Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02276 Aquilegia oxysepala HOM05D004098 ORTHO05D005215 0.0e+00 1323.1 757 100.0
TAR626G1397 Trochodendron aralioides HOM05D004098 ORTHO05D005215 5.3e-291 1004.2 767 79.0
Nn2g14376 Nelumbo nucifera HOM05D004098 ORTHO05D005215 8.0e-279 963.8 767 78.0
PSO675G3414 Papaver somniferum HOM05D004098 ORTHO05D005215 5.2e-270 934.5 770 74.3
PSO541G4185 Papaver somniferum HOM05D004098 ORTHO05D005215 7.5e-269 930.6 770 74.0
Manes.01G008000 Manihot esculenta HOM05D004098 ORTHO05D005215 3.7e-268 928.3 760 74.7
Ciclev10007566m.g Citrus clementina HOM05D004098 ORTHO05D005215 3.6e-263 911.8 763 74.3
Cfa016972 Carpinus fangiana HOM05D004098 ORTHO05D005215 2.2e-260 902.5 764 74.5
Dinv19633 Davidia involucrata HOM05D004098 ORTHO05D005215 2.2e-260 902.5 766 75.1
Rhsim04G0006500 Rhododendron simsii HOM05D004098 ORTHO05D005215 2.8e-260 902.1 803 60.3
TWI14G0432 Tripterygium wilfordii HOM05D004098 ORTHO05D005215 2.4e-259 899.0 766 74.7
TWI39G0299 Tripterygium wilfordii HOM05D004098 ORTHO05D005215 2.4e-259 899.0 766 74.7
GSVIVG01014864001 Vitis vinifera HOM05D004098 ORTHO05D005215 3.5e-258 895.2 760 74.6
Prupe.6G036900 Prunus persica HOM05D004098 ORTHO05D005215 5.9e-258 894.4 765 73.2
Actinidia37106 Actinidia chinensis HOM05D004098 ORTHO05D005215 7.8e-258 894.0 764 73.4
MD11G1047800 Malus domestica HOM05D004098 ORTHO05D005215 3.3e-256 888.6 763 72.9
Dinv42526 Davidia involucrata HOM05D004098 ORTHO05D005215 4.7e-255 884.8 650 71.2
Potri.011G170000 Populus trichocarpa HOM05D004098 ORTHO05D005215 1.4e-254 883.2 766 72.6
Atru.chr2.3913 Acer truncatum HOM05D004098 ORTHO05D005215 2.3e-254 882.5 647 71.3
CiPaw.11G211200 Carya illinoinensis HOM05D004098 ORTHO05D005215 8.9e-254 880.6 767 73.7
Manes.05G203450 Manihot esculenta HOM05D004098 ORTHO05D005215 2.6e-253 879.0 762 72.8
COL.COLO4_07798 Corchorus olitorius HOM05D004098 ORTHO05D005215 1.7e-252 876.3 755 73.0
Oeu052018.2 Olea europaea HOM05D004098 ORTHO05D005215 1.7e-252 876.3 787 69.8
Sc03g0011840 Simmondsia chinensis HOM05D004098 ORTHO05D005215 1.3e-249 866.7 765 70.2
DCAR_016814 Daucus carota HOM05D004098 ORTHO05D005215 8.6e-249 864.0 787 69.3
MD03G1045600 Malus domestica HOM05D004098 ORTHO05D005215 1.4e-246 856.7 763 71.2
Duzib268G0918 Durio zibethinus HOM05D004098 ORTHO05D005215 1.8e-246 856.3 763 72.0
Potri.001G473100 Populus trichocarpa HOM05D004098 ORTHO05D005215 1.8e-246 856.3 769 72.0
Lj8C185G3 Lonicera japonica HOM05D004098 ORTHO05D005215 8.9e-246 854.0 859 65.7
Peaxi162Scf00018g00064 Petunia axillaris HOM05D004098 ORTHO05D005215 8.9e-246 854.0 799 68.0
Lj3g0001916 Lotus japonicus HOM05D004098 ORTHO05D005215 7.5e-245 850.9 765 71.4
SalBow8G2465 Salvia bowleyana HOM05D004098 ORTHO05D005215 2.9e-244 849.0 780 69.2
PGR083G2418 Punica granatum HOM05D004098 ORTHO05D005215 8.3e-244 847.4 762 70.3
Gohir.A04G000400 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.1e-243 847.0 763 71.8
CANSAT11G1316 Cannabis sativa HOM05D004098 ORTHO05D005215 1.4e-243 846.7 768 71.1
