Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03096 Aquilegia oxysepala HOM05D005234 ORTHO05D006583 7.5e-81 303.9 166 100.0
Nn2g10556 Nelumbo nucifera HOM05D005234 ORTHO05D006583 9.9e-41 170.6 144 58.3
TAR623G0173 Trochodendron aralioides HOM05D005234 ORTHO05D006583 7.9e-38 161.0 144 58.3
Dinv31388 Davidia involucrata HOM05D005234 ORTHO05D006583 3.0e-37 159.1 153 54.2
HanXRQChr14g0460751 Helianthus annuus HOM05D005234 ORTHO05D006583 1.3e-35 153.7 106 70.8
QL08p057492 Quercus lobata HOM05D005234 ORTHO05D006583 1.6e-35 153.3 149 53.0
EL10Ac2g03507 Beta vulgaris HOM05D005234 ORTHO05D006583 4.8e-35 151.8 156 50.6
Hund06032 Selenicereus undatus HOM05D005234 ORTHO05D006583 1.4e-34 150.2 143 53.8
PSO063G5764 Papaver somniferum HOM05D005234 ORTHO05D006583 1.8e-34 149.8 111 64.0
Cfa001561 Carpinus fangiana HOM05D005234 ORTHO05D006583 2.4e-34 149.4 106 66.0
Ah.16g107860 Amaranthus hybridus HOM05D005234 ORTHO05D006583 5.3e-34 148.3 109 65.1
Actinidia38226 Actinidia chinensis HOM05D005234 ORTHO05D006583 9.0e-34 147.5 110 63.6
AUR62042662 Chenopodium quinoa HOM05D005234 ORTHO05D006583 1.2e-33 147.1 109 66.1
Thecc.10G063300 Theobroma cacao HOM05D005234 ORTHO05D006583 1.2e-33 147.1 106 65.1
CSS0032920 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 2.6e-33 146.0 109 62.4
Prupe.2G224300 Prunus persica HOM05D005234 ORTHO05D006583 5.8e-33 144.8 106 65.1
COL.COLO4_05802 Corchorus olitorius HOM05D005234 ORTHO05D006583 7.6e-33 144.4 110 60.9
CSS0021401 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D004861 1.0e-32 144.1 109 61.5
CDE04G1829 Ceratophyllum demersum HOM05D005234 ORTHO05D006583 1.0e-32 144.1 106 64.2
Potri.008G047400 Populus trichocarpa HOM05D005234 ORTHO05D006583 1.0e-32 144.1 106 62.3
GSVIVG01032632001 Vitis vinifera HOM05D005234 ORTHO05D006583 1.3e-32 143.7 110 64.5
CiPaw.01G279400 Carya illinoinensis HOM05D005234 ORTHO05D006583 1.7e-32 143.3 106 63.2
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 1.7e-32 143.3 106 64.2
Sc09g0006860 Simmondsia chinensis HOM05D005234 ORTHO05D006583 2.9e-32 142.5 136 55.1
Sabra08G0033600 Salix brachista HOM05D005234 ORTHO05D006583 6.5e-32 141.4 106 60.4
Gorai.012G067000 Gossypium raimondii HOM05D005234 ORTHO05D006583 8.4e-32 141.0 106 61.3
TWI63G0851 Tripterygium wilfordii HOM05D005234 ORTHO05D006583 1.1e-31 140.6 106 61.3
Lalb_Chr06g0164091 Lupinus albus HOM05D005234 ORTHO05D006583 1.4e-31 140.2 110 61.8
FvH4_7g20720 Fragaria vesca HOM05D005234 ORTHO05D006583 1.9e-31 139.8 106 60.4
Gohir.D04G060251 Gossypium hirsutum HOM05D005234 ORTHO05D006583 1.9e-31 139.8 106 61.3
ClCG09G020200 Citrullus lanatus HOM05D005234 ORTHO05D006583 3.2e-31 139.0 160 47.5
MD00G1163800 Malus domestica HOM05D005234 ORTHO05D006583 3.2e-31 139.0 147 49.7
vmacro07108 Vaccinium macrocarpon HOM05D005234 ORTHO05D006583 3.2e-31 139.0 106 61.3
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 5.5e-31 138.3 106 62.3
Gohir.A05G352700 Gossypium hirsutum HOM05D005234 ORTHO05D006583 5.5e-31 138.3 106 60.4
Glyma.10G292500 Glycine max HOM05D005234 ORTHO05D006583 3.5e-30 135.6 102 62.7
