Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G02135 Aquilegia oxysepala HOM05D001601 ORTHO05D006936 4.7e-88 327.8 162 100.0
Aqoxy4G01891 Aquilegia oxysepala HOM05D001601 ORTHO05D006936 2.1e-43 179.5 100 89.0
Hma1.2p1_0809F.1_g221820 Hydrangea macrophylla HOM05D001601 ORTHO05D006936 2.2e-16 89.7 101 49.5
TAR626G1124 Trochodendron aralioides HOM05D001601 ORTHO05D006936 1.4e-15 87.0 99 45.5
Nn1g06916 Nelumbo nucifera HOM05D001601 ORTHO05D006936 7.0e-15 84.7 107 43.9
Cfa000292 Carpinus fangiana HOM05D001601 ORTHO05D006936 3.5e-14 82.4 100 45.0
Cpa.g.sc871.3 Carica papaya HOM05D001601 ORTHO05D006936 4.5e-14 82.0 100 44.0
CiPaw.09G153700 Carya illinoinensis HOM05D001601 ORTHO05D006936 4.5e-14 82.0 99 46.5
PSO478G3808 Papaver somniferum HOM05D001601 ORTHO05D006936 4.5e-14 82.0 102 44.1
Aqoxy4G01890 Aquilegia oxysepala HOM05D001601 ORTHO05D006936 5.9e-14 81.6 109 41.3
Haze_06641 Corylus avellana HOM05D001601 ORTHO05D006936 7.7e-14 81.3 98 45.9
Haze_06652 Corylus avellana HOM05D001601 ORTHO05D006936 7.7e-14 81.3 98 45.9
Dinv17859 Davidia involucrata HOM05D001601 ORTHO05D006936 1.0e-13 80.9 100 49.0
PSO210G5169 Papaver somniferum HOM05D001601 ORTHO05D006936 1.0e-13 80.9 104 42.3
Prupe.4G030600 Prunus persica HOM05D001601 ORTHO05D006936 1.0e-13 80.9 100 45.0
PGR004G1615 Punica granatum HOM05D001601 ORTHO05D006936 1.0e-13 80.9 101 41.6
Manes.16G015900 Manihot esculenta HOM05D001601 ORTHO05D006936 1.3e-13 80.5 101 43.6
Duzib192G0154 Durio zibethinus HOM05D001601 ORTHO05D006936 2.9e-13 79.3 100 49.0
MD10G1309600 Malus domestica HOM05D001601 ORTHO05D006936 2.9e-13 79.3 100 45.0
Solyc02g079810.3 Solanum lycopersicum HOM05D001601 ORTHO05D006936 5.0e-13 78.6 101 42.6
Atru.chr10.2084 Acer truncatum HOM05D001601 ORTHO05D006936 6.5e-13 78.2 106 41.5
PGSC0003DMG400021719 Solanum tuberosum HOM05D001601 ORTHO05D006936 6.5e-13 78.2 101 43.6
THA.LOC104807908 Tarenaya hassleriana HOM05D001601 ORTHO05D006936 6.5e-13 78.2 103 39.8
Nitab4.5_0003045g0030 Nicotiana tabacum HOM05D001601 ORTHO05D006936 1.1e-12 77.4 101 42.6
RcHm_v2.0_Chr5g0004791 Rosa chinensis HOM05D001601 ORTHO05D006936 1.1e-12 77.4 103 42.7
CAN.G424.87 Capsicum annuum HOM05D001601 ORTHO05D006936 1.5e-12 77.0 101 43.6
Nitab4.5_0012549g0030 Nicotiana tabacum HOM05D001601 ORTHO05D006936 1.5e-12 77.0 105 43.8
CSS0013390 Camellia sinensis var. sinensis HOM05D001601 ORTHO05D006936 1.9e-12 76.6 100 44.0
FAN25G1141 Fragaria x ananassa HOM05D001601 ORTHO05D006936 1.9e-12 76.6 103 42.7
Sopen02g024580 Solanum pennellii HOM05D001601 ORTHO05D006936 4.2e-12 75.5 101 42.6
PSO339G4922 Papaver somniferum HOM05D001601 ORTHO05D006936 5.5e-12 75.1 103 39.8
Actinidia24046 Actinidia chinensis HOM05D001601 ORTHO05D006936 7.2e-12 74.7 100 45.0
FvH4_3g03170 Fragaria vesca HOM05D001601 ORTHO05D006936 7.2e-12 74.7 103 42.7
