Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G03095 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 1.1e-212 743.0 368 100.0
Aqoxy5G00914 Aquilegia oxysepala HOM05D004929 ORTHO05D006492 1.9e-172 609.4 350 84.0
PSO384G0906 Papaver somniferum HOM05D004929 ORTHO05D006492 1.3e-165 586.6 345 80.9
PSO699G0033 Papaver somniferum HOM05D004929 ORTHO05D006492 1.1e-164 583.6 345 80.3
TAR633G2310 Trochodendron aralioides HOM05D004929 ORTHO05D006492 4.1e-164 581.6 356 78.7
Nn8g40033 Nelumbo nucifera HOM05D004929 ORTHO05D006492 1.2e-163 580.1 347 79.5
Manes.15G151900 Manihot esculenta HOM05D004929 ORTHO05D006492 1.1e-161 573.5 352 77.6
Sabra16G0222700 Salix brachista HOM05D004929 ORTHO05D006492 4.3e-161 571.6 347 76.9
Potri.001G343400 Populus trichocarpa HOM05D004929 ORTHO05D006492 7.3e-161 570.9 349 77.1
Prupe.3G293800 Prunus persica HOM05D004929 ORTHO05D006492 2.1e-160 569.3 352 77.6
Actinidia05982 Actinidia chinensis HOM05D004929 ORTHO05D006492 8.1e-160 567.4 352 75.0
Duzib147G0164 Durio zibethinus HOM05D004929 ORTHO05D006492 1.8e-159 566.2 350 76.6
Nitab4.5_0001860g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 5.2e-159 564.7 351 75.2
Cc09_g04510 Coffea canephora HOM05D004929 ORTHO05D006492 8.9e-159 563.9 354 75.1
Thecc.04G019500 Theobroma cacao HOM05D004929 ORTHO05D006492 8.9e-159 563.9 348 76.4
Rhsim10G0014700 Rhododendron simsii HOM05D004929 ORTHO05D006492 3.4e-158 562.0 350 76.3
QL02p074005 Quercus lobata HOM05D004929 ORTHO05D006492 4.4e-158 561.6 354 75.4
Ciclev10015593m.g Citrus clementina HOM05D004929 ORTHO05D006492 5.8e-158 561.2 348 75.6
Peaxi162Scf00080g01316 Petunia axillaris HOM05D004929 ORTHO05D005557 5.8e-158 561.2 350 75.7
Peaxi162Scf03028g00012 Petunia axillaris HOM05D004929 ORTHO05D006492 5.8e-158 561.2 343 77.3
Dinv25726 Davidia involucrata HOM05D004929 ORTHO05D006492 7.6e-158 560.8 351 75.8
Gorai.006G034800 Gossypium raimondii HOM05D004929 ORTHO05D006492 2.2e-157 559.3 350 75.7
Peaxi162Scf00129g01650 Petunia axillaris HOM05D004929 ORTHO05D006492 2.2e-157 559.3 343 77.0
MD09G1023000 Malus domestica HOM05D004929 ORTHO05D006492 8.4e-157 557.4 362 73.2
GSVIVG01032385001 Vitis vinifera HOM05D004929 ORTHO05D006492 1.1e-156 557.0 353 75.4
CiPaw.03G045500 Carya illinoinensis HOM05D004929 ORTHO05D006492 2.4e-156 555.8 342 77.2
CAN.G473.20 Capsicum annuum HOM05D004929 ORTHO05D006492 4.1e-156 555.1 352 74.7
Gohir.D09G029800 Gossypium hirsutum HOM05D004929 ORTHO05D006492 4.1e-156 555.1 350 75.1
vmacro05876 Vaccinium macrocarpon HOM05D004929 ORTHO05D006492 7.1e-156 554.3 357 72.8
Lju41A43T26 Lonicera japonica HOM05D004929 ORTHO05D006492 1.6e-155 553.1 353 73.9