VMungo0720G1519 Vigna mungo HOM05D005234 ORTHO05D006583 3.5e-30 135.6 106 60.4
Haze_16968 Corylus avellana HOM05D005234 ORTHO05D006583 6.0e-30 134.8 98 65.3
Eucgr.J01148 Eucalyptus grandis HOM05D005234 ORTHO05D006583 6.0e-30 134.8 106 63.2
Duzib114G0593 Durio zibethinus HOM05D005234 ORTHO05D006583 7.9e-30 134.4 110 60.0
FAN01G2148 Fragaria x ananassa HOM05D005234 ORTHO05D006583 1.0e-29 134.0 106 59.4
FAN01G2697 Fragaria x ananassa HOM05D005234 ORTHO05D006583 1.0e-29 134.0 106 59.4
PGR044G0090 Punica granatum HOM05D005234 ORTHO05D006583 1.0e-29 134.0 110 58.2
RcHm_v2.0_Chr1g0364981 Rosa chinensis HOM05D005234 ORTHO05D006583 1.0e-29 134.0 106 60.4
Cc02_g08680 Coffea canephora HOM05D005234 ORTHO05D006583 1.3e-29 133.7 110 57.3
Oeu025610.1 Olea europaea HOM05D005234 ORTHO05D006583 1.8e-29 133.3 109 56.9
HPP92_021203 Vanilla planifolia HOM05D005234 ORTHO05D006583 3.9e-29 132.1 106 58.5
Phvul.007G007800 Phaseolus vulgaris HOM05D005234 ORTHO05D006583 8.7e-29 131.0 133 50.4
AL5G36200 Arabidopsis lyrata HOM05D005234 ORTHO05D006583 1.1e-28 130.6 108 53.7
Atru.chr12.595 Acer truncatum HOM05D005234 ORTHO05D006583 3.3e-28 129.0 96 63.5
THA.LOC104809996 Tarenaya hassleriana HOM05D005234 ORTHO05D006583 3.3e-28 129.0 106 56.6
MD01G1116500 Malus domestica HOM05D005234 ORTHO05D006583 4.3e-28 128.6 106 58.5
CsaV3_5G026250 Cucumis sativus L. HOM05D005234 ORTHO05D006583 5.7e-28 128.3 154 44.8
Migut.A00396 Erythranthe guttata HOM05D005234 ORTHO05D006583 1.3e-27 127.1 106 56.6
MELO3C025470.2 Cucumis melo HOM05D005234 ORTHO05D006583 6.2e-27 124.8 160 45.6
Medtr1g115980 Medicago truncatula HOM05D005234 ORTHO05D006583 6.2e-27 124.8 106 56.6
Sp5g07340 Schrenkiella parvula HOM05D005234 ORTHO05D006583 8.2e-27 124.4 106 52.8
AT3G55080 Arabidopsis thaliana HOM05D005234 ORTHO05D006583 1.4e-26 123.6 108 52.8
Sed0019162 Sechium edule HOM05D005234 ORTHO05D006583 1.8e-26 123.2 113 54.9
Thhalv10010346m.g Eutrema salsugineum HOM05D005234 ORTHO05D006583 2.4e-26 122.9 106 51.9
BcaB01g00128 Brassica carinata HOM05D005234 ORTHO05D006583 3.1e-26 122.5 106 50.9
Carub.0005s2171 Capsella rubella HOM05D005234 ORTHO05D006583 3.1e-26 122.5 108 53.7
SalBow4G2780 Salvia bowleyana HOM05D005234 ORTHO05D006583 5.3e-26 121.7 106 55.7
FAN06G4140 Fragaria x ananassa HOM05D005234 ORTHO05D006583 6.9e-26 121.3 106 56.6
Nitab4.5_0000271g0220 Nicotiana tabacum HOM05D005234 ORTHO05D006583 9.0e-26 120.9 111 51.4
FAN06G4823 Fragaria x ananassa HOM05D005234 ORTHO05D006583 4.5e-25 118.6 106 55.7
AUR62025541 Chenopodium quinoa HOM05D005234 ORTHO05D006583 1.7e-24 116.7 133 48.1
unitig_26.g8857 Utricularia gibba HOM05D005234 ORTHO05D006583 2.9e-24 115.9 106 50.0
TPR.G10401 Trifolium pratense HOM05D005234 ORTHO05D006583 3.8e-24 115.5 105 55.2
BraA09t38797Z Brassica rapa HOM05D005234 ORTHO05D006583 5.0e-24 115.2 107 50.5
SGA_v2.0_scaffold193G40685 Striga asiatica HOM05D005234 ORTHO05D006583 5.0e-24 115.2 105 52.4
Peaxi162Scf00629g00122 Petunia axillaris HOM05D005234 ORTHO05D006583 1.1e-23 114.0 107 51.4
