Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02154 Aquilegia oxysepala HOM05D006271 ORTHO05D008237 2.4e-177 625.5 355 100.0
TAR369G0029 Trochodendron aralioides HOM05D006271 ORTHO05D008237 4.7e-88 328.9 357 54.9
GSVIVG01024608001 Vitis vinifera HOM05D006271 ORTHO05D008237 4.5e-83 312.4 285 61.1
TAR633G1937 Trochodendron aralioides HOM05D006271 ORTHO05D008237 4.2e-81 305.8 312 55.8
Hma1.2p1_0613F.1_g189190 Hydrangea macrophylla HOM05D006271 ORTHO05D008237 1.3e-77 294.3 292 57.5
PSO170G5827 Papaver somniferum HOM05D006271 ORTHO05D008237 4.8e-77 292.4 294 56.1
Nitab4.5_0003270g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 2.4e-76 290.0 357 54.3
Cfa011797 Carpinus fangiana HOM05D006271 ORTHO05D008237 2.9e-74 283.1 277 59.2
Glyma.19G024000 Glycine max HOM05D006271 ORTHO05D008237 2.9e-74 283.1 285 55.1
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 3.8e-74 282.7 288 57.3
Ciclev10001595m.g Citrus clementina HOM05D006271 ORTHO05D008237 5.0e-74 282.3 289 58.1
CSS0050408 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 1.9e-73 280.4 291 56.4
PSO017G5241 Papaver somniferum HOM05D006271 ORTHO05D008237 3.2e-73 279.6 293 53.6
MD03G1058300 Malus domestica HOM05D006271 ORTHO05D008237 7.2e-73 278.5 297 54.9
MBI15_g26246_MAGBIO Magnolia biondii HOM05D006271 ORTHO05D008237 6.1e-72 275.4 310 54.5
RcHm_v2.0_Chr6g0268191 Rosa chinensis HOM05D006271 ORTHO05D008237 6.1e-72 275.4 287 55.1
Nitab4.5_0002768g0040 Nicotiana tabacum HOM05D006271 ORTHO05D008237 3.0e-71 273.1 357 52.4
Sopen06g033780 Solanum pennellii HOM05D006271 ORTHO05D008237 3.0e-71 273.1 283 57.2
TWI79G1094 Tripterygium wilfordii HOM05D006271 ORTHO05D008237 3.0e-71 273.1 293 56.7
CiPaw.13G067000 Carya illinoinensis HOM05D006271 ORTHO05D008237 4.0e-71 272.7 293 55.3
Cpa.g.c32708 Carica papaya HOM05D006271 ORTHO05D008237 5.2e-71 272.3 291 54.3
MD11G1060500 Malus domestica HOM05D006271 ORTHO05D008237 5.2e-71 272.3 286 54.5
Lsat_1_v5_gn_9_14460 Lactuca sativa HOM05D006271 ORTHO05D008237 8.8e-71 271.6 294 55.1
THA.LOC104800763 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 8.8e-71 271.6 288 55.2
PGSC0003DMG400030380 Solanum tuberosum HOM05D006271 ORTHO05D008237 1.5e-70 270.8 302 55.0
Sc21g0004890 Simmondsia chinensis HOM05D006271 ORTHO05D008237 3.4e-70 269.6 290 54.8
Duzib168G1576 Durio zibethinus HOM05D006271 ORTHO05D008237 4.4e-70 269.2 295 54.6
arahy.Tifrunner.gnm1.ann1.0DE1FL Arachis hypogaea HOM05D006271 ORTHO05D008237 5.7e-70 268.9 279 54.5
VMungo0464G0054 Vigna mungo HOM05D006271 ORTHO05D008237 7.5e-70 268.5 273 54.6
Ca_26670_v3 Cicer arietinum L. HOM05D006271 ORTHO05D008237 1.7e-69 267.3 274 54.7