PGR142G3088 Punica granatum HOM05D004929 ORTHO05D006492 2.1e-155 552.7 354 74.3
CiPaw.04G029600 Carya illinoinensis HOM05D004929 ORTHO05D006492 2.7e-155 552.4 339 77.3
Cfa007339 Carpinus fangiana HOM05D004929 ORTHO05D006492 3.5e-155 552.0 336 77.1
Gohir.A09G030100 Gossypium hirsutum HOM05D004929 ORTHO05D006492 3.5e-155 552.0 350 74.3
Haze_14758 Corylus avellana HOM05D004929 ORTHO05D006492 7.8e-155 550.8 350 75.4
PGSC0003DMG400012608 Solanum tuberosum HOM05D004929 ORTHO05D006492 1.3e-154 550.1 345 75.4
Solyc02g093440.4 Solanum lycopersicum HOM05D004929 ORTHO05D006492 1.7e-154 549.7 343 75.5
Hund23289 Selenicereus undatus HOM05D004929 ORTHO05D006492 3.0e-154 548.9 353 73.7
ClCG09G019380 Citrullus lanatus HOM05D004929 ORTHO05D006492 6.6e-154 547.7 358 71.8
MELO3C021592.2 Cucumis melo HOM05D004929 ORTHO05D006492 6.6e-154 547.7 354 72.3
MBI05_g22077_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 8.7e-154 547.4 347 77.2
AL3G10510 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 1.5e-153 546.6 342 75.1
TWI12G0632 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 2.5e-153 545.8 350 73.7
Sopen02g038230 Solanum pennellii HOM05D004929 ORTHO05D006492 4.3e-153 545.0 343 74.9
FvH4_6g51800 Fragaria vesca HOM05D004929 ORTHO05D006492 7.3e-153 544.3 361 72.0
MD17G1022300 Malus domestica HOM05D004929 ORTHO05D006492 9.6e-153 543.9 358 73.5
AT3G01640 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 1.6e-152 543.1 347 73.8
arahy.Tifrunner.gnm1.ann1.NF5K9F Arachis hypogaea HOM05D004929 ORTHO05D006492 2.1e-152 542.7 351 73.8
FAN09G2944 Fragaria x ananassa HOM05D004929 ORTHO05D006492 2.1e-152 542.7 361 72.0
arahy.Tifrunner.gnm1.ann1.FEY4ZS Arachis hypogaea HOM05D004929 ORTHO05D006492 3.6e-152 542.0 351 73.8
CARHR075280 Cardamine hirsuta HOM05D004929 ORTHO05D006492 3.6e-152 542.0 352 73.0
CsaV3_5G027030 Cucumis sativus L. HOM05D004929 ORTHO05D006492 3.6e-152 542.0 355 71.0
Aa31LG5G10780 Aethionema arabicum HOM05D004929 ORTHO05D006492 4.7e-152 541.6 351 73.8
FAN14G2766 Fragaria x ananassa HOM05D004929 ORTHO05D006492 4.7e-152 541.6 361 71.7
THA.LOC104821096 Tarenaya hassleriana HOM05D004929 ORTHO05D006492 1.1e-151 540.4 347 73.2
SalBow7G3047 Salvia bowleyana HOM05D004929 ORTHO05D006492 1.8e-151 539.7 354 71.5
RcHm_v2.0_Chr2g0173281 Rosa chinensis HOM05D004929 ORTHO05D006492 3.1e-151 538.9 361 72.0
CANSAT64G1903 Cannabis sativa HOM05D004929 ORTHO05D006492 4.0e-151 538.5 342 74.0
Thhalv10020980m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 4.0e-151 538.5 358 71.2
Carub.0003s0042 Capsella rubella HOM05D004929 ORTHO05D006492 5.2e-151 538.1 345 74.2