PSO801G0803 Papaver somniferum HOM05D001601 ORTHO05D006936 9.5e-12 74.3 108 42.6
Peaxi162Scf00931g00515 Petunia axillaris HOM05D001601 ORTHO05D006936 1.6e-11 73.6 101 40.6
QL05p077813 Quercus lobata HOM05D001601 ORTHO05D006936 1.6e-11 73.6 105 41.9
Eucgr.D00877 Eucalyptus grandis HOM05D001601 ORTHO05D006936 2.1e-11 73.2 105 39.0
FAN21G1209 Fragaria x ananassa HOM05D001601 ORTHO05D006936 2.1e-11 73.2 103 40.8
Glyma.15G064000 Glycine max HOM05D001601 ORTHO05D006936 2.1e-11 73.2 103 39.8
Ciclev10017674m.g Citrus clementina HOM05D001601 ORTHO05D006936 2.7e-11 72.8 100 41.0
Gorai.011G019900 Gossypium raimondii HOM05D001601 ORTHO05D006936 3.6e-11 72.4 101 43.6
Thecc.06G206300 Theobroma cacao HOM05D001601 ORTHO05D006936 3.6e-11 72.4 136 35.3
Gohir.A10G017650 Gossypium hirsutum HOM05D001601 ORTHO05D006936 4.7e-11 72.0 101 43.6
Gohir.D10G017900 Gossypium hirsutum HOM05D001601 ORTHO05D006936 4.7e-11 72.0 101 43.6
COL.COLO4_31670 Corchorus olitorius HOM05D001601 ORTHO05D006936 6.1e-11 71.6 105 43.8
vmacro15846 Vaccinium macrocarpon HOM05D001601 ORTHO05D006936 6.1e-11 71.6 99 41.4
Carub.0007s2009 Capsella rubella HOM05D001601 ORTHO05D006936 8.0e-11 71.2 110 37.3
Duzib160G0418 Durio zibethinus HOM05D001601 ORTHO05D006936 8.0e-11 71.2 100 44.0
Nitab4.5_0003347g0100 Nicotiana tabacum HOM05D000055 ORTHO05D002202 8.0e-11 71.2 99 43.4
Phvul.006G195500 Phaseolus vulgaris HOM05D001601 ORTHO05D006936 8.0e-11 71.2 100 39.0
Sc24g0000600 Simmondsia chinensis HOM05D001601 ORTHO05D006936 8.0e-11 71.2 103 42.7
Phvul.006G195400 Phaseolus vulgaris HOM05D001601 ORTHO05D006936 1.0e-10 70.9 100 40.0
Sabra04G0016800 Salix brachista HOM05D001601 ORTHO05D006936 1.0e-10 70.9 103 39.8
AL7G32770 Arabidopsis lyrata HOM05D001601 ORTHO05D006936 1.8e-10 70.1 109 39.4
Lalb_Chr18g0060091 Lupinus albus HOM05D001601 ORTHO05D006936 2.3e-10 69.7 108 41.7
Peaxi162Scf00003g01722 Petunia axillaris HOM05D001601 ORTHO05D006936 2.3e-10 69.7 115 39.1
Potri.004G029800 Populus trichocarpa HOM05D001601 ORTHO05D006936 2.3e-10 69.7 103 38.8
BcaNung03825 Brassica carinata HOM05D001601 ORTHO05D006936 3.0e-10 69.3 124 33.9
VMungo0540G1059 Vigna mungo HOM05D001601 ORTHO05D006936 3.0e-10 69.3 105 37.1
CANSAT56G4233 Cannabis sativa HOM05D001601 ORTHO05D006936 5.2e-10 68.6 126 33.3
CARHR227920 Cardamine hirsuta HOM05D001601 ORTHO05D006936 5.2e-10 68.6 109 37.6
Thhalv10027186m.g Eutrema salsugineum HOM05D001601 ORTHO05D006936 5.2e-10 68.6 109 35.8
Aa31LG6G3380 Aethionema arabicum HOM05D001601 ORTHO05D006936 6.8e-10 68.2 109 37.6
arahy.Tifrunner.gnm1.ann1.D0FPDW Arachis hypogaea HOM05D001601 ORTHO05D006936 6.8e-10 68.2 103 37.9
arahy.Tifrunner.gnm1.ann1.4R4J32 Arachis hypogaea HOM05D001601 ORTHO05D006936 8.8e-10 67.8 103 37.9
Glyma.15G063900 Glycine max HOM05D001601 ORTHO05D006936 8.8e-10 67.8 100 36.0
Manes.17G030700 Manihot esculenta HOM05D001601 ORTHO05D006936 8.8e-10 67.8 103 42.7