arahy.Tifrunner.gnm1.ann1.4PY88X Arachis hypogaea HOM05D006271 ORTHO05D008237 3.7e-69 266.2 272 54.8
Eucgr.K01366 Eucalyptus grandis HOM05D006271 ORTHO05D008237 8.3e-69 265.0 273 55.3
HanXRQChr08g0228551 Helianthus annuus HOM05D006271 ORTHO05D008237 1.1e-68 264.6 291 54.6
Atru.chr5.2170 Acer truncatum HOM05D006271 ORTHO05D008237 1.4e-68 264.2 263 57.4
FAN13G0829 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.4e-68 264.2 294 54.4
CAN.G1095.29 Capsicum annuum HOM05D006271 ORTHO05D008237 1.8e-68 263.8 273 57.1
Cc01_g15040 Coffea canephora HOM05D006271 ORTHO05D008237 2.4e-68 263.5 316 53.2
FAN18G4385 Fragaria x ananassa HOM05D006271 ORTHO05D008237 5.4e-68 262.3 294 54.1
CsaV3_7G022840 Cucumis sativus L. HOM05D006271 ORTHO05D008237 1.2e-67 261.2 286 53.8
Phvul.008G153700 Phaseolus vulgaris HOM05D006271 ORTHO05D008237 2.0e-67 260.4 260 56.2
ClCG08G003170 Citrullus lanatus HOM05D006271 ORTHO05D008237 4.5e-67 259.2 311 51.8
COL.COLO4_11178 Corchorus olitorius HOM05D006271 ORTHO05D008237 4.5e-67 259.2 288 54.9
DCAR_018792 Daucus carota HOM05D006271 ORTHO05D008237 2.3e-66 256.9 284 52.5
Potri.019G126500 Populus trichocarpa HOM05D006271 ORTHO05D008237 3.8e-66 256.1 296 51.4
CSS0007493 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 5.0e-66 255.8 276 54.7
Prupe.6G045300 Prunus persica HOM05D006271 ORTHO05D008237 8.6e-66 255.0 287 53.0
FAN04G1993 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.5e-65 254.2 323 50.5
Oeu032478.1 Olea europaea HOM05D006271 ORTHO05D008237 2.5e-65 253.4 300 52.3
Rhsim13G0062500 Rhododendron simsii HOM05D006271 ORTHO05D008237 3.3e-65 253.1 288 52.1
Medtr7g033700 Medicago truncatula HOM05D006271 ORTHO05D008237 5.5e-65 252.3 339 47.2
CANSAT11G2184 Cannabis sativa HOM05D006271 ORTHO05D008237 1.6e-64 250.8 287 50.2
Hund18965 Selenicereus undatus HOM05D006271 ORTHO05D008237 3.6e-64 249.6 284 52.1
Psat6g224880 Pisum sativum HOM05D006271 ORTHO05D008237 4.7e-64 249.2 305 50.2
Aa31LG5G6440 Aethionema arabicum HOM05D006271 ORTHO05D008237 6.1e-64 248.8 289 50.5
ECA247G1693 Erigeron canadensis HOM05D006271 ORTHO05D008237 6.1e-64 248.8 276 52.2
FAN08G2456 Fragaria x ananassa HOM05D006271 ORTHO05D008237 1.0e-63 248.1 323 50.2
EL10Ac7g15870 Beta vulgaris HOM05D006271 ORTHO05D008237 1.4e-63 247.7 293 49.8
A05p15180 Brassica napus HOM05D006271 ORTHO05D008237 2.3e-63 246.9 290 50.3
PGR004G1333 Punica granatum HOM05D006271 ORTHO05D008237 8.9e-63 245.0 278 52.5
Thhalv10016851m.g Eutrema salsugineum HOM05D006271 ORTHO05D008237 1.5e-62 244.2 287 47.7
Sabra19G0124300 Salix brachista HOM05D006271 ORTHO05D008237 1.5e-62 244.2 287 51.2
