Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02490 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 2.2e-105 385.6 188 100.0
Aqoxy7G00585 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 1.7e-68 263.1 163 76.1
TAR636G3670 Trochodendron aralioides HOM05D004762 ORTHO05D005972 3.7e-68 261.9 163 77.3
PSO675G7276 Papaver somniferum HOM05D004762 ORTHO05D005972 4.5e-66 255.0 151 78.8
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 8.6e-65 250.8 178 69.1
QL06p052059 Quercus lobata HOM05D004762 ORTHO05D005972 8.6e-65 250.8 162 74.1
PSO017G5956 Papaver somniferum HOM05D004762 ORTHO05D005972 1.9e-64 249.6 147 79.6
PSO478G3676 Papaver somniferum HOM05D004762 ORTHO05D005972 1.9e-64 249.6 151 78.8
Eucgr.G03076 Eucalyptus grandis HOM05D004762 ORTHO05D005972 2.5e-64 249.2 151 76.2
Manes.07G131500 Manihot esculenta HOM05D004762 ORTHO05D005972 7.2e-64 247.7 149 76.5
PSO017G1441 Papaver somniferum HOM05D004762 ORTHO05D005972 9.5e-64 247.3 151 77.5
Atru.BG.273.p Acer truncatum HOM05D004762 ORTHO05D005972 1.2e-63 246.9 163 71.8
Actinidia33916 Actinidia chinensis HOM05D004762 ORTHO05D005972 1.2e-63 246.9 164 72.6
Cfa001301 Carpinus fangiana HOM05D004762 ORTHO05D005972 1.2e-63 246.9 163 73.0
Ciclev10031450m.g Citrus clementina HOM05D004762 ORTHO05D005972 6.1e-63 244.6 157 73.2
Sabra15G0114600 Salix brachista HOM05D004762 ORTHO05D005972 1.0e-62 243.8 149 75.8
CSS0039953 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 1.8e-62 243.0 162 74.1
CSS0044129 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 1.8e-62 243.0 162 74.1
CiPaw.01G300200 Carya illinoinensis HOM05D004762 ORTHO05D005972 4.0e-62 241.9 163 70.6
TWI09G1175 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 5.2e-62 241.5 157 72.0
Potri.012G095500 Populus trichocarpa HOM05D004762 ORTHO05D005972 1.2e-61 240.4 149 75.8
PGR142G3177 Punica granatum HOM05D004762 ORTHO05D005972 1.5e-61 240.0 163 71.8
ClCG07G004360 Citrullus lanatus HOM05D004762 ORTHO05D005972 4.4e-61 238.4 161 70.8
TWI53G2041 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 7.5e-61 237.7 157 71.3
TPR.G15355 Trifolium pratense HOM05D004762 ORTHO05D005972 1.3e-60 236.9 161 68.3
CANSAT56G2662 Cannabis sativa HOM05D004762 ORTHO05D005972 1.7e-60 236.5 151 74.8
Rhsim03G0145100 Rhododendron simsii HOM05D004762 ORTHO05D005972 1.7e-60 236.5 151 73.5
Carub.0004s2241 Capsella rubella HOM05D004762 ORTHO05D005972 2.2e-60 236.1 150 73.3
Thhalv10016619m.g Eutrema salsugineum HOM05D004762 ORTHO05D005972 2.2e-60 236.1 151 72.8
Nn1g09364 Nelumbo nucifera HOM05D004762 ORTHO05D005972 2.2e-60 236.1 162 70.4
AUR62012271 Chenopodium quinoa HOM05D004762 ORTHO05D005972 3.7e-60 235.3 163 67.5
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 6.3e-60 234.6 151 72.8
Aa31LG5G19380 Aethionema arabicum HOM05D004762 ORTHO05D005972 8.3e-60 234.2 155 71.6
A05p06240 Brassica napus HOM05D004762 ORTHO05D005972 8.3e-60 234.2 151 72.8