Sed0020215 Sechium edule HOM05D004929 ORTHO05D006492 5.2e-151 538.1 354 71.5
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 2.0e-150 536.2 347 72.0
Sed0027438 Sechium edule HOM05D004929 ORTHO05D006492 4.4e-150 535.0 351 71.2
TWI56G0780 Tripterygium wilfordii HOM05D004929 ORTHO05D006492 4.4e-150 535.0 351 71.8
EL10Ac6g14097 Beta vulgaris HOM05D004929 ORTHO05D006492 5.8e-150 534.6 344 72.4
C03p39500 Brassica napus HOM05D004929 ORTHO05D006492 7.6e-150 534.3 342 72.8
BcaC01g04530 Brassica carinata HOM05D004929 ORTHO05D006492 9.9e-150 533.9 342 72.5
Sp3g00410 Schrenkiella parvula HOM05D004929 ORTHO05D006492 9.9e-150 533.9 353 71.7
BraA03t12414Z Brassica rapa HOM05D004929 ORTHO05D006492 1.7e-149 533.1 342 72.8
Migut.K01411 Erythranthe guttata HOM05D004929 ORTHO05D006492 1.7e-149 533.1 348 72.1
FAN05G4087 Fragaria x ananassa HOM05D004929 ORTHO05D006492 1.7e-149 533.1 361 70.6
ATR0827G043 Amborella trichopoda HOM05D004929 ORTHO05D006492 2.9e-149 532.3 372 70.7
HPP92_015407 Vanilla planifolia HOM05D004929 ORTHO05D006492 2.9e-149 532.3 346 73.1
FAN02G0047 Fragaria x ananassa HOM05D004929 ORTHO05D006492 3.8e-149 531.9 373 69.2
BolC3t16218H Brassica oleracea HOM05D004929 ORTHO05D006492 4.9e-149 531.6 342 72.5
HanXRQChr17g0548651 Helianthus annuus HOM05D004929 ORTHO05D006492 8.4e-149 530.8 338 74.0
MSTRG.3138 Avicennia marina HOM05D004929 ORTHO05D006492 1.1e-148 530.4 349 71.9
Glyma.05G002500 Glycine max HOM05D004929 ORTHO05D006492 1.1e-148 530.4 351 70.4
A03p32440 Brassica napus HOM05D004929 ORTHO05D006492 1.9e-148 529.6 342 72.5
BraA10t44472Z Brassica rapa HOM05D004929 ORTHO05D006492 3.2e-148 528.9 351 71.2
Medtr6g004430 Medicago truncatula HOM05D004929 ORTHO05D006492 1.2e-147 526.9 347 72.6
TPR.G31950 Trifolium pratense HOM05D004929 ORTHO05D006492 1.6e-147 526.6 353 71.7
Lsat_1_v5_gn_0_18301 Lactuca sativa HOM05D004929 ORTHO05D006492 2.7e-147 525.8 351 68.9
Phvul.004G004700 Phaseolus vulgaris HOM05D004929 ORTHO05D006492 2.7e-147 525.8 349 71.3
VMungo0464G1388 Vigna mungo HOM05D004929 ORTHO05D006492 6.0e-147 524.6 348 72.4
CARHR198840 Cardamine hirsuta HOM05D004929 ORTHO05D006492 7.8e-147 524.2 360 68.6
AL6G25200 Arabidopsis lyrata HOM05D004929 ORTHO05D006492 1.0e-146 523.9 349 71.1
AT5G14470 Arabidopsis thaliana HOM05D004929 ORTHO05D006492 2.3e-146 522.7 352 70.7
Thhalv10013912m.g Eutrema salsugineum HOM05D004929 ORTHO05D006492 2.3e-146 522.7 349 69.3
HanXRQChr17g0548641 Helianthus annuus HOM05D004929 ORTHO05D006492 3.0e-146 522.3 347 70.9
Carub.0006s1265 Capsella rubella HOM05D004929 ORTHO05D006492 5.1e-146 521.5 349 70.5
