Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02849 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 0.0e+00 1724.9 869 100.0
Aqoxy6G00028 Aquilegia oxysepala HOM05D003469 ORTHO05D004084 3.0e-282 975.3 858 60.3
TAR628G0771 Trochodendron aralioides HOM05D003469 ORTHO05D004084 6.1e-267 924.5 855 57.8
PSO170G4646 Papaver somniferum HOM05D003469 ORTHO05D004084 2.3e-266 922.5 859 58.2
Nn5g27173 Nelumbo nucifera HOM05D003469 ORTHO05D004084 2.9e-240 835.9 855 53.9
MBI03_g18641_MAGBIO Magnolia biondii HOM05D003469 ORTHO05D004084 6.4e-240 834.7 854 52.9
GSVIVG01036699001 Vitis vinifera HOM05D003469 ORTHO05D004084 2.1e-235 819.7 899 50.5
CiPaw.03G010300 Carya illinoinensis HOM05D003469 ORTHO05D004084 4.0e-234 815.5 854 53.2
Sopen06g022880 Solanum pennellii HOM05D003469 ORTHO05D004084 1.0e-229 800.8 860 50.8
Solyc06g063420.4 Solanum lycopersicum HOM05D003469 ORTHO05D004084 1.7e-229 800.0 860 50.6
Dinv28114 Davidia involucrata HOM05D003469 ORTHO05D004084 3.6e-227 792.3 858 50.8
Glyma.11G102000 Glycine max HOM05D003469 ORTHO05D004084 9.0e-226 787.7 852 51.6
Phvul.011G031000 Phaseolus vulgaris HOM05D003469 ORTHO05D004084 2.0e-225 786.6 854 51.2
Actinidia21939 Actinidia chinensis HOM05D003469 ORTHO05D004084 8.4e-224 781.2 880 49.3
Thecc.08G168800 Theobroma cacao HOM05D003469 ORTHO05D004084 1.1e-223 780.8 859 50.2
ClCG07G013810 Citrullus lanatus HOM05D003469 ORTHO05D004084 5.4e-223 778.5 852 50.4
Glyma.12G027700 Glycine max HOM05D003469 ORTHO05D004084 2.7e-222 776.2 852 50.9
TWI38G1177 Tripterygium wilfordii HOM05D003469 ORTHO05D004084 1.1e-220 770.8 869 49.0
ECA232G2309 Erigeron canadensis HOM05D003469 ORTHO05D004084 1.5e-220 770.4 865 48.8
CsaV3_3G043790 Cucumis sativus L. HOM05D003469 ORTHO05D004084 8.1e-219 764.6 852 49.3
MELO3C013095.2 Cucumis melo HOM05D003469 ORTHO05D004084 1.4e-218 763.8 852 49.2
Lj1g0005967 Lotus japonicus HOM05D003469 ORTHO05D004084 1.4e-218 763.8 836 51.1
MSTRG.1003 Avicennia marina HOM05D003469 ORTHO05D004084 9.0e-218 761.1 856 49.1
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 1.5e-217 760.4 763 53.3
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea HOM05D003469 ORTHO05D004084 2.9e-216 756.1 887 48.3
HanXRQChr09g0266911 Helianthus annuus HOM05D003469 ORTHO05D004084 2.7e-214 749.6 851 47.5
Eucgr.G01221 Eucalyptus grandis HOM05D003469 ORTHO05D004084 3.5e-214 749.2 860 47.9
Cc00_g11470 Coffea canephora HOM05D003469 ORTHO05D004084 1.0e-213 747.7 854 48.2
Lj9C162G1 Lonicera japonica HOM05D003469 ORTHO05D004084 2.3e-213 746.5 890 47.8
Lj9C173G0 Lonicera japonica HOM05D003469 ORTHO05D004084 2.3e-213 746.5 850 49.3
Sc09g0010840 Simmondsia chinensis HOM05D003469 ORTHO05D004084 1.5e-212 743.8 857 48.3
FAN14G5376 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.3e-211 740.7 852 49.1
Sed0013857 Sechium edule HOM05D003469 ORTHO05D004084 2.1e-211 740.0 854 48.6
FvH4_6g37900 Fragaria vesca HOM05D003469 ORTHO05D004084 4.8e-211 738.8 852 48.9
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea HOM05D003469 ORTHO05D004084 4.0e-210 735.7 880 47.5