Gohir.D05G388750 Gossypium hirsutum HOM05D004098 ORTHO05D005215 3.2e-243 845.5 763 71.7
Hma1.2p1_0321F.1_g124430 Hydrangea macrophylla HOM05D004098 ORTHO05D005215 5.4e-243 844.7 767 72.1
Gorai.009G455400 Gossypium raimondii HOM05D004098 ORTHO05D005215 7.0e-243 844.3 764 71.7
Gohir.D05G388800 Gossypium hirsutum HOM05D004098 ORTHO05D005215 2.0e-242 842.8 764 71.6
Cc05_g15840 Coffea canephora HOM05D004098 ORTHO05D005215 8.6e-241 837.4 766 70.9
RcHm_v2.0_Chr5g0074241 Rosa chinensis HOM05D004098 ORTHO05D005215 1.1e-240 837.0 769 71.4
FAN16G0876 Fragaria x ananassa HOM05D004098 ORTHO05D005215 2.5e-240 835.9 767 71.3
THA.LOC104813473 Tarenaya hassleriana HOM05D004098 ORTHO05D005215 1.2e-239 833.6 761 69.4
Phvul.005G006500 Phaseolus vulgaris HOM05D004098 ORTHO05D005215 1.6e-239 833.2 767 70.3
FAN21G3119 Fragaria x ananassa HOM05D004098 ORTHO05D005215 1.1e-238 830.5 767 71.2
Migut.M01572 Erythranthe guttata HOM05D004098 ORTHO05D005215 3.1e-238 828.9 766 69.3
Sabra11G0137000 Salix brachista HOM05D004098 ORTHO05D005215 3.1e-238 828.9 832 66.2
arahy.Tifrunner.gnm1.ann1.36GALV Arachis hypogaea HOM05D004098 ORTHO05D005215 6.8e-238 827.8 789 69.6
QL08p000136 Quercus lobata HOM05D004098 ORTHO05D005215 1.2e-237 827.0 780 71.7
FvH4_3g41350 Fragaria vesca HOM05D004098 ORTHO05D005215 1.5e-237 826.6 767 71.1
FAN11G1160 Fragaria x ananassa HOM05D004098 ORTHO05D005215 3.4e-237 825.5 767 70.9
FAN25G0546 Fragaria x ananassa HOM05D004098 ORTHO05D005215 5.8e-237 824.7 785 70.2
Lalb_Chr15g0079811 Lupinus albus HOM05D004098 ORTHO05D005215 3.7e-236 822.0 767 70.1
arahy.Tifrunner.gnm1.ann1.FI1VU9 Arachis hypogaea HOM05D004098 ORTHO05D005215 6.4e-236 821.2 767 70.5
VMungo1080G0600 Vigna mungo HOM05D004098 ORTHO05D005215 8.3e-236 820.8 763 69.9
Glyma.04G116700 Glycine max HOM05D004098 ORTHO05D005215 4.1e-235 818.5 766 69.8
Nitab4.5_0000611g0190 Nicotiana tabacum HOM05D004098 ORTHO05D005215 4.1e-235 818.5 799 57.4
MSTRG.16125 Avicennia marina HOM05D004098 ORTHO05D005215 5.4e-235 818.1 764 67.9
PGSC0003DMG400011237 Solanum tuberosum HOM05D004098 ORTHO05D005215 9.2e-235 817.4 764 69.0
Thecc.07G000300 Theobroma cacao HOM05D004098 ORTHO05D005215 9.2e-235 817.4 763 70.4
DCAR_019936 Daucus carota HOM05D004098 ORTHO05D005215 2.1e-234 816.2 806 58.1
Lalb_Chr18g0048751 Lupinus albus HOM05D004098 ORTHO05D005215 7.8e-234 814.3 766 69.1
Glyma.06G320100 Glycine max HOM05D004098 ORTHO05D005215 1.0e-233 813.9 765 70.1
Solyc10g005650.3 Solanum lycopersicum HOM05D004098 ORTHO05D005215 5.1e-233 811.6 764 68.7
Sopen10g001620 Solanum pennellii HOM05D004098 ORTHO05D005215 8.6e-233 810.8 764 68.8
Eucgr.F01979 Eucalyptus grandis HOM05D004098 ORTHO05D005215 1.1e-232 810.4 761 68.6
HanXRQChr05g0160701 Helianthus annuus HOM05D004098 ORTHO05D005215 1.1e-232 810.4 762 69.0
Lsat_1_v5_gn_5_241 Lactuca sativa HOM05D004098 ORTHO05D005215 2.0e-229 799.7 775 68.8
CARHR269690 Cardamine hirsuta HOM05D004098 ORTHO05D005215 1.3e-228 797.0 762 66.7
