Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02489 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 9.2e-69 263.5 136 100.0
TAR636G3670 Trochodendron aralioides HOM05D004762 ORTHO05D005972 1.1e-42 176.8 120 75.8
Aqoxy7G00585 Aquilegia oxysepala HOM05D004762 ORTHO05D005972 3.3e-42 175.3 108 80.6
GSVIVG01032791001 Vitis vinifera HOM05D004762 ORTHO05D005972 5.6e-42 174.5 108 81.5
Manes.07G131500 Manihot esculenta HOM05D004762 ORTHO05D005972 2.8e-41 172.2 108 80.6
Ciclev10031450m.g Citrus clementina HOM05D004762 ORTHO05D005972 3.7e-41 171.8 106 79.2
Lalb_Chr04g0254441 Lupinus albus HOM05D004762 ORTHO05D005972 1.1e-40 170.2 118 72.0
Nn1g09364 Nelumbo nucifera HOM05D004762 ORTHO05D005972 1.1e-40 170.2 108 79.6
MD07G1223900 Malus domestica HOM05D004762 ORTHO05D005972 1.4e-40 169.9 108 78.7
Potri.012G095500 Populus trichocarpa HOM05D004762 ORTHO05D005972 1.4e-40 169.9 108 75.9
vmacro06958 Vaccinium macrocarpon HOM05D004762 ORTHO05D005972 1.4e-40 169.9 108 77.8
Sabra15G0114600 Salix brachista HOM05D004762 ORTHO05D005972 1.8e-40 169.5 108 76.9
Cfa001301 Carpinus fangiana HOM05D004762 ORTHO05D005972 2.4e-40 169.1 108 77.8
Atru.BG.273.p Acer truncatum HOM05D004762 ORTHO05D005972 4.0e-40 168.3 108 77.8
QL06p052059 Quercus lobata HOM05D004762 ORTHO05D005972 4.0e-40 168.3 108 77.8
CiPaw.01G300200 Carya illinoinensis HOM05D004762 ORTHO05D005972 5.3e-40 167.9 108 76.9
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 5.3e-40 167.9 106 78.3
Thecc.10G014000 Theobroma cacao HOM05D004762 ORTHO05D005972 5.3e-40 167.9 108 75.9
CSS0039953 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 6.9e-40 167.5 108 77.8
CSS0044129 Camellia sinensis var. sinensis HOM05D004762 ORTHO05D005972 6.9e-40 167.5 108 77.8
ClCG07G004360 Citrullus lanatus HOM05D004762 ORTHO05D005972 6.9e-40 167.5 120 70.8
PSO675G7276 Papaver somniferum HOM05D004762 ORTHO05D005972 6.9e-40 167.5 106 77.4
AUR62012271 Chenopodium quinoa HOM05D004762 ORTHO05D005972 9.0e-40 167.2 106 77.4
AUR62022908 Chenopodium quinoa HOM05D004762 ORTHO05D005972 9.0e-40 167.2 106 76.4
Lj8A64T49 Lonicera japonica HOM05D004762 ORTHO05D005972 9.0e-40 167.2 108 78.7
PSO017G1441 Papaver somniferum HOM05D004762 ORTHO05D005972 9.0e-40 167.2 106 75.5
Rhsim03G0145100 Rhododendron simsii HOM05D004762 ORTHO05D005972 9.0e-40 167.2 108 75.9
Solyc10g076800.2 Solanum lycopersicum HOM05D004762 ORTHO05D005972 9.0e-40 167.2 117 71.8
PGSC0003DMG400019183 Solanum tuberosum HOM05D004762 ORTHO05D005972 9.0e-40 167.2 117 71.8
Sc10g0002460 Simmondsia chinensis HOM05D004762 ORTHO05D005972 1.2e-39 166.8 108 75.9
Nitab4.5_0013304g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 1.5e-39 166.4 115 73.0
Sed0015827 Sechium edule HOM05D004762 ORTHO05D005972 1.5e-39 166.4 108 76.9
TWI53G2041 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 1.5e-39 166.4 108 77.8
EL10Ac2g04854 Beta vulgaris HOM05D004762 ORTHO05D005972 2.0e-39 166.0 106 78.3
PSO478G3676 Papaver somniferum HOM05D004762 ORTHO05D005972 2.0e-39 166.0 106 77.4
CAN.G1087.1 Capsicum annuum HOM05D004762 ORTHO05D005972 2.6e-39 165.6 112 73.2