DCAR_021732 Daucus carota HOM05D004929 ORTHO05D006492 1.1e-145 520.4 340 72.6
Duzib264G0638 Durio zibethinus HOM05D004929 ORTHO05D006492 1.9e-145 519.6 382 67.3
Lalb_Chr06g0176621 Lupinus albus HOM05D004929 ORTHO05D006492 3.3e-145 518.8 348 69.5
ECA246G1179 Erigeron canadensis HOM05D004929 ORTHO05D006492 9.6e-145 517.3 349 70.8
Ah.03g137000 Amaranthus hybridus HOM05D004929 ORTHO05D006492 2.8e-144 515.8 352 69.3
AUR62008872 Chenopodium quinoa HOM05D004929 ORTHO05D006492 2.8e-144 515.8 349 70.8
Ca_04143_v3 Cicer arietinum L. HOM05D004929 ORTHO05D006492 1.4e-143 513.5 346 71.7
Zm00001eb025800 Zea mays HOM05D004929 ORTHO05D006492 9.0e-143 510.8 350 70.3
Os11g0217300 Oryza sativa ssp. japonica HOM05D004929 ORTHO05D006492 2.0e-142 509.6 338 72.2
Lj2g0024676 Lotus japonicus HOM05D004929 ORTHO05D006492 2.6e-142 509.2 347 69.7
arahy.Tifrunner.gnm1.ann1.BJ3QP1 Arachis hypogaea HOM05D004929 ORTHO05D006492 3.8e-141 505.4 322 76.1
AUR62031837 Chenopodium quinoa HOM05D004929 ORTHO05D006492 6.4e-141 504.6 389 64.0
BcaB08g36997 Brassica carinata HOM05D004929 ORTHO05D006492 1.4e-140 503.4 349 68.5
BcaC04g19032 Brassica carinata HOM05D004929 ORTHO05D006492 9.6e-137 490.7 361 66.8
SHI00354 Sapria himalayana HOM05D004929 ORTHO05D006492 3.1e-135 485.7 337 69.1
BcaB08g36995 Brassica carinata HOM05D004929 ORTHO05D006492 4.5e-134 481.9 367 65.4
Oeu018151.1 Olea europaea HOM05D004929 ORTHO05D006492 2.9e-133 479.2 348 66.7
COL.COLO4_29172 Corchorus olitorius HOM05D004929 ORTHO05D006492 2.1e-128 463.0 354 64.1
SMO145G0043 Selaginella moellendorffii HOM05D004929 ORTHO05D006492 5.3e-127 458.4 333 64.3
SGA_v2.0_scaffold30G12409 Striga asiatica HOM05D004929 ORTHO05D006492 2.7e-123 446.0 275 76.7
Eucgr.I01731 Eucalyptus grandis HOM05D004929 ORTHO05D006492 4.6e-123 445.3 280 75.4
A10p24090 Brassica napus HOM05D004929 ORTHO05D006492 3.3e-121 439.1 353 60.6
Dinv33427 Davidia involucrata HOM05D004929 ORTHO05D006492 1.6e-120 436.8 280 74.3
Sc03g0007290 Simmondsia chinensis HOM05D004929 ORTHO05D006492 2.8e-120 436.0 271 74.5
Nitab4.5_0006683g0060 Nicotiana tabacum HOM05D004929 ORTHO05D006492 6.9e-119 431.4 351 61.5
unitig_0.g1597 Utricularia gibba HOM05D004929 ORTHO05D006492 6.1e-115 418.3 275 72.0
HPP92_026990 Vanilla planifolia HOM05D004929 ORTHO05D006492 1.9e-113 413.3 264 75.4
Psat1g053480 Pisum sativum HOM05D004929 ORTHO05D006492 2.6e-110 402.9 268 71.3
AagrBONN_evm.TU.Sc2ySwM_228.449 Anthoceros agrestis HOM05D000718 ORTHO05D002712 3.4e-110 402.5 291 65.6
Mapoly0023s0058 Marchantia polymorpha HOM05D004929 ORTHO05D006492 2.2e-109 399.8 351 58.1