Solyc06g036700.3 Solanum lycopersicum HOM05D005234 ORTHO05D006583 1.4e-23 113.6 106 50.9
Sopen06g012760 Solanum pennellii HOM05D005234 ORTHO05D006583 1.4e-23 113.6 106 50.9
BraA09t40265Z Brassica rapa HOM05D005234 ORTHO05D006583 2.5e-23 112.8 107 49.5
Os01g0976450 Oryza sativa ssp. japonica HOM05D005234 ORTHO05D006583 4.2e-23 112.1 106 53.8
A09p32550 Brassica napus HOM05D005234 ORTHO05D006583 1.2e-22 110.5 107 48.6
BcaC07g39833 Brassica carinata HOM05D005234 ORTHO05D006583 1.6e-22 110.2 107 49.5
A09p48110 Brassica napus HOM05D005234 ORTHO05D006583 1.6e-22 110.2 107 49.5
C08p30350 Brassica napus HOM05D005234 ORTHO05D006583 1.6e-22 110.2 107 49.5
BolC8t50657H Brassica oleracea HOM05D005234 ORTHO05D006583 4.6e-22 108.6 107 48.6
Cpa.g.sc1.299 Carica papaya HOM05D005234 ORTHO05D006583 1.0e-21 107.5 80 60.0
BcaC07g39828 Brassica carinata HOM05D005234 ORTHO05D006583 1.8e-21 106.7 108 45.4
BolC8t50648H Brassica oleracea HOM05D005234 ORTHO05D006583 1.8e-21 106.7 108 45.4
SEGI_20375 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 1.8e-21 106.7 104 48.1
Aa31LG10G10060 Aethionema arabicum HOM05D005234 ORTHO05D006583 8.7e-21 104.4 109 46.8
arahy.Tifrunner.gnm1.ann1.E1ZVHS Arachis hypogaea HOM05D005234 ORTHO05D006583 9.7e-20 100.9 89 57.3
arahy.Tifrunner.gnm1.ann1.IBY72V Arachis hypogaea HOM05D005234 ORTHO05D006583 2.8e-19 99.4 87 56.3
Hma1.2p1_0348F.1_g131700 Hydrangea macrophylla HOM05D005234 ORTHO05D006583 1.5e-17 93.6 66 60.6
Pp3c3_27330 Physcomitrium patens HOM05D005234 ORTHO05D006583 2.6e-17 92.8 106 41.5
Mapoly0068s0008 Marchantia polymorpha HOM05D005234 ORTHO05D006583 4.5e-17 92.0 106 42.5
CANSAT56G3438 Cannabis sativa HOM05D005234 ORTHO05D006583 1.9e-15 86.7 106 46.2
MD01G1116400 Malus domestica HOM05D005234 ORTHO05D006583 1.2e-14 84.0 72 55.6
SMO367G1161 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 2.3e-13 79.7 111 37.8
BolC8t50645H Brassica oleracea HOM05D005234 ORTHO05D006583 3.9e-13 79.0 80 42.5
BolC8t50642H Brassica oleracea HOM05D005234 ORTHO05D006583 1.5e-12 77.0 79 41.8
Psat6g238640 Pisum sativum HOM05D005234 ORTHO05D006583 1.5e-12 77.0 65 50.8
SMO180G0001 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 1.5e-12 77.0 105 39.0
SMO340G0223 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 1.5e-12 77.0 105 39.0
Nitab4.5_0006265g0070 Nicotiana tabacum HOM05D005234 ORTHO05D006583 4.3e-12 75.5 94 46.8
SMO367G0389 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 4.3e-12 75.5 105 37.1
Ca_11325_v3 Cicer arietinum L. HOM05D005234 ORTHO05D006583 1.3e-11 73.9 58 55.2
Pp3c19_10210 Physcomitrium patens HOM05D005234 ORTHO05D006583 1.4e-10 70.5 104 35.6
SMO141G0013 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 5.3e-10 68.6 80 41.2
SMO348G0083 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 6.9e-10 68.2 85 38.8
SMO367G0191 Selaginella moellendorffii HOM05D005234 ORTHO05D006583 9.1e-10 67.8 84 39.3
Mapoly0050s0063 Marchantia polymorpha HOM05D034728 ORTHO05D006583 1.2e-06 57.4 93 35.5


User provided reference genes

Program Settings