Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00925 Aquilegia oxysepala HOM05D002578 ORTHO05D005154 3.2e-81 305.1 157 100.0
HanXRQChr00c0557g0575711 Helianthus annuus HOM05D002578 ORTHO05D005154 9.7e-30 134.0 88 73.9
HanXRQChr01g0020181 Helianthus annuus HOM05D002578 ORTHO05D005154 9.7e-30 134.0 88 73.9
HanXRQChr04g0127451 Helianthus annuus HOM05D002578 ORTHO05D005154 9.7e-30 134.0 88 73.9
HanXRQChr10g0284421 Helianthus annuus HOM05D002578 ORTHO05D005154 9.7e-30 134.0 88 73.9
HanXRQChr10g0318021 Helianthus annuus HOM05D002578 ORTHO05D005154 9.7e-30 134.0 88 73.9
HanXRQChr12g0369891 Helianthus annuus HOM05D002578 ORTHO05D005154 9.7e-30 134.0 88 73.9
HanXRQCPg0580221 Helianthus annuus HOM05D002578 ORTHO05D005154 9.7e-30 134.0 88 73.9
TAR375G1061 Trochodendron aralioides HOM05D002578 ORTHO05D005154 9.7e-30 134.0 84 79.8
PSO548G0101 Papaver somniferum HOM05D002578 ORTHO05D005154 1.4e-28 130.2 84 77.4
DCAR_032524 Daucus carota HOM05D002578 ORTHO05D005154 2.4e-28 129.4 84 76.2
Hma1.2p1_0298F.1_g117740 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 4.1e-28 128.6 84 76.2
Hma1.2p1_0818F.1_g223306 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 4.1e-28 128.6 84 76.2
Lsat_1_v5_gn_3_22620 Lactuca sativa HOM05D002578 ORTHO05D005154 5.3e-28 128.3 88 70.5
Gohir.D11G067600 Gossypium hirsutum HOM05D002578 ORTHO05D005154 7.0e-28 127.9 84 76.2
HanXRQChr14g0432301 Helianthus annuus HOM05D002578 ORTHO05D005154 1.2e-27 127.1 88 70.5
Nitab4.5_0013360g0010 Nicotiana tabacum HOM05D002578 ORTHO05D005154 1.6e-27 126.7 85 72.9
Peaxi162Scf00299g00118 Petunia axillaris HOM05D002578 ORTHO05D005154 2.0e-27 126.3 84 73.8
PGR111G0034 Punica granatum HOM05D002578 ORTHO05D005154 2.7e-27 125.9 83 77.1
CAN.G424.95 Capsicum annuum HOM05D002578 ORTHO05D005154 3.5e-27 125.6 84 73.8
Gohir.1Z049834 Gossypium hirsutum HOM05D002578 ORTHO05D005154 3.5e-27 125.6 84 75.0
Gohir.A12G024500 Gossypium hirsutum HOM05D002578 ORTHO05D005154 3.5e-27 125.6 84 75.0
Hma1.2p1_0104F.1_g050140 Hydrangea macrophylla HOM05D002578 ORTHO05D005154 3.5e-27 125.6 84 75.0
BNapus_Darmor_BZH_scaffold_253p00370 Brassica napus HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
C03p38130 Brassica napus HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
BolSC29t60532H Brassica oleracea HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
BolSC35t60726H Brassica oleracea HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
BolSC56t61245H Brassica oleracea HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
BraA06t25386Z Brassica rapa HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
BraSC103t45443Z Brassica rapa HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
BraSC103t45487Z Brassica rapa HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
BraSC138t45551Z Brassica rapa HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
BraSC59t46568Z Brassica rapa HOM05D002578 ORTHO05D005154 5.9e-27 124.8 84 72.6
ATCG00800 Arabidopsis thaliana HOM05D002578 ORTHO05D005154 7.7e-27 124.4 84 71.4
CARHR282270 Cardamine hirsuta HOM05D002578 ORTHO05D005154 7.7e-27 124.4 84 71.4
Duzib026G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 1.0e-26 124.0 84 73.8
