Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 7.9e-146 520.4 258 100.0
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 2.3e-92 342.8 263 68.1
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 8.6e-92 340.9 263 66.9
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 5.2e-89 331.6 262 64.5
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 4.4e-88 328.6 263 62.7
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 1.2e-85 320.5 263 62.0
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 2.1e-85 319.7 255 64.7
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 3.0e-84 315.8 253 64.8
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 6.6e-84 314.7 263 60.8
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 5.6e-83 311.6 260 61.5
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 4.7e-82 308.5 253 62.8
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 6.2e-82 308.1 253 62.5
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 1.1e-81 307.4 263 60.8
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 1.8e-81 306.6 257 60.7
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 5.2e-81 305.1 261 60.5
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.2e-80 303.9 264 61.7
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 1.2e-80 303.9 260 61.5
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.2e-80 303.9 260 61.5
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.5e-80 303.5 260 61.2
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.6e-80 302.8 260 61.2
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.4e-80 302.4 260 61.2
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 4.4e-80 302.0 264 59.1
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 7.6e-80 301.2 260 61.5
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 7.6e-80 301.2 223 70.9
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 9.9e-80 300.8 260 61.2
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 9.9e-80 300.8 260 61.2
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 1.3e-79 300.4 261 60.5
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 1.7e-79 300.1 257 61.1
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 2.9e-79 299.3 267 57.3
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 4.9e-79 298.5 257 60.7
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 6.4e-79 298.1 261 59.4
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 6.4e-79 298.1 263 58.2
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 8.4e-79 297.7 260 59.6
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 1.1e-78 297.4 264 60.2
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 1.4e-78 297.0 260 61.5
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 1.9e-78 296.6 263 58.2
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 3.2e-78 295.8 254 57.9
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 4.2e-78 295.4 260 61.2
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 4.2e-78 295.4 263 57.8
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 4.2e-78 295.4 262 58.0
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 5.4e-78 295.0 268 59.3
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 7.1e-78 294.7 260 60.4
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 7.1e-78 294.7 258 57.4
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 9.3e-78 294.3 264 60.2
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 9.3e-78 294.3 258 59.7
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 9.3e-78 294.3 257 59.9
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 1.6e-77 293.5 268 59.0
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 2.7e-77 292.7 253 60.5
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 2.7e-77 292.7 263 57.4
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 3.5e-77 292.4 264 59.5
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 4.6e-77 292.0 262 57.6
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 6.0e-77 291.6 262 58.8
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 6.0e-77 291.6 257 59.5
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 1.0e-76 290.8 263 57.0
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 1.7e-76 290.0 258 59.3
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 1.7e-76 290.0 256 58.6
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 3.0e-76 289.3 258 59.7
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 5.1e-76 288.5 263 56.7
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 2.5e-75 286.2 264 56.4
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 7.3e-75 284.6 258 55.0
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 7.3e-75 284.6 259 59.5
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 1.6e-74 283.5 266 54.9
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 2.1e-74 283.1 266 54.9
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 2.1e-74 283.1 266 55.3
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 2.1e-74 283.1 259 57.9
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 2.8e-74 282.7 267 55.1
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 3.6e-74 282.3 273 55.7
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 3.6e-74 282.3 258 55.4
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 6.2e-74 281.6 257 57.2
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 8.1e-74 281.2 267 56.2
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 1.1e-73 280.8 256 55.1
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 3.1e-73 279.3 269 53.9
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 6.9e-73 278.1 254 54.7
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 6.9e-73 278.1 254 55.9
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 1.2e-72 277.3 266 52.6
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 1.5e-72 276.9 259 54.8
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 2.6e-72 276.2 260 53.5
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 7.6e-72 274.6 258 53.9
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 2.2e-71 273.1 261 52.9
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 2.2e-71 273.1 261 52.9
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 2.2e-71 273.1 261 52.9
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 2.2e-71 273.1 225 63.6
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 6.4e-71 271.6 260 52.3
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 4.2e-70 268.9 262 53.4
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 1.7e-68 263.5 320 46.6
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 1.7e-68 263.5 258 52.3
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 1.1e-67 260.8 217 62.7
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 3.3e-67 259.2 270 51.1
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 1.6e-66 256.9 190 66.3
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 3.6e-66 255.8 233 56.2
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 1.5e-64 250.4 228 56.1
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 2.0e-64 250.0 228 57.5
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 5.5e-62 241.9 264 50.0
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 3.5e-61 239.2 227 56.4
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 6.0e-61 238.4 266 53.0
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 3.7e-58 229.2 160 78.1
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 3.1e-57 226.1 238 50.4
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 1.7e-55 220.3 238 49.2
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 1.4e-54 217.2 233 49.8
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.2e-53 214.2 167 64.1
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 4.6e-53 212.2 164 64.6
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 3.8e-47 192.6 151 62.9
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 7.4e-43 178.3 183 51.4
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 6.3e-42 175.3 250 42.4
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 1.1e-41 174.5 149 57.0
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 4.1e-41 172.6 148 55.4
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 4.1e-41 172.6 148 55.4
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 4.1e-41 172.6 148 55.4
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 6.5e-39 165.2 149 51.7
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 2.7e-37 159.8 148 54.1
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 1.0e-36 157.9 285 35.4
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 3.3e-35 152.9 214 44.4
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 2.2e-34 150.2 121 58.7
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 3.4e-32 142.9 258 35.3
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 4.5e-32 142.5 167 52.1
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 2.9e-31 139.8 110 61.8
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 1.0e-28 131.3 111 55.9
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 3.8e-23 112.8 98 58.2
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 5.5e-22 109.0 98 56.1
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 1.8e-17 94.0 83 56.6
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 5.3e-17 92.4 81 63.0
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 4.5e-16 89.4 160 35.6
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 4.5e-16 89.4 74 62.2
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 1.5e-14 84.3 94 43.6
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 2.5e-14 83.6 78 57.7
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 2.0e-11 73.9 96 43.8
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 2.0e-11 73.9 157 35.7
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 7.5e-11 72.0 48 68.8
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 1.8e-09 67.4 67 44.8
MD01G1114600 Malus domestica HOM05D005673 ORTHO05D007081 9.4e-06 55.1 68 48.5


User provided reference genes

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