MELO3C018365.2 Cucumis melo HOM05D004762 ORTHO05D005972 8.3e-60 234.2 157 71.3
FvH4_7g24680 Fragaria vesca HOM05D004762 ORTHO05D005972 8.3e-60 234.2 163 68.7
RcHm_v2.0_Chr1g0370541 Rosa chinensis HOM05D004762 ORTHO05D005972 8.3e-60 234.2 163 68.7
ATR0580G181 Amborella trichopoda HOM05D004762 ORTHO05D005972 1.1e-59 233.8 152 74.3
BcaB02g09041 Brassica carinata HOM05D004762 ORTHO05D005972 1.1e-59 233.8 151 72.8
BcaC02g12136 Brassica carinata HOM05D004762 ORTHO05D005972 1.1e-59 233.8 151 72.8
Sp4g22540 Schrenkiella parvula HOM05D004762 ORTHO05D005972 1.1e-59 233.8 151 72.2
BraA05t19588Z Brassica rapa HOM05D004762 ORTHO05D005972 1.4e-59 233.4 151 72.8
Duzib106G1587 Durio zibethinus HOM05D004762 ORTHO05D005972 1.4e-59 233.4 162 68.5
Sed0015827 Sechium edule HOM05D004762 ORTHO05D005972 1.4e-59 233.4 157 72.6
Psat4g160680 Pisum sativum HOM05D004762 ORTHO05D005972 1.8e-59 233.0 163 66.9
Hma1.2p1_0145F.1_g065350 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 2.4e-59 232.6 163 71.2
Hma1.2p1_2705F.1_g327160 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 2.4e-59 232.6 163 71.2
AT2G40190 Arabidopsis thaliana HOM05D004762 ORTHO05D005972 3.1e-59 232.3 151 72.2
COL.COLO4_23625 Corchorus olitorius HOM05D004762 ORTHO05D005972 3.1e-59 232.3 151 71.5
Thecc.10G014000 Theobroma cacao HOM05D004762 ORTHO05D005972 3.1e-59 232.3 163 66.9
FAN10G2322 Fragaria x ananassa HOM05D004762 ORTHO05D005972 4.1e-59 231.9 163 68.1
Gohir.A13G014500 Gossypium hirsutum HOM05D004762 ORTHO05D005972 4.1e-59 231.9 163 68.1
MD01G1154800 Malus domestica HOM05D004762 ORTHO05D005972 4.1e-59 231.9 163 68.7
arahy.Tifrunner.gnm1.ann1.NBD53L Arachis hypogaea HOM05D004762 ORTHO05D005972 5.4e-59 231.5 167 66.5
Medtr8g027750 Medicago truncatula HOM05D004762 ORTHO05D005972 5.4e-59 231.5 151 70.2
arahy.Tifrunner.gnm1.ann1.BGVI4S Arachis hypogaea HOM05D004762 ORTHO05D005972 7.0e-59 231.1 151 70.9
CsaV3_5G010300 Cucumis sativus L. HOM05D004762 ORTHO05D005972 7.0e-59 231.1 157 71.3
GSVIVG01032791001 Vitis vinifera HOM05D004762 ORTHO05D005972 7.0e-59 231.1 162 69.1
vmacro06958 Vaccinium macrocarpon HOM05D004762 ORTHO05D005972 9.2e-59 230.7 151 73.5
AL108U10020 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 1.2e-58 230.3 151 71.5
BcaC02g12138 Brassica carinata HOM05D004762 ORTHO05D005972 1.2e-58 230.3 151 72.8
C04p07190 Brassica napus HOM05D004762 ORTHO05D005972 1.2e-58 230.3 151 72.8
Sc10g0002460 Simmondsia chinensis HOM05D004762 ORTHO05D005972 1.2e-58 230.3 163 66.9
EL10Ac2g04854 Beta vulgaris HOM05D004762 ORTHO05D005972 1.6e-58 229.9 163 66.3
BolC4t22343H Brassica oleracea HOM05D004762 ORTHO05D005972 2.0e-58 229.6 150 73.3
Zm00001eb030250 Zea mays HOM05D004762 ORTHO05D005972 2.7e-58 229.2 157 67.5
Lj3g0010190 Lotus japonicus HOM05D004762 ORTHO05D005972 3.5e-58 228.8 151 70.9
Gorai.013G017200 Gossypium raimondii HOM05D004762 ORTHO05D005972 4.5e-58 228.4 163 67.5
MD07G1223900 Malus domestica HOM05D004762 ORTHO05D005972 7.8e-58 227.6 163 68.7