Duzib086G0007 Durio zibethinus HOM05D002578 ORTHO05D005154 1.0e-26 124.0 84 73.8
Duzib125G0004 Durio zibethinus HOM05D002578 ORTHO05D005154 1.0e-26 124.0 84 73.8
Duzib256G0002 Durio zibethinus HOM05D002578 ORTHO05D005154 1.0e-26 124.0 84 73.8
Ah.10g027440 Amaranthus hybridus HOM05D002578 ORTHO05D005154 1.3e-26 123.6 84 71.4
Solyc00g500034.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 1.3e-26 123.6 84 71.4
CAN.G127.12 Capsicum annuum HOM05D002578 ORTHO05D005154 2.2e-26 122.9 88 69.3
Cpa.g.sc0.194 Carica papaya HOM05D002578 ORTHO05D005154 2.9e-26 122.5 82 74.4
Sed0023475 Sechium edule HOM05D002578 ORTHO05D005154 3.8e-26 122.1 84 73.8
Gohir.A08G071000 Gossypium hirsutum HOM05D002578 ORTHO05D005154 6.5e-26 121.3 84 73.8
Sc25g0002070 Simmondsia chinensis HOM05D002578 ORTHO05D005154 6.5e-26 121.3 84 72.6
CSS0047935 Camellia sinensis var. sinensis HOM05D002578 ORTHO05D005154 8.5e-26 120.9 84 69.0
Thhalv10010706m.g Eutrema salsugineum HOM05D002578 ORTHO05D005154 8.5e-26 120.9 83 71.1
Nitab4.5_0004430g0040 Nicotiana tabacum HOM05D002578 ORTHO05D005154 8.5e-26 120.9 84 71.4
SalBow1G1132 Salvia bowleyana HOM05D002578 ORTHO05D005154 1.9e-25 119.8 83 66.3
Gorai.010G148900 Gossypium raimondii HOM05D002578 ORTHO05D005154 2.5e-25 119.4 84 71.4
LjContig00318g0021445 Lotus japonicus HOM05D002578 ORTHO05D005154 4.2e-25 118.6 83 71.1
LjContig00319g0008344 Lotus japonicus HOM05D002578 ORTHO05D005154 4.2e-25 118.6 83 71.1
LjContig00319g0015839 Lotus japonicus HOM05D002578 ORTHO05D005154 4.2e-25 118.6 83 71.1
Potri.017G072340 Populus trichocarpa HOM05D002578 ORTHO05D005154 2.7e-24 115.9 84 67.9
arahy.Tifrunner.gnm1.ann1.ID3W56 Arachis hypogaea HOM05D002578 ORTHO05D005154 6.1e-24 114.8 83 68.7
Lsat_1_v5_gn_3_113300 Lactuca sativa HOM05D002578 ORTHO05D005154 8.0e-24 114.4 88 64.8
arahy.Tifrunner.gnm1.ann1.R0YUWC Arachis hypogaea HOM05D002578 ORTHO05D005154 2.3e-23 112.8 83 67.5
Hund08206 Selenicereus undatus HOM05D002578 ORTHO05D005154 1.2e-22 110.5 89 62.9
Hund29530 Selenicereus undatus HOM05D002578 ORTHO05D005154 1.2e-22 110.5 89 62.9
Lsat_1_v5_gn_5_50461 Lactuca sativa HOM05D002578 ORTHO05D005154 1.5e-22 110.2 81 65.4
HanXRQChr16g0526141 Helianthus annuus HOM05D002578 ORTHO05D005154 9.8e-22 107.5 66 78.8
Lalb_Chr17g0337521 Lupinus albus HOM05D002578 ORTHO05D005154 2.2e-21 106.3 83 66.3
Hund29503 Selenicereus undatus HOM05D002578 ORTHO05D005154 2.2e-21 106.3 88 61.4
Atru.chr11.440 Acer truncatum HOM05D002578 ORTHO05D005154 8.3e-21 104.4 75 72.0
Medtr4g051410 Medicago truncatula HOM05D002578 ORTHO05D005154 2.7e-19 99.4 81 64.2
Nn4g25225 Nelumbo nucifera HOM05D002578 ORTHO05D005154 4.5e-19 98.6 68 73.5
Oeu062830.1 Olea europaea HOM05D002578 ORTHO05D005154 1.0e-18 97.4 84 59.5
Hund28761 Selenicereus undatus HOM05D002578 ORTHO05D005154 1.7e-18 96.7 72 65.3
Gohir.A09G101600 Gossypium hirsutum HOM05D002578 ORTHO05D005154 2.3e-18 96.3 65 73.8
Gorai.011G034100 Gossypium raimondii HOM05D002578 ORTHO05D005154 2.3e-18 96.3 65 73.8
Potri.012G047500 Populus trichocarpa HOM05D002578 ORTHO05D005154 5.0e-18 95.1 64 71.9
Gohir.A12G090125 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.9e-17 93.2 64 73.4