Migut.C00329 Erythranthe guttata HOM05D003469 ORTHO05D004084 5.3e-210 735.3 856 47.4
RcHm_v2.0_Chr2g0151101 Rosa chinensis HOM05D003469 ORTHO05D004084 2.0e-209 733.4 844 49.1
EL10Ac5g10861 Beta vulgaris HOM05D003469 ORTHO05D004084 5.8e-209 731.9 881 47.4
AUR62008300 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.9e-208 729.6 855 47.5
Lalb_Chr07g0195581 Lupinus albus HOM05D003469 ORTHO05D004084 2.9e-208 729.6 866 48.6
Peaxi162Scf00818g00323 Petunia axillaris HOM05D003469 ORTHO05D004084 2.9e-208 729.6 833 47.8
Gorai.008G247300 Gossypium raimondii HOM05D003469 ORTHO05D004084 3.8e-208 729.2 853 48.2
VMungo1127G1455 Vigna mungo HOM05D003469 ORTHO05D004084 1.4e-207 727.2 880 47.5
FAN02G0848 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.9e-207 726.9 852 48.2
CAN.G14.42 Capsicum annuum HOM05D003469 ORTHO05D004084 5.5e-207 725.3 860 47.6
FAN09G4617 Fragaria x ananassa HOM05D003469 ORTHO05D004084 4.6e-206 722.2 852 48.0
Nitab4.5_0003757g0100 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.3e-205 720.7 870 47.1
CSS0010807 Camellia sinensis var. sinensis HOM05D003469 ORTHO05D004084 3.9e-205 719.2 857 47.8
CANSAT78G0348 Cannabis sativa HOM05D003469 ORTHO05D004084 3.9e-205 719.2 858 47.9
Gohir.D12G231100 Gossypium hirsutum HOM05D003469 ORTHO05D004084 3.9e-205 719.2 851 47.5
TPR.G38733 Trifolium pratense HOM05D003469 ORTHO05D004084 3.7e-203 712.6 857 47.4
Gohir.A12G230000 Gossypium hirsutum HOM05D003469 ORTHO05D004084 4.8e-203 712.2 849 47.2
Hund09398 Selenicereus undatus HOM05D003469 ORTHO05D004084 1.4e-202 710.7 844 47.0
Prupe.8G070000 Prunus persica HOM05D003469 ORTHO05D004084 4.5e-201 705.7 850 47.6
RcHm_v2.0_Chr2g0151071 Rosa chinensis HOM05D003469 ORTHO05D004084 2.9e-200 703.0 852 47.8
Duzib235G0325 Durio zibethinus HOM05D003469 ORTHO05D004084 1.2e-198 697.6 850 47.8
Medtr4g079390 Medicago truncatula HOM05D003469 ORTHO05D004084 1.4e-197 694.1 870 46.8
HPP92_015320 Vanilla planifolia HOM05D003469 ORTHO05D004084 8.8e-197 691.4 849 45.9
MD09G1155000 Malus domestica HOM05D003469 ORTHO05D004084 1.1e-196 691.0 855 46.5
Os11g0266800 Oryza sativa ssp. japonica HOM05D003469 ORTHO05D004084 1.1e-196 691.0 854 44.0
AUR62031062 Chenopodium quinoa HOM05D003469 ORTHO05D004084 1.5e-196 690.6 853 46.3
SalBow7G2370 Salvia bowleyana HOM05D003469 ORTHO05D004084 6.9e-194 681.8 886 44.0
Atru.chr9.1130 Acer truncatum HOM05D003469 ORTHO05D004084 2.6e-193 679.9 864 46.1
Nitab4.5_0005224g0040 Nicotiana tabacum HOM05D003469 ORTHO05D004084 1.0e-192 677.9 851 45.1
Medtr4g074860 Medicago truncatula HOM05D003469 ORTHO05D004084 6.5e-192 675.2 900 45.1
Nitab4.5_0002906g0070 Nicotiana tabacum HOM05D003469 ORTHO05D004084 5.5e-191 672.2 845 45.3
Lsat_1_v5_gn_4_131841 Lactuca sativa HOM05D003469 ORTHO05D004084 5.1e-189 665.6 853 44.2
QL09p054764 Quercus lobata HOM05D003469 ORTHO05D004084 1.1e-188 664.5 775 48.6
SMO164G0159 Selaginella moellendorffii HOM05D003469 ORTHO05D004084 5.7e-188 662.1 881 43.0