ATR0681G379 Amborella trichopoda HOM05D004929 ORTHO05D006492 1.2e-107 394.0 254 74.8
CBR_g3618 Chara braunii HOM05D004929 ORTHO05D006492 1.0e-106 391.0 349 56.4
SGA_v2.0_scaffold47G17516 Striga asiatica HOM05D004929 ORTHO05D006492 4.5e-102 375.6 333 58.0
Atru.chr6.2430 Acer truncatum HOM05D004929 ORTHO05D006492 2.2e-101 373.2 231 75.8
Pp3c22_9380 Physcomitrium patens HOM05D004929 ORTHO05D006492 4.4e-97 359.0 267 62.2
SHI25478 Sapria himalayana HOM05D004929 ORTHO05D006492 1.3e-96 357.5 279 64.2
BolC9t59108H Brassica oleracea HOM05D004929 ORTHO05D006492 8.0e-91 338.2 369 49.9
C09p62710 Brassica napus HOM05D004929 ORTHO05D006492 4.0e-90 335.9 360 49.7
CDE07G0337 Ceratophyllum demersum HOM05D004929 ORTHO05D006492 3.3e-89 332.8 209 75.1
Cre02.g107600 Chlamydomonas reinhardtii HOM05D004929 ORTHO05D006492 1.2e-86 324.3 356 49.7
Nitab4.5_0000040g0670 Nicotiana tabacum HOM05D004929 ORTHO05D006492 1.2e-83 314.3 348 50.0
PRCOL_00005101 Prasinoderma coloniale HOM05D004929 ORTHO05D006492 1.3e-80 304.3 343 49.6
MCO09G795 Micromonas commoda HOM05D004929 ORTHO05D006492 2.8e-80 303.1 353 47.3
Nitab4.5_0001550g0030 Nicotiana tabacum HOM05D004929 ORTHO05D006492 4.9e-72 275.8 230 61.7
MBI05_g01825_MAGBIO Magnolia biondii HOM05D004929 ORTHO05D006492 1.9e-68 263.8 215 64.2
Oeu033729.3 Olea europaea HOM05D004929 ORTHO05D006492 2.5e-68 263.5 209 65.6
BcaB08g36982 Brassica carinata HOM05D004929 ORTHO05D006492 6.8e-58 228.8 161 66.5
Atru.chr6.2429 Acer truncatum HOM05D004929 ORTHO05D006492 8.1e-51 205.3 115 83.5
BolC9t59344H Brassica oleracea HOM05D004929 ORTHO05D006492 5.8e-49 199.1 182 56.0
MSTRG.3285 Avicennia marina HOM05D004929 ORTHO05D006492 1.3e-48 198.0 131 71.0
CDE07G1161 Ceratophyllum demersum HOM05D004929 ORTHO05D043891 2.0e-33 147.5 114 61.4
MD17G1022500 Malus domestica HOM05D004929 ORTHO05D006492 9.3e-23 112.1 73 71.2
A10p26090 Brassica napus HOM05D004929 ORTHO05D006492 1.2e-22 111.7 188 37.8
BcaNung06761 Brassica carinata HOM05D004929 ORTHO05D006492 1.0e-21 108.6 70 71.4
Sopen02g038030 Solanum pennellii HOM05D004929 ORTHO05D006492 1.0e-21 108.6 68 70.6
Sp6g29550 Schrenkiella parvula HOM05D004929 ORTHO05D043891 2.7e-14 84.0 65 58.5
arahy.Tifrunner.gnm1.ann1.6CI6DX Arachis hypogaea HOM05D004929 ORTHO05D031499 1.4e-10 71.6 44 70.5
arahy.Tifrunner.gnm1.ann1.XQCE19 Arachis hypogaea HOM05D004929 ORTHO05D031499 3.4e-09 67.0 43 65.1
CAN.G1057.11 Capsicum annuum HOM05D004929 ORTHO05D115892 1.4e-07 61.6 46 56.5
Glyma.19G002700 Glycine max HOM05D004929 ORTHO05D215243 4.6e-06 56.6 53 52.8


User provided reference genes

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