Sed0004436 Sechium edule HOM05D002578 ORTHO05D005154 3.3e-17 92.4 65 72.3
arahy.Tifrunner.gnm1.ann1.I6CLRS Arachis hypogaea HOM05D002578 ORTHO05D005154 2.8e-16 89.4 83 59.0
Sc16g0004460 Simmondsia chinensis HOM05D002578 ORTHO05D005154 2.8e-16 89.4 65 67.7
AL2G20530 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 1.0e-15 87.4 59 71.2
AL2G21750 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 1.0e-15 87.4 59 71.2
AL1G45070 Arabidopsis lyrata HOM05D002578 ORTHO05D005154 5.2e-15 85.1 59 69.5
Gorai.012G056700 Gossypium raimondii HOM05D002578 ORTHO05D005154 5.2e-15 85.1 63 68.3
Eucgr.C03015 Eucalyptus grandis HOM05D002578 ORTHO05D005154 1.2e-14 84.0 52 76.9
Gohir.D04G051050 Gossypium hirsutum HOM05D002578 ORTHO05D005154 1.2e-14 84.0 64 67.2
arahy.Tifrunner.gnm1.ann1.YJ6L74 Arachis hypogaea HOM05D002578 ORTHO05D005154 8.3e-13 77.8 54 72.2
Zm00001eb039190 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Zm00001eb097380 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Zm00001eb115040 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Zm00001eb434870 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Zm00001eb435100 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Zm00001eb435640 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Zm00001eb437960 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Zm00001eb439940 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Zm00001eb439960 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Zm00001eb440780 Zea mays HOM05D002578 ORTHO05D005154 8.3e-13 77.8 96 45.8
Hund30213 Selenicereus undatus HOM05D002578 ORTHO05D005154 2.4e-12 76.3 89 51.7
CAN.G1078.3 Capsicum annuum HOM05D002578 ORTHO05D005154 5.9e-11 71.6 48 72.9
Migut.D01327 Erythranthe guttata HOM05D002578 ORTHO05D005154 7.8e-11 71.2 42 78.6
Solyc12g035880.1 Solanum lycopersicum HOM05D002578 ORTHO05D005154 6.6e-10 68.2 54 63.0
Gorai.001G190500 Gossypium raimondii HOM05D002578 ORTHO05D002698 1.1e-09 67.4 42 76.2
Medtr0002s0790 Medicago truncatula HOM05D002578 ORTHO05D005154 2.5e-09 66.2 111 38.7
Psat4g046880 Pisum sativum HOM05D002578 ORTHO05D005154 9.5e-09 64.3 97 40.2
Psat5g168200 Pisum sativum HOM05D002578 ORTHO05D005154 1.2e-08 63.9 81 44.4
Solyc11g039530.2 Solanum lycopersicum HOM05D002578 ORTHO05D005154 1.2e-08 63.9 51 62.7
MELO3C004853.2 Cucumis melo HOM05D002578 ORTHO05D005154 1.6e-08 63.5 43 72.1
Psat3g190920 Pisum sativum HOM05D002578 ORTHO05D005154 4.7e-08 62.0 81 44.4
CAN.G134.2 Capsicum annuum HOM05D002578 ORTHO05D005154 6.1e-08 61.6 37 81.1
Lsat_1_v5_gn_5_168100 Lactuca sativa HOM05D002578 ORTHO05D005154 1.4e-07 60.5 46 63.0
HanXRQChr16g0503681 Helianthus annuus HOM05D002578 ORTHO05D005154 4.0e-07 58.9 55 54.5
Medtr8g038470 Medicago truncatula HOM05D002578 ORTHO05D005154 2.0e-06 56.6 83 42.2
Lalb_Chr25g0282891 Lupinus albus HOM05D002578 ORTHO05D005154 2.6e-06 56.2 35 77.1
Ah.10g027320 Amaranthus hybridus HOM05D002578 ORTHO05D005154 9.8e-06 54.3 38 63.2
Ciclev10006396m.g Citrus clementina HOM05D002578 ORTHO05D005154 9.8e-06 54.3 40 60.0
SMO086G0021 Selaginella moellendorffii HOM05D002578 ORTHO05D005154 9.8e-06 54.3 94 38.3


User provided reference genes

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