Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 8.9e-96 353.6 178 100.0
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 3.6e-73 278.5 179 78.8
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 1.1e-72 276.9 178 77.0
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 1.8e-72 276.2 177 78.5
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 4.0e-72 275.0 177 76.3
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 5.2e-72 274.6 177 78.0
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 1.5e-71 273.1 177 77.4
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 3.4e-71 271.9 181 75.1
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 5.8e-71 271.2 177 76.8
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 5.8e-71 271.2 177 76.8
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 5.8e-71 271.2 172 76.7
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 7.6e-71 270.8 177 75.7
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 9.9e-71 270.4 152 87.5
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 4.9e-70 268.1 176 75.6
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 1.1e-69 266.9 177 75.1
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 2.4e-69 265.8 179 75.4
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 5.4e-69 264.6 176 75.0
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 1.2e-68 263.5 177 75.1
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 2.7e-68 262.3 176 75.0
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 4.6e-68 261.5 177 75.1
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 6.0e-68 261.2 152 84.2
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 6.0e-68 261.2 177 72.9
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 1.3e-67 260.0 182 72.5
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 3.0e-67 258.8 177 74.0
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 3.9e-67 258.5 168 74.4
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 3.9e-67 258.5 177 74.6
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 5.1e-67 258.1 180 72.8
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 8.6e-67 257.3 178 71.3
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.5e-66 255.8 179 72.1
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 2.5e-66 255.8 180 72.2
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 4.3e-66 255.0 180 71.1
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 5.6e-66 254.6 180 71.7
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 1.6e-65 253.1 177 73.4
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 1.6e-65 253.1 177 73.4
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 1.6e-65 253.1 178 70.8
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 1.1e-64 250.4 177 72.9
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 1.8e-64 249.6 175 72.0
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 2.4e-64 249.2 178 70.2
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 2.4e-64 249.2 175 70.9
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 2.4e-64 249.2 177 72.3
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 3.1e-64 248.8 177 73.4
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 3.1e-64 248.8 166 74.1
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 2.0e-63 246.1 168 74.4
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.6e-63 245.7 180 70.0
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 3.4e-63 245.4 146 81.5
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 1.7e-62 243.0 177 67.8
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 3.8e-62 241.9 177 68.4
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 4.9e-62 241.5 177 67.8
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 8.4e-62 240.7 167 73.7
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 1.4e-61 240.0 165 73.9
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 1.9e-61 239.6 180 68.9
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 2.4e-61 239.2 177 67.2
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 2.4e-61 239.2 147 78.9
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 3.2e-61 238.8 180 67.8
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 3.2e-61 238.8 165 70.3
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 5.4e-61 238.0 173 70.5
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.1e-60 236.1 180 67.2
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 2.7e-60 235.7 172 68.0
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 2.7e-60 235.7 164 72.6
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 3.5e-60 235.3 180 67.2
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 3.5e-60 235.3 177 67.2
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 3.5e-60 235.3 180 67.2
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 7.8e-60 234.2 173 67.6
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 1.0e-59 233.8 176 68.2
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 1.7e-59 233.0 164 70.1
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 2.3e-59 232.6 178 67.4
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 3.9e-59 231.9 179 68.2
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 6.6e-59 231.1 135 83.7
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 8.7e-59 230.7 169 69.8
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 8.7e-59 230.7 157 70.7
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 1.5e-58 229.9 165 71.5
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 2.5e-58 229.2 177 67.2
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 3.3e-58 228.8 138 81.9
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 5.6e-58 228.0 153 75.8
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 5.6e-58 228.0 153 75.8
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 9.6e-58 227.3 138 81.9
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 8.1e-57 224.2 206 59.7
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 1.8e-56 223.0 172 64.0
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 2.4e-56 222.6 164 66.5
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 2.4e-56 222.6 177 66.7
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 3.1e-56 222.2 236 54.2
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 1.2e-55 220.3 173 63.6
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 5.8e-55 218.0 172 62.8
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 7.6e-55 217.6 138 76.8
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 4.9e-54 214.9 163 66.9
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 6.4e-54 214.5 172 61.6
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 1.9e-53 213.0 156 68.6
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 2.4e-53 212.6 163 66.9
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 3.2e-53 212.2 179 64.2
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 4.2e-53 211.8 132 77.3
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 2.1e-52 209.5 136 74.3
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 2.1e-52 209.5 137 75.9
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 2.7e-52 209.1 179 60.3
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 6.0e-52 208.0 139 74.1
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 3.9e-51 205.3 164 68.9
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 1.5e-50 203.4 176 60.2
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 2.5e-50 202.6 178 60.7
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 2.1e-49 199.5 125 75.2
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 3.7e-49 198.7 135 69.6
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 6.2e-49 198.0 136 69.9
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 8.1e-49 197.6 134 70.1
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 1.4e-48 196.8 134 70.1
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 3.1e-48 195.7 134 69.4
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 9.0e-48 194.1 157 63.7
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 2.0e-47 193.0 144 66.7
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 2.6e-47 192.6 177 59.3
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 5.8e-47 191.4 107 85.0
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 7.1e-45 184.5 134 67.2
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 6.7e-43 177.9 113 73.5
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 1.5e-42 176.8 143 65.0
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 4.3e-42 175.3 143 63.6
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 2.1e-41 172.9 134 64.2
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 2.4e-40 169.5 123 65.9
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 1.0e-38 164.1 179 53.1
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 1.4e-37 160.2 188 52.7
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 4.6e-36 155.2 165 53.9
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.3e-33 147.1 165 52.7
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 8.2e-33 144.4 114 59.6
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 5.3e-32 141.7 149 51.0
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 6.7e-27 124.8 118 56.8
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 1.5e-26 123.6 100 60.0
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 1.9e-26 123.2 135 48.9
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 2.8e-25 119.4 104 56.7
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 7.7e-23 111.3 80 67.5
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.0e-22 110.9 111 55.9
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 2.2e-22 109.8 72 77.8
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 6.7e-19 98.2 85 60.0
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 2.6e-18 96.3 137 42.3
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 5.0e-14 82.0 81 53.1
Nn2g14856 Nelumbo nucifera HOM05D005995 ORTHO05D007362 9.4e-13 77.8 62 69.4
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 4.7e-12 75.5 175 32.0
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 1.1e-08 64.3 118 37.3
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 3.1e-08 62.8 133 33.8
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 2.6e-07 59.7 35 74.3


User provided reference genes

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