays HOM05D003597 ORTHO05D004420 6.8e-18 94.4 80 47.5
Ah.05g172620 Amaranthus hybridus HOM05D003597 ORTHO05D004420 4.4e-17 91.7 83 53.0
SGA_v2.0_scaffold24G10505 Striga asiatica HOM05D003597 ORTHO05D004420 7.5e-17 90.9 81 54.3
DCAR_014282 Daucus carota HOM05D003597 ORTHO05D004420 1.7e-16 89.7 59 62.7
Zm00001eb278990 Zea mays HOM05D003597 ORTHO05D004420 6.3e-16 87.8 77 55.8
Zm00001eb051540 Zea mays HOM05D003597 ORTHO05D004420 2.4e-15 85.9 80 47.5
Zm00001eb051550 Zea mays HOM05D003597 ORTHO05D004420 2.4e-15 85.9 80 47.5
Zm00001eb268330 Zea mays HOM05D003597 ORTHO05D004420 2.4e-15 85.9 80 47.5
SEGI_09945 Sequoiadendron giganteum HOM05D003597 ORTHO05D004420 2.2e-13 79.3 68 47.1
SMO351G0114 Selaginella moellendorffii HOM05D003597 ORTHO05D004420 4.2e-12 75.1 72 44.4
CDE10G1110 Ceratophyllum demersum HOM05D003597 ORTHO05D004420 1.6e-11 73.2 73 47.9
Pp3c11_12900 Physcomitrium patens HOM05D003597 ORTHO05D004420 2.1e-11 72.8 64 51.6
MBI19_g41373_MAGBIO Magnolia biondii HOM05D002440 ORTHO05D002576 2.3e-10 69.3 84 40.5
CBR_g22311 Chara braunii HOM05D003597 ORTHO05D004420 4.0e-10 68.6 74 43.2
Actinidia23047 Actinidia chinensis HOM05D003597 ORTHO05D004420 7.5e-09 64.3 55 49.1
MBI18_g38455_MAGBIO Magnolia biondii HOM05D003597 ORTHO05D004420 7.5e-09 64.3 49 53.1
Cre14.g614151 Chlamydomonas reinhardtii HOM05D003597 ORTHO05D006658 4.9e-08 61.6 65 47.7
MCO11G897 Micromonas commoda HOM05D003597 ORTHO05D006658 2.4e-07 59.3 65 43.1
Cre17.g745347 Chlamydomonas reinhardtii HOM05D003597 ORTHO05D006658 1.2e-06 57.0 65 46.2


User provided reference genes

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