DCAR_001477 Daucus carota HOM05D003469 ORTHO05D004084 9.7e-188 661.4 884 45.1
Manes.06G016500 Manihot esculenta HOM05D003469 ORTHO05D004084 1.4e-186 657.5 833 46.2
unitig_26.g9845 Utricularia gibba HOM05D003469 ORTHO05D004084 1.3e-184 651.0 875 43.9
RcHm_v2.0_Chr6g0293861 Rosa chinensis HOM05D003469 ORTHO05D004084 4.7e-182 642.5 868 43.8
SGA_v2.0_scaffold8G04312 Striga asiatica HOM05D003469 ORTHO05D004084 1.8e-181 640.6 931 40.9
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 9.7e-180 634.8 864 43.8
FAN15G0576 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.2e-176 623.6 864 43.5
Dinv15687 Davidia involucrata HOM05D003469 ORTHO05D004084 1.9e-175 620.5 850 44.0
Potri.013G128900 Populus trichocarpa HOM05D003469 ORTHO05D004084 2.5e-175 620.2 858 43.7
FAN27G0386 Fragaria x ananassa HOM05D003469 ORTHO05D004084 1.5e-172 610.9 857 43.1
Peaxi162Scf00015g00107 Petunia axillaris HOM05D003469 ORTHO05D004084 4.4e-172 609.4 854 42.3
Lj9A422T76 Lonicera japonica HOM05D003469 ORTHO05D004084 1.3e-171 607.8 756 46.4
TPR.G32330 Trifolium pratense HOM05D003469 ORTHO05D004084 2.2e-168 597.0 863 42.9
Zm00001eb171180 Zea mays HOM05D003469 ORTHO05D004084 6.1e-166 589.0 712 45.4
AL1G30030 Arabidopsis lyrata HOM05D003469 ORTHO05D004084 5.2e-165 585.9 845 41.1
Mapoly0024s0108 Marchantia polymorpha HOM05D003469 ORTHO05D004084 1.2e-164 584.7 830 39.5
A06p13570 Brassica napus HOM05D003469 ORTHO05D004084 7.5e-164 582.0 852 40.7
BraA06t24509Z Brassica rapa HOM05D003469 ORTHO05D004084 7.5e-164 582.0 852 40.7
AT1G17680 Arabidopsis thaliana HOM05D003469 ORTHO05D004084 2.2e-163 580.5 847 41.6
Carub.0001s1741 Capsella rubella HOM05D003469 ORTHO05D004084 1.4e-162 577.8 844 41.0
C05p16090 Brassica napus HOM05D003469 ORTHO05D004084 7.0e-162 575.5 852 40.3
BcaC05g25689 Brassica carinata HOM05D003469 ORTHO05D004084 9.1e-162 575.1 852 40.3
BolC5t30309H Brassica oleracea HOM05D003469 ORTHO05D004084 9.1e-162 575.1 852 40.1
Thhalv10006758m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 7.7e-161 572.0 845 40.9
BolC4t22588H Brassica oleracea HOM05D003469 ORTHO05D004084 1.3e-160 571.2 850 39.5
Nitab4.5_0002354g0130 Nicotiana tabacum HOM05D003469 ORTHO05D004084 5.0e-160 569.3 871 40.5
BcaC02g11929 Brassica carinata HOM05D003469 ORTHO05D004084 6.6e-160 568.9 845 39.5
BcaB07g34024 Brassica carinata HOM05D003469 ORTHO05D004084 3.3e-159 566.6 850 39.9
THA.LOC104807542 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 3.6e-158 563.1 862 39.1
FvH4_2g25610 Fragaria vesca HOM05D003469 ORTHO05D004084 5.2e-157 559.3 864 40.5
AUR62039415 Chenopodium quinoa HOM05D003469 ORTHO05D004084 2.6e-156 557.0 672 47.3
vmacro00914 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 1.1e-154 551.6 1313 32.0
Ciclev10026956m.g Citrus clementina HOM05D003469 ORTHO05D004084 8.0e-150 535.4 860 39.3
C04p09790 Brassica napus HOM05D003469 ORTHO05D004084 6.8e-149 532.3 862 37.6
Aa31LG7G2510 Aethionema arabicum HOM05D003469 ORTHO05D004084 2.9e-147 526.9 849 37.0
Pp3c8_10360 Physcomitrium patens HOM05D003469 ORTHO05D004084 1.4e-146 524.6 895 36.9