CsaV3_5G010300 Cucumis sativus L. HOM05D004762 ORTHO05D005972 2.6e-39 165.6 120 70.8
FvH4_7g24680 Fragaria vesca HOM05D004762 ORTHO05D005972 2.6e-39 165.6 108 75.9
FAN06G2944 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.6e-39 165.6 108 75.9
FAN10G2322 Fragaria x ananassa HOM05D004762 ORTHO05D005972 2.6e-39 165.6 108 75.9
PSO017G5956 Papaver somniferum HOM05D004762 ORTHO05D005972 2.6e-39 165.6 106 75.5
RcHm_v2.0_Chr1g0370541 Rosa chinensis HOM05D004762 ORTHO05D005972 2.6e-39 165.6 108 76.9
TWI09G1175 Tripterygium wilfordii HOM05D004762 ORTHO05D005972 2.6e-39 165.6 108 75.9
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 4.5e-39 164.9 121 69.4
CAN.G1305.22 Capsicum annuum HOM05D004762 ORTHO05D005972 5.8e-39 164.5 112 72.3
CANSAT56G2662 Cannabis sativa HOM05D004762 ORTHO05D005972 7.6e-39 164.1 106 77.4
Duzib106G1587 Durio zibethinus HOM05D004762 ORTHO05D005972 7.6e-39 164.1 108 74.1
Eucgr.G03076 Eucalyptus grandis HOM05D004762 ORTHO05D005972 7.6e-39 164.1 108 75.0
FAN01G2296 Fragaria x ananassa HOM05D004762 ORTHO05D005972 7.6e-39 164.1 107 75.7
Peaxi162Scf00284g00722 Petunia axillaris HOM05D004762 ORTHO05D005972 7.6e-39 164.1 115 73.0
ECA238G4598 Erigeron canadensis HOM05D001399 ORTHO05D001670 9.9e-39 163.7 106 78.3
Gorai.013G017200 Gossypium raimondii HOM05D004762 ORTHO05D005972 9.9e-39 163.7 108 74.1
Prupe.2G252400 Prunus persica HOM05D004762 ORTHO05D005972 9.9e-39 163.7 106 76.4
arahy.Tifrunner.gnm1.ann1.YY9F0M Arachis hypogaea HOM05D004762 ORTHO05D005972 1.7e-38 162.9 106 76.4
Nitab4.5_0000797g0010 Nicotiana tabacum HOM05D004762 ORTHO05D005972 1.7e-38 162.9 115 71.3
COL.COLO4_23625 Corchorus olitorius HOM05D004762 ORTHO05D005972 2.2e-38 162.5 108 75.0
Gohir.D13G015700 Gossypium hirsutum HOM05D004762 ORTHO05D005972 2.2e-38 162.5 108 74.1
MD01G1154800 Malus domestica HOM05D004762 ORTHO05D005972 6.4e-38 161.0 106 77.4
HPP92_020134 Vanilla planifolia HOM05D004762 ORTHO05D005972 6.4e-38 161.0 106 75.5
arahy.Tifrunner.gnm1.ann1.BGVI4S Arachis hypogaea HOM05D004762 ORTHO05D005972 8.4e-38 160.6 106 75.5
arahy.Tifrunner.gnm1.ann1.NBD53L Arachis hypogaea HOM05D004762 ORTHO05D005972 8.4e-38 160.6 106 75.5
Migut.F00664 Erythranthe guttata HOM05D004762 ORTHO05D005972 8.4e-38 160.6 105 77.1
Hma1.2p1_0523F.1_g172170 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 8.4e-38 160.6 108 73.1
Phvul.010G113600 Phaseolus vulgaris HOM05D004762 ORTHO05D005972 8.4e-38 160.6 106 74.5
Glyma.07G056300 Glycine max HOM05D004762 ORTHO05D005972 1.1e-37 160.2 106 73.6
Hma1.2p1_0145F.1_g065350 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.1e-37 160.2 108 74.1
PGR142G3177 Punica granatum HOM05D004762 ORTHO05D005972 1.1e-37 160.2 106 75.5
Aa31LG5G19380 Aethionema arabicum HOM05D004762 ORTHO05D005972 1.4e-37 159.8 108 74.1
Hma1.2p1_2705F.1_g327160 Hydrangea macrophylla HOM05D004762 ORTHO05D005972 1.4e-37 159.8 108 74.1
AT2G40190 Arabidopsis thaliana HOM05D004762 ORTHO05D005972 1.9e-37 159.5 108 73.1
Lj3g0010190 Lotus japonicus HOM05D004762 ORTHO05D005972 1.9e-37 159.5 106 74.5