ECA246G1615 Erigeron canadensis HOM05D004098 ORTHO05D005215 1.4e-227 793.5 760 68.2
AL8G31920 Arabidopsis lyrata HOM05D004098 ORTHO05D005215 7.1e-227 791.2 757 67.4
AT5G56290 Arabidopsis thaliana HOM05D004098 ORTHO05D005215 3.5e-226 788.9 757 67.6
Medtr3g009230 Medicago truncatula HOM05D004098 ORTHO05D005215 3.5e-226 788.9 768 68.9
MELO3C014028.2 Cucumis melo HOM05D004098 ORTHO05D005215 1.9e-224 783.1 763 68.7
CsaV3_3G003580 Cucumis sativus L. HOM05D004098 ORTHO05D005215 3.3e-224 782.3 763 68.8
Nitab4.5_0004488g0010 Nicotiana tabacum HOM05D004098 ORTHO05D005215 4.3e-224 781.9 811 64.1
BcaB01g04390 Brassica carinata HOM05D004098 ORTHO05D005215 2.8e-223 779.2 764 66.5
Ca_14121_v3 Cicer arietinum L. HOM05D004098 ORTHO05D005215 6.2e-223 778.1 768 68.5
unitig_749.g13703 Utricularia gibba HOM05D004098 ORTHO05D005215 1.1e-222 777.3 775 64.9
BolC3t14019H Brassica oleracea HOM05D004098 ORTHO05D005215 1.4e-222 776.9 785 64.3
C03p15880 Brassica napus HOM05D004098 ORTHO05D005215 1.8e-222 776.5 759 66.1
Psat5g230760 Pisum sativum HOM05D004098 ORTHO05D005215 2.4e-222 776.2 768 67.1
Thhalv10012791m.g Eutrema salsugineum HOM05D004098 ORTHO05D005215 5.8e-221 771.5 757 65.8
BraA10t43460Z Brassica rapa HOM05D004098 ORTHO05D005215 2.2e-220 769.6 795 63.8
BraA03t10663Z Brassica rapa HOM05D004098 ORTHO05D005215 6.4e-220 768.1 786 57.6
Carub.0008s1661 Capsella rubella HOM05D004098 ORTHO05D005215 8.4e-220 767.7 762 66.4
Aa31LG3G12200 Aethionema arabicum HOM05D004098 ORTHO05D005215 9.3e-219 764.2 758 66.4
CAN.G492.64 Capsicum annuum HOM05D004098 ORTHO05D005215 2.1e-218 763.1 763 65.5
AUR62043123 Chenopodium quinoa HOM05D004098 ORTHO05D005215 6.0e-218 761.5 764 66.5
A03p13590 Brassica napus HOM05D004098 ORTHO05D005215 5.1e-217 758.4 759 65.5
A10p13580 Brassica napus HOM05D004098 ORTHO05D005215 2.5e-216 756.1 757 65.5
BcaC01g06414 Brassica carinata HOM05D004098 ORTHO05D005215 4.8e-215 751.9 760 65.3
TPR.G16705 Trifolium pratense HOM05D004098 ORTHO05D005215 1.1e-214 750.7 654 63.1
CSS0008075 Camellia sinensis var. sinensis HOM05D004098 ORTHO05D005215 1.4e-214 750.4 696 70.7
Sp6g18140 Schrenkiella parvula HOM05D004098 ORTHO05D005215 5.3e-214 748.4 760 65.1
ClCG10G003580 Citrullus lanatus HOM05D004098 ORTHO05D005215 9.0e-214 747.7 848 62.6
BolC9t57610H Brassica oleracea HOM05D004098 ORTHO05D005215 2.0e-213 746.5 760 64.7
C09p47570 Brassica napus HOM05D004098 ORTHO05D005215 3.8e-204 715.7 761 63.7
Actinidia35440 Actinidia chinensis HOM05D004098 ORTHO05D005215 5.5e-203 711.8 780 52.8
MSTRG.7048 Avicennia marina HOM05D004098 ORTHO05D005215 6.0e-202 708.4 762 61.3
Haze_09929 Corylus avellana HOM05D004098 ORTHO05D005215 4.3e-200 702.2 799 61.5
EL10Ac4g07494 Beta vulgaris HOM05D004098 ORTHO05D005215 9.6e-200 701.0 763 63.2
SGA_v2.0_scaffold7G03562 Striga asiatica HOM05D004098 ORTHO05D005215 7.6e-197 691.4 818 60.5
BcaB05g22257 Brassica carinata HOM05D004098 ORTHO05D005215 6.5e-196 688.3 792 59.1