Prupe.2G252400 Prunus persica HOM05D004762 ORTHO05D005972 7.8e-58 227.6 163 69.3
AUR62022908 Chenopodium quinoa HOM05D004762 ORTHO05D005972 1.3e-57 226.9 163 65.6
Phvul.010G113600 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 1.3e-57 226.9 151 69.5
ECA238G4598 Erigeron canadensis HOM05D001399 ORTHO05D001670 2.3e-57 226.1 165 66.7
VMungo0331G1989 Vigna mungo HOM05D004762 ORTHO05D005972 2.9e-57 225.7 151 68.2
Gohir.D13G015700 Gossypium hirsutum HOM05D004762 ORTHO05D005972 3.8e-57 225.3 163 68.1
Glyma.16G025200 Glycine max HOM05D004762 ORTHO05D005972 6.6e-57 224.6 151 69.5
Glyma.07G056300 Glycine max HOM05D004762 ORTHO05D005972 1.1e-56 223.8 151 68.9
Lalb_Chr04g0254441 Lupinus albus HOM05D004762 ORTHO05D005972 4.3e-56 221.9 161 64.6
arahy.Tifrunner.gnm1.ann1.YY9F0M Arachis hypogaea HOM05D004762 ORTHO05D005972 7.3e-56 221.1 184 60.3
HanXRQChr14g0459541 Helianthus annuus HOM05D004762 ORTHO05D005972 9.5e-56 220.7 165 64.8
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.6e-55 219.9 193 58.0
FAN06G2944 Fragaria x ananassa HOM05D004762 ORTHO05D005972 4.7e-55 218.4 192 58.3
Ca_23540_v3 Cicer arietinum L. HOM05D004762 ORTHO05D005972 1.0e-54 217.2 184 57.6
HPP92_020134 Vanilla planifolia HOM05D004762 ORTHO05D005972 3.0e-54 215.7 151 66.9
Migut.F00664 Erythranthe guttata HOM05D004762 ORTHO05D005972 2.0e-53 213.0 162 64.2
Oeu011273.2 Olea europaea HOM05D004762 ORTHO05D005972 3.4e-53 212.2 150 69.3
Oeu043882.1 Olea europaea HOM05D004762 ORTHO05D005972 3.4e-53 212.2 161 64.6
Solyc10g076800.2 Solanum lycopersicum HOM05D004762 ORTHO05D005972 4.4e-53 211.8 162 64.2
PGSC0003DMG400019183 Solanum tuberosum HOM05D004762 ORTHO05D005972 4.4e-53 211.8 162 64.2
SGA_v2.0_scaffold44G16679 Striga asiatica HOM05D004762 ORTHO05D005972 5.7e-53 211.5 162 64.2
CDE02G4330 Ceratophyllum demersum HOM05D004762 ORTHO05D005972 1.7e-52 209.9 151 66.2
Cc08_g07190 Coffea canephora HOM05D004762 ORTHO05D005972 3.7e-52 208.8 161 64.0
Nitab4.5_0013304g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.7e-52 208.8 162 63.6
Nitab4.5_0000797g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 4.9e-52 208.4 162 63.6
CAN.G1087.1 Capsicum annuum HOM05D004762 ORTHO05D005972 3.2e-51 205.7 162 63.0
Peaxi162Scf00284g00722 Petunia axillaris HOM05D004762 ORTHO05D005972 3.2e-51 205.7 162 63.6
FAN01G2296 Fragaria x ananassa HOM05D004762 ORTHO05D005972 5.4e-51 204.9 209 52.2
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 9.2e-51 204.1 151 65.6
Lsat_1_v5_gn_2_124101 Lactuca sativa HOM05D004762 ORTHO05D005972 1.2e-50 203.8 136 69.9
Lj8A64T49 Lonicera japonica HOM05D004762 ORTHO05D005972 1.2e-50 203.8 167 61.7
CAN.G1305.22 Capsicum annuum HOM05D004762 ORTHO05D005972 1.6e-50 203.4 162 63.6
Hund15913 Selenicereus undatus HOM05D004762 ORTHO05D005972 1.6e-50 203.4 146 66.4
Os12g0583000 Oryza sativa ssp. japonica HOM05D004762 ORTHO05D005972 4.6e-50 201.8 141 66.7
SalBow6G6782 Salvia bowleyana HOM05D004762 ORTHO05D005972 5.9e-50 201.4 161 64.0