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis HOM05D003469 ORTHO05D004084 2.3e-144 517.3 882 37.2
Ciclev10019721m.g Citrus clementina HOM05D003469 ORTHO05D004084 1.8e-141 507.7 516 54.7
CDE05G0531 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 1.9e-138 497.7 464 55.8
ATR1089G047 Amborella trichopoda HOM05D003469 ORTHO05D004084 5.4e-138 496.1 867 37.5
Pp3c8_10366 Physcomitrium patens HOM05D003469 ORTHO05D004084 5.2e-133 479.6 891 35.2
TAR633G1289 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.3e-131 474.9 409 60.9
Ah.15g095790 Amaranthus hybridus HOM05D003469 ORTHO05D004084 8.4e-131 472.2 1356 28.4
Haze_14033 Corylus avellana HOM05D003469 ORTHO05D004084 7.3e-127 459.1 605 45.6
THA.LOC104800339 Tarenaya hassleriana HOM05D003469 ORTHO05D004084 2.0e-124 451.1 632 42.2
Ca_19034_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 3.3e-103 380.6 336 60.4
PGSC0003DMG400033134 Solanum tuberosum HOM05D003469 ORTHO05D004084 1.5e-100 371.7 325 60.6
EL10Ac5g10434 Beta vulgaris HOM05D003469 ORTHO05D004084 2.2e-99 367.9 635 37.2
TAR633G1719 Trochodendron aralioides HOM05D003469 ORTHO05D004084 1.6e-97 361.7 398 49.0
Sp1g15780 Schrenkiella parvula HOM05D003469 ORTHO05D004084 8.2e-94 349.4 427 45.7
C04p00480 Brassica napus HOM05D003469 ORTHO05D004084 9.0e-93 345.9 792 29.9
MD17G1141000 Malus domestica HOM05D003469 ORTHO05D004084 1.5e-84 318.5 414 40.6
MD17G1141100 Malus domestica HOM05D003469 ORTHO05D004084 1.5e-84 318.5 312 56.7
CBR_g36749 Chara braunii HOM05D003469 ORTHO05D004084 3.0e-80 304.3 1101 24.5
FvH4_6g38050 Fragaria vesca HOM05D003469 ORTHO05D004084 3.0e-80 304.3 798 30.7
FvH4_6g38030 Fragaria vesca HOM05D003469 ORTHO05D004084 3.9e-80 303.9 390 43.8
Cpa.g.sc21.245 Carica papaya HOM05D003469 ORTHO05D004084 3.3e-79 300.8 362 45.0
AUR62000094 Chenopodium quinoa HOM05D003469 ORTHO05D004084 8.5e-75 286.2 452 37.4
Oeu019664.1 Olea europaea HOM05D003469 ORTHO05D004084 5.5e-74 283.5 363 44.6
CDE05G3544 Ceratophyllum demersum HOM05D003469 ORTHO05D004084 2.8e-70 271.2 356 43.5
CARHR018280 Cardamine hirsuta HOM05D003469 ORTHO05D004084 4.5e-68 263.8 467 35.1
SHI03012 Sapria himalayana HOM05D003469 ORTHO05D004084 4.5e-68 263.8 270 53.0
HanXRQChr13g0406831 Helianthus annuus HOM05D003469 ORTHO05D004084 4.8e-62 243.8 189 58.2
COL.COLO4_25121 Corchorus olitorius HOM05D003469 ORTHO05D004084 2.9e-59 234.6 369 37.9
SEGI_08666 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 3.2e-58 231.1 178 62.4
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 1.0e-56 226.1 593 30.5
FAN20G2279 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.3e-56 224.9 499 31.9
Potri.013G129500 Populus trichocarpa HOM05D003469 ORTHO05D000003 2.6e-55 221.5 396 36.9
Ca_16139_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 5.4e-53 213.8 349 40.1
SHI03015 Sapria himalayana HOM05D003469 ORTHO05D004084 5.5e-50 203.8 252 43.3
vmacro23125 Vaccinium macrocarpon HOM05D003469 ORTHO05D004084 2.0e-44 185.3 422 30.1
