Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02166 Aquilegia oxysepala HOM05D000782 ORTHO05D000571 7.1e-150 533.9 263 100.0
Ciclev10002580m.g Citrus clementina HOM05D000782 ORTHO05D000571 1.9e-25 120.6 152 44.7
Dinv12248 Davidia involucrata HOM05D000782 ORTHO05D000571 2.4e-25 120.2 151 45.7
TAR623G1242 Trochodendron aralioides HOM05D000782 ORTHO05D000571 4.2e-25 119.4 150 44.0
TAR623G0287 Trochodendron aralioides HOM05D000782 ORTHO05D000571 9.3e-25 118.2 149 44.3
Eucgr.K01367 Eucalyptus grandis HOM05D000782 ORTHO05D000571 1.6e-24 117.5 154 43.5
TAR369G0987 Trochodendron aralioides HOM05D000782 ORTHO05D000571 4.6e-24 115.9 154 42.9
Duzib168G2101 Durio zibethinus HOM05D000782 ORTHO05D000571 6.0e-24 115.5 150 46.0
MD11G1060400 Malus domestica HOM05D000782 ORTHO05D000571 1.0e-23 114.8 152 40.1
Thecc.09G359700 Theobroma cacao HOM05D000782 ORTHO05D000571 1.7e-23 114.0 150 44.0
Lj2A1095G46 Lonicera japonica HOM05D000782 ORTHO05D000571 5.1e-23 112.5 154 42.2
Atru.chr1.2094 Acer truncatum HOM05D000782 ORTHO05D000571 2.5e-22 110.2 148 40.5
MD03G1058200 Malus domestica HOM05D000782 ORTHO05D000571 3.3e-22 109.8 152 38.8
QL01p025713 Quercus lobata HOM05D000782 ORTHO05D000571 3.3e-22 109.8 150 44.7
Gohir.D08G221000 Gossypium hirsutum HOM05D000782 ORTHO05D000571 7.3e-22 108.6 153 43.1
Gorai.004G234700 Gossypium raimondii HOM05D000782 ORTHO05D000571 7.3e-22 108.6 153 43.1
MD17G1185800 Malus domestica HOM05D000782 ORTHO05D000571 7.3e-22 108.6 149 39.6
Hma1.2p1_1421F.1_g282460 Hydrangea macrophylla HOM05D000782 ORTHO05D000571 1.3e-21 107.8 151 40.4
Prupe.6G045600 Prunus persica HOM05D000782 ORTHO05D000571 2.1e-21 107.1 152 36.8
Gohir.A03G024700 Gossypium hirsutum HOM05D000782 ORTHO05D000571 2.8e-21 106.7 149 43.0
RcHm_v2.0_Chr5g0071971 Rosa chinensis HOM05D000782 ORTHO05D000571 2.8e-21 106.7 152 37.5
Gohir.A08G203700 Gossypium hirsutum HOM05D000782 ORTHO05D000571 3.6e-21 106.3 151 42.4
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 4.8e-21 105.9 151 39.7
Cpa.g.sc2.336 Carica papaya HOM05D000782 ORTHO05D000571 4.8e-21 105.9 154 40.3
QL04p095962 Quercus lobata HOM05D000782 ORTHO05D000571 8.1e-21 105.1 150 43.3
QL04p095983 Quercus lobata HOM05D000782 ORTHO05D000571 1.1e-20 104.8 150 43.3
Actinidia32599 Actinidia chinensis HOM05D000782 ORTHO05D000571 1.4e-20 104.4 152 41.4
Gohir.D03G143800 Gossypium hirsutum HOM05D000782 ORTHO05D000571 1.4e-20 104.4 193 38.9
COL.COLO4_11173 Corchorus olitorius HOM05D000782 ORTHO05D000571 4.0e-20 102.8 152 39.5
FAN25G1963 Fragaria x ananassa HOM05D000001 ORTHO05D012572 4.0e-20 102.8 153 37.9
Sabra19G0130500 Salix brachista HOM05D000782 ORTHO05D000571 4.0e-20 102.8 150 40.7
ClCG08G003160 Citrullus lanatus HOM05D000782 ORTHO05D000571 6.9e-20 102.1 158 40.5
SalBow2G3499 Salvia bowleyana HOM05D000782 ORTHO05D000571 6.9e-20 102.1 151 39.7
CiPaw.14G053200 Carya illinoinensis HOM05D000782 ORTHO05D000571 1.2e-19 101.3 149 41.6
FAN21G0593 Fragaria x ananassa HOM05D000782 ORTHO05D000571 1.2e-19 101.3 157 36.9
Gorai.003G151100 Gossypium raimondii HOM05D000782 ORTHO05D000571 1.5e-19 100.9 193 38.3
FvH4_3g39960 Fragaria vesca HOM05D000782 ORTHO05D000571 2.0e-19 100.5 153 37.3
FAN16G3647 Fragaria x ananassa HOM05D000001 ORTHO05D012572 2.0e-19 100.5 153 37.3
vmacro02905 Vaccinium macrocarpon HOM05D000782 ORTHO05D000571 2.0e-19 100.5 152 38.8