DCAR_007786 Daucus carota HOM05D004762 ORTHO05D005972 7.3e-48 194.5 162 59.9
DCAR_024818 Daucus carota HOM05D004762 ORTHO05D005972 7.3e-48 194.5 148 63.5
Gohir.D08G135600 Gossypium hirsutum HOM05D004762 ORTHO05D005972 5.2e-46 188.3 126 71.4
Hma1.2p1_0523F.1_g172170 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 5.2e-46 188.3 127 72.4
Gorai.004G138800 Gossypium raimondii HOM05D004762 ORTHO05D005972 2.6e-45 186.0 133 67.7
Gohir.D06G056233 Gossypium hirsutum HOM05D004762 ORTHO05D005972 4.9e-44 181.8 133 66.2
Mapoly0096s0017 Marchantia polymorpha HOM05D004762 ORTHO05D005972 1.0e-41 174.1 159 56.6
SMO358G0322 Selaginella moellendorffii HOM05D004762 ORTHO05D005972 8.1e-39 164.5 150 56.0
AagrBONN_evm.TU.Sc2ySwM_228.3247 Anthoceros agrestis HOM05D004762 ORTHO05D005972 1.1e-38 164.1 157 54.1
Pp3c14_26870 Physcomitrium patens HOM05D004762 ORTHO05D005972 2.9e-36 156.0 161 51.6
Dinv21748 Davidia involucrata HOM05D004762 ORTHO05D005972 1.2e-34 150.6 98 73.5
SGA_v2.0_scaffold60G20982 Striga asiatica HOM05D004762 ORTHO05D005972 3.0e-33 146.0 144 53.5
CARHR135230 Cardamine hirsuta HOM05D004762 ORTHO05D005972 8.1e-31 137.9 97 67.0
CBR_g12682 Chara braunii HOM05D004762 ORTHO05D005972 3.4e-29 132.5 167 42.5
Sopen10g028440 Solanum pennellii HOM05D004762 ORTHO05D005972 3.4e-29 132.5 98 65.3
BcaB01g03555 Brassica carinata HOM05D004762 ORTHO05D005972 1.7e-25 120.2 90 66.7
Haze_26859 Corylus avellana HOM05D004762 ORTHO05D005972 2.4e-22 109.8 139 41.7
unitig_748.g8448 Utricularia gibba HOM05D004762 ORTHO05D005972 3.1e-22 109.4 86 62.8
PSO017G2836 Papaver somniferum HOM05D004762 ORTHO05D005972 4.0e-22 109.0 58 77.6
BraA04t18511Z Brassica rapa HOM05D004762 ORTHO05D001193 9.9e-21 104.4 125 46.4
Hma1.2p1_0812F.1_g222370 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 6.4e-20 101.7 83 61.4
Cre01.g058521 Chlamydomonas reinhardtii HOM05D004762 ORTHO05D005972 1.1e-19 100.9 167 40.1
A04p29970 Brassica napus HOM05D004762 ORTHO05D001193 1.4e-19 100.5 127 46.5
SEGI_02041 Sequoiadendron giganteum HOM05D004762 ORTHO05D005972 1.4e-19 100.5 97 51.5
MCO10G125 Micromonas commoda HOM05D004762 ORTHO05D005972 4.6e-18 95.5 200 31.5
Potri.015G093000 Populus trichocarpa HOM05D004762 ORTHO05D005972 1.0e-17 94.4 64 67.2
arahy.Tifrunner.gnm1.ann1.38D1EG Arachis hypogaea HOM05D005637 ORTHO05D006983 7.3e-16 88.2 66 62.1
arahy.Tifrunner.gnm1.ann1.SGI312 Arachis hypogaea HOM05D004762 ORTHO05D005972 1.1e-14 84.3 71 59.2
PRCOL_00001728 Prasinoderma coloniale HOM05D004762 ORTHO05D005972 2.4e-14 83.2 146 35.6
TAR633G0702 Trochodendron aralioides HOM05D003030 ORTHO05D003610 2.2e-12 76.6 47 76.6
Lsat_1_v5_gn_3_79340 Lactuca sativa HOM05D004762 ORTHO05D231769 4.3e-08 62.4 69 50.7
Sed0021837 Sechium edule HOM05D004762 ORTHO05D005972 4.3e-08 62.4 43 67.4
MD02G1220900 Malus domestica HOM05D004762 ORTHO05D005972 3.1e-06 56.2 38 68.4


User provided reference genes

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