BraA05t20437Z Brassica rapa HOM05D006271 ORTHO05D008237 9.8e-62 241.5 294 49.7
Sed0013584 Sechium edule HOM05D006271 ORTHO05D008237 3.7e-61 239.6 277 51.3
Sabra19G0130300 Salix brachista HOM05D006271 ORTHO05D008237 8.3e-61 238.4 299 50.5
Manes.12G056300 Manihot esculenta HOM05D006271 ORTHO05D008237 1.1e-60 238.0 295 51.2
Actinidia23186 Actinidia chinensis HOM05D006271 ORTHO05D008237 1.8e-60 237.3 283 50.2
Lalb_Chr22g0360771 Lupinus albus HOM05D006271 ORTHO05D008237 1.8e-60 237.3 284 50.0
TPR.G1139 Trifolium pratense HOM05D006271 ORTHO05D008237 2.4e-60 236.9 261 53.3
PSO339G2991 Papaver somniferum HOM05D006271 ORTHO05D008237 5.4e-60 235.7 334 45.2
Sp4g12860 Schrenkiella parvula HOM05D006271 ORTHO05D008237 1.6e-59 234.2 287 46.3
CARHR123600 Cardamine hirsuta HOM05D006271 ORTHO05D008237 3.5e-59 233.0 295 46.8
Gorai.003G151300 Gossypium raimondii HOM05D006271 ORTHO05D008237 3.5e-59 233.0 274 51.5
Medtr8g063090 Medicago truncatula HOM05D006271 ORTHO05D008237 3.5e-59 233.0 268 50.7
Lj1g0015465 Lotus japonicus HOM05D006271 ORTHO05D008237 7.8e-59 231.9 273 50.5
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.0e-58 231.5 331 46.8
AT2G30280 Arabidopsis thaliana HOM05D006271 ORTHO05D008237 1.3e-58 231.1 291 47.1
Peaxi162Scf00390g00528 Petunia axillaris HOM05D006271 ORTHO05D008237 2.3e-58 230.3 282 50.4
Thecc.09G360000 Theobroma cacao HOM05D006271 ORTHO05D008237 2.3e-58 230.3 290 49.7
Dinv12252 Davidia involucrata HOM05D006271 ORTHO05D008237 3.9e-58 229.6 222 57.2
Gohir.D03G144000 Gossypium hirsutum HOM05D006271 ORTHO05D008237 5.0e-58 229.2 270 51.9
Carub.0008s0813 Capsella rubella HOM05D006271 ORTHO05D008237 6.6e-58 228.8 290 46.6
Gohir.A03G024500 Gossypium hirsutum HOM05D006271 ORTHO05D008237 1.1e-57 228.0 270 52.2
BcaB02g10312 Brassica carinata HOM05D006271 ORTHO05D008237 3.3e-57 226.5 278 46.8
SalBow2G1290 Salvia bowleyana HOM05D006271 ORTHO05D008237 5.6e-57 225.7 319 43.3
AL4G25130 Arabidopsis lyrata HOM05D006271 ORTHO05D008237 9.5e-57 224.9 291 46.4
CSS0039557 Camellia sinensis var. sinensis HOM05D006271 ORTHO05D008237 9.5e-57 224.9 319 48.6
BcaC02g11116 Brassica carinata HOM05D006271 ORTHO05D008237 2.3e-55 220.3 272 47.8
THA.LOC104800777 Tarenaya hassleriana HOM05D006271 ORTHO05D008237 6.8e-55 218.8 277 50.2
Os12g0110300 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 8.9e-55 218.4 281 48.4
unitig_60.g25562 Utricularia gibba HOM05D006271 ORTHO05D008237 8.9e-55 218.4 276 47.5
FvH4_5g27270 Fragaria vesca HOM05D006271 ORTHO05D008237 1.5e-54 217.6 227 55.9
Migut.N00750 Erythranthe guttata HOM05D006271 ORTHO05D008237 4.4e-54 216.1 284 46.8