ATR0751G081 Amborella trichopoda HOM05D004098 ORTHO05D005215 1.2e-189 667.5 731 63.2
BcaC04g20111 Brassica carinata HOM05D004098 ORTHO05D005215 1.4e-182 644.0 761 56.5
Sed0000599 Sechium edule HOM05D004098 ORTHO05D005215 7.7e-181 638.3 572 63.1
Hma1.2p1_0321F.1_g124440 Hydrangea macrophylla HOM05D004098 ORTHO05D005215 1.1e-176 624.4 553 76.3
ClCG00G000320 Citrullus lanatus HOM05D004098 ORTHO05D005215 4.4e-176 622.5 1250 43.4
Mapoly0064s0022 Marchantia polymorpha HOM05D004098 ORTHO05D005215 3.9e-169 599.4 769 55.8
Pp3c14_5170 Physcomitrium patens HOM05D004098 ORTHO05D005215 5.7e-168 595.5 780 56.4
Zm00001eb199560 Zea mays HOM05D004098 ORTHO05D005215 1.3e-167 594.3 763 58.7
Os08g0500100 Oryza sativa ssp. japonica HOM05D004098 ORTHO05D005215 2.2e-167 593.6 762 58.0
Zm00001eb034080 Zea mays HOM05D004098 ORTHO05D005215 7.0e-166 588.6 762 58.1
HPP92_017855 Vanilla planifolia HOM05D004098 ORTHO05D005215 2.3e-161 573.5 452 65.9
SMO361G0081 Selaginella moellendorffii HOM05D004098 ORTHO05D005215 6.8e-153 545.4 773 53.8
vmacro09792 Vaccinium macrocarpon HOM05D004098 ORTHO05D005215 3.4e-144 516.5 543 53.8
SEGI_20896 Sequoiadendron giganteum HOM05D004098 ORTHO05D005215 7.8e-133 478.8 443 58.7
CBR_g45681 Chara braunii HOM05D004098 ORTHO05D005215 7.6e-112 409.1 622 43.6
Ah.04g164860 Amaranthus hybridus HOM05D004098 ORTHO05D005215 4.2e-110 403.3 356 83.4
AUR62017764 Chenopodium quinoa HOM05D004098 ORTHO05D005215 1.0e-108 398.7 388 79.6
CDE05G2641 Ceratophyllum demersum HOM05D004098 ORTHO05D005215 3.3e-107 393.7 363 81.8
AUR62017765 Chenopodium quinoa HOM05D004098 ORTHO05D005215 2.9e-103 380.6 396 53.0
vmacro09791 Vaccinium macrocarpon HOM05D004098 ORTHO05D005215 4.8e-98 363.2 304 90.8
CDE05G2368 Ceratophyllum demersum HOM05D004098 ORTHO05D005215 7.1e-94 349.4 342 59.9
Ah.04g164850 Amaranthus hybridus HOM05D000499 ORTHO05D002036 3.9e-92 343.6 393 51.4
Cre14.g616750 Chlamydomonas reinhardtii HOM05D004098 ORTHO05D005215 2.6e-72 277.7 755 32.2
Cpa.g.sc12.52 Carica papaya HOM05D004098 ORTHO05D005215 4.5e-72 276.9 209 64.1
Gohir.A13G000950 Gossypium hirsutum HOM05D004098 ORTHO05D005215 7.2e-70 269.6 300 53.0
BolC2t07653H Brassica oleracea HOM05D004098 ORTHO05D005215 7.9e-69 266.2 491 36.9
PRCOL_00000784 Prasinoderma coloniale HOM05D004098 ORTHO05D005215 1.5e-64 251.9 713 31.6
MCO05G026 Micromonas commoda HOM05D004098 ORTHO05D005215 1.0e-63 249.2 866 37.5
Gohir.A04G000600 Gossypium hirsutum HOM05D004098 ORTHO05D005215 4.2e-62 243.8 165 74.5
Cpa.g.sc12.51 Carica papaya HOM05D004098 ORTHO05D005215 3.8e-55 220.7 149 74.5
C02p15370 Brassica napus HOM05D004098 ORTHO05D005215 1.2e-53 215.7 476 33.0
Gohir.A03G000002 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.9e-46 191.8 229 48.9
Gorai.009G455200 Gossypium raimondii HOM05D004098 ORTHO05D005215 2.8e-42 177.9 229 48.0
Gohir.A06G201500 Gossypium hirsutum HOM05D004098 ORTHO05D005215 5.0e-39 167.2 98 82.7
Gohir.A12G000850 Gossypium hirsutum HOM05D004098 ORTHO05D005215 6.5e-39 166.8 229 45.4
