Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G01371 Aquilegia oxysepala HOM05D006001 ORTHO05D006714 4.9e-180 634.8 434 100.0
TAR381G0479 Trochodendron aralioides HOM05D006001 ORTHO05D006714 2.2e-39 167.5 432 35.2
Dinv42605 Davidia involucrata HOM05D006001 ORTHO05D006714 6.6e-36 156.0 419 37.0
GSVIVG01009188001 Vitis vinifera HOM05D006001 ORTHO05D006714 5.8e-32 142.9 437 35.2
Nn6g34170 Nelumbo nucifera HOM05D006001 ORTHO05D006714 2.4e-30 137.5 432 31.9
Thecc.08G071800 Theobroma cacao HOM05D006001 ORTHO05D006714 1.5e-27 128.3 441 31.3
DCAR_023481 Daucus carota HOM05D006001 ORTHO05D006714 2.8e-26 124.0 429 32.4
MBI16_g12475_MAGBIO Magnolia biondii HOM05D006001 ORTHO05D006714 3.6e-26 123.6 448 29.0
QL09p017955 Quercus lobata HOM05D006001 ORTHO05D006714 1.1e-25 122.1 437 34.3
PSO210G5625 Papaver somniferum HOM05D006001 ORTHO05D006714 1.2e-24 118.6 425 30.4
Eucgr.H00032 Eucalyptus grandis HOM05D006001 ORTHO05D006714 4.9e-23 113.2 423 28.4
PSO170G4643 Papaver somniferum HOM05D006001 ORTHO05D006714 8.4e-23 112.5 424 32.3
Cfa013804 Carpinus fangiana HOM05D006001 ORTHO05D006714 3.2e-22 110.5 443 34.5
Eucgr.L02666 Eucalyptus grandis HOM05D006001 ORTHO05D006714 2.1e-21 107.8 423 27.9
Haze_22467 Corylus avellana HOM05D006001 ORTHO05D006714 1.3e-20 105.1 440 34.5
Prupe.1G533200 Prunus persica HOM05D006001 ORTHO05D006714 3.9e-20 103.6 442 41.6
Oeu063699.1 Olea europaea HOM05D006001 ORTHO05D006714 5.1e-20 103.2 428 30.1
QL12p023212 Quercus lobata HOM05D006001 ORTHO05D006714 1.9e-19 101.3 443 30.5
MD08G1199700 Malus domestica HOM05D006001 ORTHO05D006714 2.5e-19 100.9 421 38.0
Duzib128G1071 Durio zibethinus HOM05D006001 ORTHO05D006714 3.3e-19 100.5 455 32.1
CiPaw.03G148200 Carya illinoinensis HOM05D006001 ORTHO05D006714 2.8e-18 97.4 444 28.4
ATR0767G016 Amborella trichopoda HOM05D006001 ORTHO05D006714 4.8e-18 96.7 437 30.7
Peaxi162Scf00160g00103 Petunia axillaris HOM05D006001 ORTHO05D006714 8.1e-18 95.9 434 28.8
Potri.005G153300 Populus trichocarpa HOM05D006001 ORTHO05D006714 8.1e-18 95.9 439 26.9
Duzib106G1137 Durio zibethinus HOM05D006001 ORTHO05D006714 1.1e-17 95.5 465 32.0
Atru.chr13.1002 Acer truncatum HOM05D006001 ORTHO05D006714 3.1e-17 94.0 444 28.6
Ciclev10001506m.g Citrus clementina HOM05D006001 ORTHO05D006714 4.0e-17 93.6 447 36.0
Haze_22468 Corylus avellana HOM05D006001 ORTHO05D006714 1.2e-16 92.0 448 33.7
TAR376G0788 Trochodendron aralioides HOM05D006001 ORTHO05D006714 4.5e-16 90.1 320 26.9
Nn5g29866 Nelumbo nucifera HOM05D006001 ORTHO05D006714 7.6e-16 89.4 377 27.9
TWI12G0152 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 1.7e-15 88.2 102 52.9
CSS0018086 Camellia sinensis var. sinensis HOM05D006001 ORTHO05D006714 4.9e-15 86.7 419 36.0
COL.COLO4_35255 Corchorus olitorius HOM05D006001 ORTHO05D006714 4.9e-15 86.7 444 30.9
Actinidia19626 Actinidia chinensis HOM05D006001 ORTHO05D006714 1.4e-14 85.1 418 36.6
Manes.18G058066 Manihot esculenta HOM05D006001 ORTHO05D006714 1.4e-14 85.1 434 28.3