Os12g0583000 Oryza sativa ssp. japonica HOM05D004762 ORTHO05D005972 1.9e-37 159.5 105 75.2
AL108U10020 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 2.4e-37 159.1 115 68.7
AL4G37920 Arabidopsis lyrata HOM05D004762 ORTHO05D005972 2.4e-37 159.1 115 68.7
QL11p009420 Quercus lobata HOM05D004762 ORTHO05D005972 2.4e-37 159.1 109 75.2
Nitab4.5_0006049g0030 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.2e-37 158.7 112 71.4
SalBow6G6782 Salvia bowleyana HOM05D004762 ORTHO05D005972 3.2e-37 158.7 104 76.0
Thhalv10016619m.g Eutrema salsugineum HOM05D004762 ORTHO05D005972 4.2e-37 158.3 115 70.4
Lsat_1_v5_gn_2_124101 Lactuca sativa HOM05D004762 ORTHO05D005972 5.5e-37 157.9 106 75.5
Sp4g22540 Schrenkiella parvula HOM05D004762 ORTHO05D005972 7.1e-37 157.5 115 69.6
Zm00001eb030250 Zea mays HOM05D004762 ORTHO05D005972 7.1e-37 157.5 105 73.3
HanXRQChr14g0459541 Helianthus annuus HOM05D004762 ORTHO05D005972 9.3e-37 157.1 106 75.5
Psat4g160680 Pisum sativum HOM05D004762 ORTHO05D005972 9.3e-37 157.1 106 74.5
BcaB02g09041 Brassica carinata HOM05D004762 ORTHO05D005972 1.2e-36 156.8 120 66.7
CDE02G4330 Ceratophyllum demersum HOM05D004762 ORTHO05D005972 1.2e-36 156.8 108 74.1
Carub.0004s2241 Capsella rubella HOM05D004762 ORTHO05D005972 1.6e-36 156.4 115 68.7
Glyma.16G025200 Glycine max HOM05D004762 ORTHO05D005972 1.6e-36 156.4 106 72.6
SEGI_20752 Sequoiadendron giganteum HOM05D004762 ORTHO05D005972 2.1e-36 156.0 108 70.4
BraA05t19588Z Brassica rapa HOM05D004762 ORTHO05D005972 2.7e-36 155.6 115 68.7
ATR0580G181 Amborella trichopoda HOM05D004762 ORTHO05D005972 3.5e-36 155.2 108 69.4
A05p06240 Brassica napus HOM05D004762 ORTHO05D005972 3.5e-36 155.2 115 68.7
Ca_23540_v3 Cicer arietinum L. HOM05D004762 ORTHO05D005972 6.0e-36 154.5 106 73.6
Hund15913 Selenicereus undatus HOM05D004762 ORTHO05D005972 6.0e-36 154.5 108 72.2
VMungo0331G1989 Vigna mungo HOM05D004762 ORTHO05D005972 6.0e-36 154.5 106 72.6
Cc08_g07190 Coffea canephora HOM05D004762 ORTHO05D005972 7.9e-36 154.1 108 70.4
TPR.G15355 Trifolium pratense HOM05D004762 ORTHO05D005972 7.9e-36 154.1 106 72.6
BolC4t22343H Brassica oleracea HOM05D004762 ORTHO05D005972 1.3e-35 153.3 114 68.4
BraA04t18511Z Brassica rapa HOM05D004762 ORTHO05D001193 1.3e-35 153.3 115 67.8
BcaC02g12138 Brassica carinata HOM05D004762 ORTHO05D005972 1.8e-35 152.9 115 67.8
C04p07190 Brassica napus HOM05D004762 ORTHO05D005972 1.8e-35 152.9 115 67.8
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 3.0e-35 152.1 113 68.1
Oeu043882.1 Olea europaea HOM05D004762 ORTHO05D005972 3.0e-35 152.1 104 73.1
Medtr8g027750 Medicago truncatula HOM05D004762 ORTHO05D005972 3.9e-35 151.8 106 72.6
Oeu011273.2 Olea europaea HOM05D004762 ORTHO05D005972 3.9e-35 151.8 104 71.2
TAR633G0702 Trochodendron aralioides HOM05D003030 ORTHO05D003610 1.1e-34 150.2 95 78.9
Gohir.D06G056233 Gossypium hirsutum HOM05D004762 ORTHO05D005972 1.5e-34 149.8 104 70.2
EL10Ac2g03328 Beta vulgaris HOM05D004762 ORTHO05D005972 5.6e-34 147.9 126 64.3
DCAR_007786 Daucus carota HOM05D004762 ORTHO05D005972 6.2e-33 144.4 100 73.0