Phvul.008G250800 Phaseolus vulgaris HOM05D000782 ORTHO05D000571 2.6e-19 100.1 154 40.3
Rhsim13G0062600 Rhododendron simsii HOM05D000782 ORTHO05D000571 2.6e-19 100.1 152 38.8
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 3.4e-19 99.8 154 39.6
MBI15_g20019_MAGBIO Magnolia biondii HOM05D000782 ORTHO05D000571 5.8e-19 99.0 150 42.7
GSVIVG01024611001 Vitis vinifera HOM05D000001 ORTHO05D012572 7.6e-19 98.6 152 38.8
Haze_24431 Corylus avellana HOM05D000782 ORTHO05D000571 9.9e-19 98.2 150 41.3
PGSC0003DMG400030460 Solanum tuberosum HOM05D000782 ORTHO05D000571 9.9e-19 98.2 152 35.5
Glyma.14G200600 Glycine max HOM05D000782 ORTHO05D000571 2.2e-18 97.1 154 39.0
TWI79G1409 Tripterygium wilfordii HOM05D000782 ORTHO05D000571 2.2e-18 97.1 169 36.1
CANSAT54G1735 Cannabis sativa HOM05D000782 ORTHO05D000571 2.9e-18 96.7 147 38.1
CAN.G1095.28 Capsicum annuum HOM05D000782 ORTHO05D000571 1.4e-17 94.4 152 34.9
Glyma.02G233000 Glycine max HOM05D000782 ORTHO05D000571 1.4e-17 94.4 154 39.6
Manes.18G126600 Manihot esculenta HOM05D000782 ORTHO05D000571 1.4e-17 94.4 151 37.1
Solyc06g082380.3 Solanum lycopersicum HOM05D000782 ORTHO05D000571 2.4e-17 93.6 152 34.2
Sopen06g033770 Solanum pennellii HOM05D000782 ORTHO05D000571 2.4e-17 93.6 152 34.2
CsaV3_7G022830 Cucumis sativus L. HOM05D000782 ORTHO05D000571 4.2e-17 92.8 150 39.3
Oeu050028.1 Olea europaea HOM05D000782 ORTHO05D000571 4.2e-17 92.8 153 36.6
Migut.N00751 Erythranthe guttata HOM05D000782 ORTHO05D000571 5.4e-17 92.4 148 36.5
MELO3C024977.2 Cucumis melo HOM05D000782 ORTHO05D000571 7.1e-17 92.0 156 35.9
Lsat_1_v5_gn_8_108720 Lactuca sativa HOM05D000782 ORTHO05D000571 7.1e-17 92.0 156 36.5
Sabra19G0124100 Salix brachista HOM05D000782 ORTHO05D000571 9.3e-17 91.7 175 35.4
Thhalv10017277m.g Eutrema salsugineum HOM05D000782 ORTHO05D000571 1.6e-16 90.9 152 40.1
Aa31LG5G6450 Aethionema arabicum HOM05D002411 ORTHO05D002564 3.5e-16 89.7 151 39.7
Sp4g12850 Schrenkiella parvula HOM05D000782 ORTHO05D000571 3.5e-16 89.7 151 39.1
Sed0021709 Sechium edule HOM05D000782 ORTHO05D000571 3.5e-16 89.7 158 36.1
AL4G25120 Arabidopsis lyrata HOM05D000782 ORTHO05D000571 6.0e-16 89.0 151 38.4
ClCG03G000180 Citrullus lanatus HOM05D000782 ORTHO05D000571 7.9e-16 88.6 189 32.3
VMungo0647G1733 Vigna mungo HOM05D000782 ORTHO05D000571 7.9e-16 88.6 154 37.7
TPR.G25342 Trifolium pratense HOM05D000782 ORTHO05D000571 1.3e-15 87.8 151 37.1
CiPaw.13G067500 Carya illinoinensis HOM05D000782 ORTHO05D000571 1.8e-15 87.4 148 37.2
Cc01_g15010 Coffea canephora HOM05D000782 ORTHO05D000571 1.8e-15 87.4 152 32.9
AT2G30270 Arabidopsis thaliana HOM05D000782 ORTHO05D000571 2.3e-15 87.0 151 37.7
Psat0s2794g0120 Pisum sativum HOM05D000782 ORTHO05D000571 2.3e-15 87.0 148 37.2
Nn2g11061 Nelumbo nucifera HOM05D000782 ORTHO05D000571 3.0e-15 86.7 160 33.1
ECA236G0449 Erigeron canadensis HOM05D000782 ORTHO05D000571 5.1e-15 85.9 150 37.3
A03p16910 Brassica napus HOM05D000782 ORTHO05D000571 6.7e-15 85.5 154 36.4
BraA03t10980Z Brassica rapa HOM05D000782 ORTHO05D000571 6.7e-15 85.5 154 36.4
CARHR123590 Cardamine hirsuta HOM05D000782 ORTHO05D000571 8.7e-15 85.1 151 38.4
PSO170G6702 Papaver somniferum HOM05D000782 ORTHO05D000571 8.7e-15 85.1 155 36.1
Ah.08g215420 Amaranthus hybridus HOM05D000782 ORTHO05D000571 1.1e-14 84.7 200 32.0