CiPaw.07G164600 Carya illinoinensis HOM05D006001 ORTHO05D006714 1.9e-14 84.7 456 26.1
Cc00_g15770 Coffea canephora HOM05D006001 ORTHO05D006714 1.9e-14 84.7 429 27.3
MELO3C021835.2 Cucumis melo HOM05D006001 ORTHO05D006714 1.9e-14 84.7 439 28.7
Cpa.g.c29936.2 Carica papaya HOM05D006001 ORTHO05D006714 4.2e-14 83.6 435 30.1
Nitab4.5_0000354g0120 Nicotiana tabacum HOM05D006001 ORTHO05D006714 4.2e-14 83.6 428 32.2
Oeu034401.1 Olea europaea HOM05D006001 ORTHO05D006714 1.2e-13 82.0 452 31.0
CDE06G2159 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 2.1e-13 81.3 106 45.3
Lj4A738G22 Lonicera japonica HOM05D006001 ORTHO05D006714 4.6e-13 80.1 444 40.3
TWI56G0486 Tripterygium wilfordii HOM05D006001 ORTHO05D006714 4.6e-13 80.1 435 32.9
Sabra02G0088000 Salix brachista HOM05D006001 ORTHO05D006714 1.8e-12 78.2 446 26.0
SGA_v2.0_scaffold24G10238 Striga asiatica HOM05D006001 ORTHO05D006714 1.8e-12 78.2 432 26.2
ClCG09G016810 Citrullus lanatus HOM05D006001 ORTHO05D006714 3.9e-12 77.0 436 28.2
AT4G24500 Arabidopsis thaliana HOM05D006001 ORTHO05D006714 5.1e-12 76.6 433 27.9
SGA_v2.0_scaffold20G09128 Striga asiatica HOM05D006001 ORTHO05D006714 5.1e-12 76.6 422 26.8
CAN.G1700.2 Capsicum annuum HOM05D006001 ORTHO05D006714 8.7e-12 75.9 434 29.5
BcaC09g50862 Brassica carinata HOM05D006001 ORTHO05D006714 1.5e-11 75.1 433 27.5
Rhsim07G0212300 Rhododendron simsii HOM05D006001 ORTHO05D006714 1.5e-11 75.1 428 37.9
Potri.002G111500 Populus trichocarpa HOM05D006001 ORTHO05D006714 1.9e-11 74.7 173 37.0
SalBow7G4402 Salvia bowleyana HOM05D006001 ORTHO05D006714 3.3e-11 73.9 439 27.1
Nitab4.5_0019796g0010 Nicotiana tabacum HOM05D006001 ORTHO05D006714 4.3e-11 73.6 95 46.3
MELO3C008828.2 Cucumis melo HOM05D006001 ORTHO05D006714 5.6e-11 73.2 438 27.9
Dinv44865 Davidia involucrata HOM05D006001 ORTHO05D006714 5.6e-11 73.2 98 40.8
BraA01t01521Z Brassica rapa HOM05D002298 ORTHO05D006714 7.4e-11 72.8 433 27.3
Lsat_1_v5_gn_3_133380 Lactuca sativa HOM05D006001 ORTHO05D006714 9.6e-11 72.4 431 29.2
A01p15870 Brassica napus HOM05D002298 ORTHO05D006714 1.3e-10 72.0 428 26.6
Glyma.02G215100 Glycine max HOM05D006001 ORTHO05D006714 1.3e-10 72.0 441 28.6
BolC1t01909H Brassica oleracea HOM05D002298 ORTHO05D006714 4.8e-10 70.1 432 27.1
CDE04G0496 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 4.8e-10 70.1 421 24.9
PGSC0003DMG400002050 Solanum tuberosum HOM05D006001 ORTHO05D006714 4.8e-10 70.1 440 31.4
FAN08G3160 Fragaria x ananassa HOM05D006001 ORTHO05D006714 6.2e-10 69.7 174 33.9
PGR042G0630 Punica granatum HOM05D006001 ORTHO05D006714 6.2e-10 69.7 436 24.1
CDE06G1720 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 8.1e-10 69.3 149 36.2
Psat2g065160 Pisum sativum HOM05D006001 ORTHO05D006714 1.1e-09 68.9 436 27.5
Thhalv10025760m.g Eutrema salsugineum HOM05D006001 ORTHO05D006714 1.4e-09 68.6 433 27.0
PSO144G0019 Papaver somniferum HOM05D006001 ORTHO05D006714 1.4e-09 68.6 63 55.6
RcHm_v2.0_Chr7g0235791 Rosa chinensis HOM05D006001 ORTHO05D006714 1.4e-09 68.6 180 31.7