Gohir.1Z049490 Gossypium hirsutum HOM05D004098 ORTHO05D005215 2.7e-37 161.4 92 83.7
Gohir.A08G253600 Gossypium hirsutum HOM05D004098 ORTHO05D005215 3.7e-34 151.0 88 81.8
Gohir.A01G000401 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.0e-31 142.9 78 85.9
Lsat_1_v5_gn_6_79681 Lactuca sativa HOM05D004098 ORTHO05D005215 2.9e-31 141.4 149 53.7
Gohir.A11G000300 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.1e-30 139.4 84 81.0
Lsat_1_v5_gn_8_153381 Lactuca sativa HOM05D004098 ORTHO05D005215 7.2e-30 136.7 147 53.7
Lsat_1_v5_gn_8_35540 Lactuca sativa HOM05D004098 ORTHO05D005215 4.7e-29 134.0 166 49.4
Gohir.1Z049406 Gossypium hirsutum HOM05D004098 ORTHO05D005215 9.8e-27 126.3 102 66.7
Gohir.A03G000007 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.7e-26 125.6 67 83.6
Haze_09931 Corylus avellana HOM05D000997 ORTHO05D000828 8.3e-26 123.2 110 61.8
A02p09220 Brassica napus HOM05D004098 ORTHO05D005215 7.0e-25 120.2 93 66.7
MBI15_g32219_MAGBIO Magnolia biondii HOM05D004098 ORTHO05D005215 2.7e-24 118.2 124 54.8
Gohir.A05G415701 Gossypium hirsutum HOM05D002376 ORTHO05D004654 5.0e-23 114.0 69 78.3
Cpa.g.sc12.49 Carica papaya HOM05D004098 ORTHO05D021823 6.6e-23 113.6 155 96.1
Gohir.A12G000500 Gossypium hirsutum HOM05D004741 ORTHO05D005454 1.9e-22 112.1 61 85.2
Gohir.D03G178425 Gossypium hirsutum HOM05D004098 ORTHO05D005215 4.3e-22 110.9 61 83.6
Hma1.2p1_0321F.1_g124420 Hydrangea macrophylla HOM05D004098 ORTHO05D005215 5.6e-22 110.5 164 45.1
HPP92_017856 Vanilla planifolia HOM05D004098 ORTHO05D005215 7.3e-22 110.2 145 46.9
Lsat_1_v5_gn_2_71300 Lactuca sativa HOM05D004098 ORTHO05D005215 9.5e-22 109.8 106 60.4
Gohir.A07G135000 Gossypium hirsutum HOM05D004098 ORTHO05D005215 3.6e-21 107.8 60 86.7
TPR.G8441 Trifolium pratense HOM05D004098 ORTHO05D021823 1.2e-19 102.8 154 92.2
Lsat_1_v5_gn_3_67900 Lactuca sativa HOM05D004098 ORTHO05D005215 3.3e-14 84.7 182 35.2
Gohir.A05G415601 Gossypium hirsutum HOM05D004098 ORTHO05D005215 2.3e-12 78.6 80 53.8
Gohir.A03G081400 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.2e-11 76.3 60 68.3
Cfa024256 Carpinus fangiana HOM05D032100 ORTHO05D126575 4.9e-10 70.9 232 27.6
Gohir.1Z049608 Gossypium hirsutum HOM05D004098 ORTHO05D005215 1.9e-09 68.9 53 60.4
SEGI_01359 Sequoiadendron giganteum HOM05D004098 ORTHO05D005215 3.2e-09 68.2 114 41.2
Lsat_1_v5_gn_9_105500 Lactuca sativa HOM05D004098 ORTHO05D001482 3.5e-08 64.7 92 43.5
Hund01805 Selenicereus undatus HOM05D004098 ORTHO05D005215 1.0e-07 63.2 43 69.8
Gohir.A06G201400 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.3e-07 62.8 31 93.5
Gohir.A08G000028 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.7e-07 62.4 30 96.7
Gohir.A09G249700 Gossypium hirsutum HOM05D004098 ORTHO05D021823 5.1e-07 60.8 31 90.3
BcaB05g22258 Brassica carinata HOM05D004098 ORTHO05D021823 4.3e-06 57.8 31 80.6
Gohir.1Z049433 Gossypium hirsutum HOM05D004098 ORTHO05D021823 4.3e-06 57.8 31 87.1


User provided reference genes

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