Lalb_Chr10g0103661 Lupinus albus HOM05D000782 ORTHO05D000571 1.1e-14 84.7 145 37.2
Medtr5g074550 Medicago truncatula HOM05D000782 ORTHO05D000571 1.1e-14 84.7 149 36.9
HanXRQChr11g0339921 Helianthus annuus HOM05D000782 ORTHO05D000571 1.5e-14 84.3 158 36.7
Sc21g0004900 Simmondsia chinensis HOM05D000782 ORTHO05D000571 1.5e-14 84.3 151 38.4
BcaC01g06019 Brassica carinata HOM05D000782 ORTHO05D000571 1.9e-14 84.0 151 37.1
C03p19910 Brassica napus HOM05D000782 ORTHO05D000571 4.3e-14 82.8 151 37.1
BolC3t14370H Brassica oleracea HOM05D000782 ORTHO05D000571 4.3e-14 82.8 151 37.1
Ca_05681_v3 Cicer arietinum L. HOM05D000782 ORTHO05D000571 4.3e-14 82.8 156 36.5
HPP92_001136 Vanilla planifolia HOM05D000782 ORTHO05D000571 5.6e-14 82.4 149 34.2
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 7.4e-14 82.0 203 31.0
DCAR_023953 Daucus carota HOM05D000782 ORTHO05D000571 9.6e-14 81.6 157 31.2
Carub.0004s1143 Capsella rubella HOM05D000782 ORTHO05D000571 1.3e-13 81.3 151 36.4
AUR62009715 Chenopodium quinoa HOM05D000782 ORTHO05D000571 6.2e-13 79.0 203 32.0
THA.LOC104800764 Tarenaya hassleriana HOM05D000782 ORTHO05D000571 2.4e-12 77.0 151 35.8
EL10Ac7g15871 Beta vulgaris HOM05D000782 ORTHO05D000571 4.0e-12 76.3 197 29.4
Medtr5g074560 Medicago truncatula HOM05D000782 ORTHO05D000571 1.2e-11 74.7 148 32.4
LjContig00141g0026997 Lotus japonicus HOM05D000782 ORTHO05D000571 5.8e-11 72.4 157 31.2
Potri.019G126300 Populus trichocarpa HOM05D000782 ORTHO05D000571 9.9e-11 71.6 174 32.2
SGA_v2.0_scaffold120G32965 Striga asiatica HOM05D000782 ORTHO05D000571 3.8e-10 69.7 197 25.4
MSTRG.12694 Avicennia marina HOM05D000782 ORTHO05D000571 4.9e-10 69.3 152 27.0
SEGI_32147 Sequoiadendron giganteum HOM05D000782 ORTHO05D000571 4.9e-10 69.3 152 30.3
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 1.4e-09 67.8 172 27.9
PSO017G2384 Papaver somniferum HOM05D000782 ORTHO05D000571 2.4e-09 67.0 154 30.5
TAR623G0969 Trochodendron aralioides HOM05D000782 ORTHO05D000571 2.4e-09 67.0 69 47.8
DCAR_028903 Daucus carota HOM05D000782 ORTHO05D000571 3.2e-09 66.6 148 31.8
Nitab4.5_0003270g0030 Nicotiana tabacum HOM05D000782 ORTHO05D000571 7.1e-09 65.5 131 31.3
SalBow6G0271 Salvia bowleyana HOM05D004269 ORTHO05D000571 7.1e-09 65.5 69 46.4
ATR0681G158 Amborella trichopoda HOM05D000782 ORTHO05D000571 2.7e-08 63.5 168 28.6
DCAR_028901 Daucus carota HOM05D000782 ORTHO05D000571 6.0e-08 62.4 148 29.7
MD12G1183400 Malus domestica HOM05D000782 ORTHO05D000571 1.8e-07 60.8 158 28.5
CAN.G48.38 Capsicum annuum HOM05D000782 ORTHO05D000571 3.9e-07 59.7 70 40.0
MBI15_g43140_MAGBIO Magnolia biondii HOM05D000782 ORTHO05D000571 3.9e-07 59.7 153 28.8
SHI19227 Sapria himalayana HOM05D000782 ORTHO05D000571 5.1e-07 59.3 77 41.6
CDE06G0912 Ceratophyllum demersum HOM05D000782 ORTHO05D000571 2.5e-06 57.0 169 29.6
Rhsim05G0227900 Rhododendron simsii HOM05D000782 ORTHO05D000571 2.5e-06 57.0 206 28.6
MD12G1182900 Malus domestica HOM05D000782 ORTHO05D000571 4.3e-06 56.2 147 29.9
Peaxi162Scf00390g00530 Petunia axillaris HOM05D000782 ORTHO05D000571 4.3e-06 56.2 138 29.7
SEGI_15211 Sequoiadendron giganteum HOM05D000551 ORTHO05D000571 5.6e-06 55.8 162 28.4
Zm00001eb286650 Zea mays HOM05D000782 ORTHO05D000571 5.6e-06 55.8 91 37.4


User provided reference genes

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