Os11g0110066 Oryza sativa ssp. japonica HOM05D006271 ORTHO05D008237 3.7e-53 213.0 281 47.3
BolC4t23562H Brassica oleracea HOM05D006271 ORTHO05D008237 4.9e-53 212.6 280 46.4
HPP92_015428 Vanilla planifolia HOM05D006271 ORTHO05D008237 1.1e-52 211.5 278 43.9
SGA_v2.0_scaffold77G25374 Striga asiatica HOM05D006271 ORTHO05D008237 1.4e-52 211.1 247 48.6
Nn2g11075 Nelumbo nucifera HOM05D006271 ORTHO05D008237 7.0e-52 208.8 273 47.3
vmacro02904 Vaccinium macrocarpon HOM05D006271 ORTHO05D008237 2.7e-51 206.8 286 46.2
QL01p025615 Quercus lobata HOM05D006271 ORTHO05D008237 1.9e-49 200.7 498 33.3
AUR62036230 Chenopodium quinoa HOM05D006271 ORTHO05D008237 4.3e-49 199.5 227 51.1
AUR62009716 Chenopodium quinoa HOM05D006271 ORTHO05D008237 8.1e-48 195.3 363 38.8
Dinv44551 Davidia involucrata HOM05D006271 ORTHO05D008237 8.9e-47 191.8 174 57.5
Medtr7g033685 Medicago truncatula HOM05D006271 ORTHO05D008237 4.4e-46 189.5 260 46.9
CDE04G1879 Ceratophyllum demersum HOM05D006271 ORTHO05D008237 2.2e-45 187.2 252 46.0
C04p20240 Brassica napus HOM05D006271 ORTHO05D008237 5.4e-44 182.6 239 46.0
Lj1g0018317 Lotus japonicus HOM05D006271 ORTHO05D008237 1.6e-43 181.0 341 39.3
TPR.G1080 Trifolium pratense HOM05D006271 ORTHO05D008237 3.7e-37 159.8 257 40.9
QL01p025639 Quercus lobata HOM05D006271 ORTHO05D008237 1.3e-34 151.4 159 53.5
Ah.07g202380 Amaranthus hybridus HOM05D006271 ORTHO05D008237 2.5e-33 147.1 215 43.3
Zm00001eb404980 Zea mays HOM05D006271 ORTHO05D008237 2.4e-31 140.6 194 44.8
AagrBONN_evm.TU.Sc2ySwM_344.4002 Anthoceros agrestis HOM05D006271 ORTHO05D008237 3.1e-31 140.2 292 38.7
SEGI_17267 Sequoiadendron giganteum HOM05D006271 ORTHO05D008237 4.0e-31 139.8 254 35.8
Pp3c12_13690 Physcomitrium patens HOM05D006271 ORTHO05D008237 3.0e-26 123.6 276 34.4
unitig_60.g25741 Utricularia gibba HOM05D006271 ORTHO05D008237 1.9e-25 120.9 249 34.1
PSO384G0354 Papaver somniferum HOM05D006271 ORTHO05D008237 2.1e-24 117.5 93 65.6
Mapoly0055s0007 Marchantia polymorpha HOM05D006271 ORTHO05D008237 2.4e-23 114.0 258 32.6
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 2.7e-19 100.5 88 63.6
SHI19233 Sapria himalayana HOM05D006271 ORTHO05D008237 2.3e-18 97.4 184 39.1
PSO017G3993 Papaver somniferum HOM05D006271 ORTHO05D008237 7.6e-14 82.4 211 34.1
PSO170G2099 Papaver somniferum HOM05D006271 ORTHO05D008237 7.6e-14 82.4 211 34.6
BolC4t27428H Brassica oleracea HOM05D006271 ORTHO05D023853 4.8e-08 63.2 251 29.5
BcaB06g28355 Brassica carinata HOM05D006271 ORTHO05D008237 3.1e-07 60.5 103 37.9
C04p59170 Brassica napus HOM05D006271 ORTHO05D023853 5.3e-07 59.7 249 28.1


User provided reference genes

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