Gorai.009G346500 Gossypium raimondii HOM05D006001 ORTHO05D006714 1.8e-09 68.2 434 29.5
C01p19810 Brassica napus HOM05D002298 ORTHO05D006714 2.4e-09 67.8 428 26.4
EL10Ac1g00506 Beta vulgaris HOM05D034668 ORTHO05D006714 3.1e-09 67.4 152 33.6
arahy.Tifrunner.gnm1.ann1.5459VI Arachis hypogaea HOM05D006001 ORTHO05D006714 4.0e-09 67.0 435 26.0
CsaV3_2G036230 Cucumis sativus L. HOM05D006001 ORTHO05D006714 4.0e-09 67.0 430 27.0
Sopen12g030020 Solanum pennellii HOM05D006001 ORTHO05D006714 6.9e-09 66.2 442 31.7
Ca_05452_v3 Cicer arietinum L. HOM05D006001 ORTHO05D006714 9.0e-09 65.9 432 28.5
DCAR_002596 Daucus carota HOM05D006001 ORTHO05D006714 9.0e-09 65.9 159 34.6
Sc04g0007160 Simmondsia chinensis HOM05D006001 ORTHO05D006714 9.0e-09 65.9 436 24.5
CANSAT11G1699 Cannabis sativa HOM05D006001 ORTHO05D006714 1.5e-08 65.1 421 25.7
Sed0021215 Sechium edule HOM05D006001 ORTHO05D006714 1.5e-08 65.1 107 44.9
Hund26817 Selenicereus undatus HOM05D006001 ORTHO05D006714 2.6e-08 64.3 425 29.4
Gohir.D05G322800 Gossypium hirsutum HOM05D006001 ORTHO05D006714 3.4e-08 63.9 449 25.4
THA.LOC104806890 Tarenaya hassleriana HOM05D006001 ORTHO05D006714 3.4e-08 63.9 428 28.0
DCAR_000919 Daucus carota HOM05D006001 ORTHO05D006714 4.5e-08 63.5 158 33.5
HanXRQChr03g0093751 Helianthus annuus HOM05D006001 ORTHO05D006714 4.5e-08 63.5 435 26.9
Gohir.A05G320600 Gossypium hirsutum HOM05D006001 ORTHO05D006714 5.8e-08 63.2 444 27.5
FAN13G1830 Fragaria x ananassa HOM05D006001 ORTHO05D006714 7.6e-08 62.8 174 32.8
CDE06G2035 Ceratophyllum demersum HOM05D006001 ORTHO05D006714 1.0e-07 62.4 68 48.5
Carub.0007s1657 Capsella rubella HOM05D006001 ORTHO05D006714 1.3e-07 62.0 428 27.1
CARHR231890 Cardamine hirsuta HOM05D006001 ORTHO05D006714 2.2e-07 61.2 420 25.7
Medtr5g066450 Medicago truncatula HOM05D006001 ORTHO05D006714 2.9e-07 60.8 426 25.6
Aa31LG4G9600 Aethionema arabicum HOM05D006001 ORTHO05D006714 4.9e-07 60.1 434 24.4
Migut.C00706 Erythranthe guttata HOM05D006001 ORTHO05D006714 6.5e-07 59.7 160 33.1
Lalb_Chr17g0344581 Lupinus albus HOM05D006001 ORTHO05D006714 6.5e-07 59.7 96 41.7
SEGI_15482 Sequoiadendron giganteum HOM05D006001 ORTHO05D006714 6.5e-07 59.7 118 37.3
HPP92_021096 Vanilla planifolia HOM05D006001 ORTHO05D006714 6.5e-07 59.7 103 41.7
Glyma.14G182400 Glycine max HOM05D006001 ORTHO05D006714 8.4e-07 59.3 461 27.8
FvH4_5g34870 Fragaria vesca HOM05D006001 ORTHO05D006714 1.4e-06 58.5 175 31.4
FAN18G3411 Fragaria x ananassa HOM05D006001 ORTHO05D006714 1.4e-06 58.5 175 31.4
arahy.Tifrunner.gnm1.ann1.X0SJ4P Arachis hypogaea HOM05D006001 ORTHO05D006714 2.5e-06 57.8 437 24.5
HanXRQChr13g0425801 Helianthus annuus HOM05D006001 ORTHO05D006714 4.2e-06 57.0 76 44.7
Nitab4.5_0000131g0110 Nicotiana tabacum HOM05D006001 ORTHO05D006714 4.2e-06 57.0 75 41.3
ECA240G2279 Erigeron canadensis HOM05D006001 ORTHO05D006714 7.1e-06 56.2 117 36.8
AL7G28720 Arabidopsis lyrata HOM05D006001 ORTHO05D006714 9.3e-06 55.8 415 24.6


User provided reference genes

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