Mapoly0096s0017 Marchantia polymorpha HOM05D004762 ORTHO05D005972 6.2e-33 144.4 106 68.9
BcaB06g29139 Brassica carinata HOM05D004762 ORTHO05D005972 1.4e-32 143.3 120 62.5
DCAR_024818 Daucus carota HOM05D004762 ORTHO05D005972 4.0e-32 141.7 109 65.1
unitig_748.g8448 Utricularia gibba HOM05D004762 ORTHO05D005972 4.0e-32 141.7 104 67.3
Potri.015G093000 Populus trichocarpa HOM05D004762 ORTHO05D005972 5.3e-32 141.4 108 66.7
EL10Ac6g13956 Beta vulgaris HOM05D004762 ORTHO05D005972 4.5e-31 138.3 91 74.7
AagrBONN_evm.TU.Sc2ySwM_228.3247 Anthoceros agrestis HOM05D004762 ORTHO05D005972 5.8e-31 137.9 104 63.5
BcaB01g03555 Brassica carinata HOM05D004762 ORTHO05D005972 2.2e-30 136.0 109 64.2
Pp3c14_26870 Physcomitrium patens HOM05D004762 ORTHO05D005972 1.1e-29 133.7 104 61.5
CBR_g12682 Chara braunii HOM05D004762 ORTHO05D005972 3.2e-29 132.1 120 60.0
Gohir.A13G014500 Gossypium hirsutum HOM05D004762 ORTHO05D005972 4.2e-29 131.7 108 63.9
SMO358G0322 Selaginella moellendorffii HOM05D004762 ORTHO05D005972 5.5e-29 131.3 102 67.6
A04p29970 Brassica napus HOM05D004762 ORTHO05D001193 3.7e-25 118.6 89 67.4
Gorai.004G138800 Gossypium raimondii HOM05D004762 ORTHO05D005972 9.4e-21 104.0 104 53.8
Gohir.D08G135600 Gossypium hirsutum HOM05D004762 ORTHO05D005972 4.6e-20 101.7 104 51.9
SGA_v2.0_scaffold60G20982 Striga asiatica HOM05D004762 ORTHO05D005972 7.9e-20 100.9 67 74.6
EL10Ac6g14685 Beta vulgaris HOM05D004762 ORTHO05D005972 3.0e-19 99.0 103 53.4
Cre01.g058521 Chlamydomonas reinhardtii HOM05D004762 ORTHO05D005972 1.1e-18 97.1 177 36.2
PRCOL_00001728 Prasinoderma coloniale HOM05D004762 ORTHO05D005972 3.3e-18 95.5 96 56.2
BcaC01g05421 Brassica carinata HOM05D002909 ORTHO05D000493 5.7e-18 94.7 71 69.0
C03p26800 Brassica napus HOM05D000223 ORTHO05D001193 5.7e-18 94.7 71 69.0
BolC3t15065H Brassica oleracea HOM05D000223 ORTHO05D001193 5.7e-18 94.7 71 69.0
MCO10G125 Micromonas commoda HOM05D004762 ORTHO05D005972 1.3e-17 93.6 149 40.9
Actinidia33916 Actinidia chinensis HOM05D004762 ORTHO05D005972 3.8e-14 82.0 47 83.0
Haze_26859 Corylus avellana HOM05D004762 ORTHO05D005972 5.0e-14 81.6 111 44.1
EL10Ac3g06411 Beta vulgaris HOM05D004762 ORTHO05D005972 5.5e-13 78.2 44 81.8
Nitab4.5_0001180g0090 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.9e-11 72.0 57 61.4
MELO3C018365.2 Cucumis melo HOM05D004762 ORTHO05D005972 7.4e-10 67.8 39 84.6
MD13G1267900 Malus domestica HOM05D004762 ORTHO05D005972 3.7e-09 65.5 40 77.5
BcaC02g12136 Brassica carinata HOM05D004762 ORTHO05D005972 6.3e-09 64.7 39 79.5
Gohir.D05G318650 Gossypium hirsutum HOM05D004762 ORTHO05D005972 8.2e-09 64.3 37 81.1
Gorai.012G079400 Gossypium raimondii HOM05D004762 ORTHO05D046822 8.2e-09 64.3 37 81.1
Gohir.D07G108366 Gossypium hirsutum HOM05D004762 ORTHO05D046822 2.4e-08 62.8 37 78.4
Nitab4.5_0004804g0050 Nicotiana tabacum HOM05D004762 ORTHO05D005972 3.1e-08 62.4 54 55.6
SGA_v2.0_scaffold44G16679 Striga asiatica HOM05D004762 ORTHO05D005972 4.1e-08 62.0 35 85.7


User provided reference genes

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