Thhalv10002713m.g Eutrema salsugineum HOM05D003469 ORTHO05D004084 1.3e-43 182.6 136 64.7
C04p00500 Brassica napus HOM05D003469 ORTHO05D004084 5.0e-43 180.6 356 31.5
COL.COLO4_25120 Corchorus olitorius HOM05D003469 ORTHO05D004084 9.5e-42 176.4 334 39.5
Medtr4g074690 Medicago truncatula HOM05D003469 ORTHO05D004084 1.2e-41 176.0 281 40.6
Cre10.g464950 Chlamydomonas reinhardtii HOM05D003469 ORTHO05D004084 5.9e-36 157.1 326 31.0
Actinidia02459 Actinidia chinensis HOM05D003469 ORTHO05D004084 4.0e-32 144.4 120 56.7
BcaC02g12574 Brassica carinata HOM05D003469 ORTHO05D004084 1.7e-30 139.0 101 65.3
Ca_16140_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 2.9e-30 138.3 152 50.7
Ciclev10020572m.g Citrus clementina HOM05D003469 ORTHO05D004084 1.1e-29 136.3 315 32.1
ATR0002G001 Amborella trichopoda HOM05D003469 ORTHO05D004084 4.1e-29 134.4 86 70.9
Aa31LG2G17580 Aethionema arabicum HOM05D003469 ORTHO05D004084 3.5e-28 131.3 79 73.4
Haze_14034 Corylus avellana HOM05D003469 ORTHO05D004084 1.3e-27 129.4 133 48.9
SEGI_05114 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 6.6e-27 127.1 143 52.4
Oeu035042.1 Olea europaea HOM05D003469 ORTHO05D004084 8.6e-27 126.7 245 35.1
QL09p054785 Quercus lobata HOM05D003469 ORTHO05D004084 2.5e-26 125.2 150 47.3
ECA232G2749 Erigeron canadensis HOM05D001807 ORTHO05D002044 3.3e-26 124.8 90 63.3
Cpa.g.sc21.244 Carica papaya HOM05D003469 ORTHO05D004084 5.6e-26 124.0 89 69.7
Glyma.07G124800 Glycine max HOM05D003469 ORTHO05D004084 7.3e-26 123.6 157 45.9
SEGI_39938 Sequoiadendron giganteum HOM05D003469 ORTHO05D004084 3.1e-24 118.2 112 51.8
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 4.0e-24 117.9 80 71.2
BcaC02g12573 Brassica carinata HOM05D003469 ORTHO05D004084 7.5e-23 113.6 242 30.6
Ca_16137_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 2.7e-20 105.1 159 41.5
Psat0s3379g0040 Pisum sativum HOM05D003469 ORTHO05D004084 1.3e-19 102.8 122 41.8
Sabra13G0107500 Salix brachista HOM05D000001 ORTHO05D000003 6.6e-19 100.5 164 39.0
SEGI_26656 Sequoiadendron giganteum HOM05D003469 ORTHO05D000001 1.1e-18 99.8 121 42.1
Psat0s3379g0080 Pisum sativum HOM05D003469 ORTHO05D004084 3.6e-17 94.7 176 35.2
Oeu026515.1 Olea europaea HOM05D003469 ORTHO05D004084 1.7e-14 85.9 91 40.7
Lsat_1_v5_gn_0_35341 Lactuca sativa HOM05D003469 ORTHO05D004084 2.2e-14 85.5 120 39.2
FAN20G1461 Fragaria x ananassa HOM05D003469 ORTHO05D004084 9.2e-13 80.1 140 35.7
SHI03013 Sapria himalayana HOM05D003469 ORTHO05D004084 1.7e-11 75.9 91 40.7
Haze_14035 Corylus avellana HOM05D003469 ORTHO05D004084 1.2e-09 69.7 176 30.7
PRCOL_00004204 Prasinoderma coloniale HOM05D003469 ORTHO05D004084 2.8e-09 68.6 891 20.3
AagrBONN_evm.TU.Sc2ySwM_362.2853 Anthoceros agrestis HOM05D003469 ORTHO05D004084 5.2e-08 64.3 95 34.7
Ca_19033_v3 Cicer arietinum L. HOM05D003469 ORTHO05D004084 1.5e-07 62.8 58 53.4
Sp4g05220 Schrenkiella parvula HOM05D003469 ORTHO05D004084 5.8e-07 60.8 49 59.2


User provided reference genes

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