Sed0016320 Sechium edule HOM05D001601 ORTHO05D006936 8.8e-10 67.8 99 39.4
TWI38G2289 Tripterygium wilfordii HOM05D001601 ORTHO05D006936 8.8e-10 67.8 101 38.6
AT4G21330 Arabidopsis thaliana HOM05D001601 ORTHO05D006936 1.2e-09 67.4 109 37.6
Lsat_1_v5_gn_7_18580 Lactuca sativa HOM05D001601 ORTHO05D006936 1.2e-09 67.4 101 39.6
Ca_18464_v3 Cicer arietinum L. HOM05D001601 ORTHO05D006936 2.0e-09 66.6 100 36.0
Ca_29636_v3 Cicer arietinum L. HOM05D001601 ORTHO05D006936 2.0e-09 66.6 100 36.0
Oeu050578.1 Olea europaea HOM05D001601 ORTHO05D006936 2.0e-09 66.6 102 35.3
Sp7g19420 Schrenkiella parvula HOM05D001601 ORTHO05D006936 2.0e-09 66.6 109 39.4
Rhsim02G0116400 Rhododendron simsii HOM05D001601 ORTHO05D006936 3.4e-09 65.9 101 37.6
EL10As6g23659 Beta vulgaris HOM05D001601 ORTHO05D006936 4.4e-09 65.5 107 35.5
CDE02G4468 Ceratophyllum demersum HOM05D001601 ORTHO05D006936 4.4e-09 65.5 100 36.0
BcaC01g00703 Brassica carinata HOM05D001601 ORTHO05D006936 5.7e-09 65.1 110 34.5
C03p83350 Brassica napus HOM05D001601 ORTHO05D006936 5.7e-09 65.1 110 34.5
BolC3t20616H Brassica oleracea HOM05D001601 ORTHO05D006936 5.7e-09 65.1 110 34.5
Lalb_Chr16g0383321 Lupinus albus HOM05D001601 ORTHO05D006936 5.7e-09 65.1 97 38.1
Nitab4.5_0000212g0130 Nicotiana tabacum HOM05D000055 ORTHO05D002202 5.7e-09 65.1 93 46.2
RcHm_v2.0_Chr5g0025741 Rosa chinensis HOM05D001601 ORTHO05D006936 5.7e-09 65.1 100 39.0
Aa31LG9G9270 Aethionema arabicum HOM05D001601 ORTHO05D006936 7.5e-09 64.7 105 35.2
Lj3A1054T81 Lonicera japonica HOM05D001601 ORTHO05D002628 7.5e-09 64.7 102 36.3
Cc02_g11910 Coffea canephora HOM05D001601 ORTHO05D006936 9.8e-09 64.3 102 37.3
BcaB03g11695 Brassica carinata HOM05D001601 ORTHO05D006936 1.3e-08 63.9 109 34.9
Medtr4g091990 Medicago truncatula HOM05D001601 ORTHO05D006936 1.3e-08 63.9 99 36.4
A01p12660 Brassica napus HOM05D001601 ORTHO05D006936 1.7e-08 63.5 123 35.0
BraA01t01209Z Brassica rapa HOM05D001601 ORTHO05D006936 1.7e-08 63.5 123 35.0
AUR62012560 Chenopodium quinoa HOM05D001601 ORTHO05D006936 1.7e-08 63.5 107 38.3
Lj2g0002048 Lotus japonicus HOM05D001601 ORTHO05D006936 1.7e-08 63.5 102 37.3
THA.LOC104812950 Tarenaya hassleriana HOM05D001601 ORTHO05D006936 1.7e-08 63.5 105 37.1
Oeu015561.1 Olea europaea HOM05D001601 ORTHO05D002628 2.2e-08 63.2 128 32.0
Migut.M01250 Erythranthe guttata HOM05D001601 ORTHO05D006936 2.8e-08 62.8 100 36.0
Lj4g0002570 Lotus japonicus HOM05D001601 ORTHO05D006936 2.8e-08 62.8 100 36.0
Psat7g107600 Pisum sativum HOM05D001601 ORTHO05D006936 2.8e-08 62.8 100 36.0
AUR62014640 Chenopodium quinoa HOM05D001601 ORTHO05D006936 3.7e-08 62.4 106 35.8
AUR62044052 Chenopodium quinoa HOM05D001601 ORTHO05D006936 3.7e-08 62.4 106 35.8
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 3.7e-08 62.4 97 40.2
FAN21G1145 Fragaria x ananassa HOM05D001601 ORTHO05D006936 3.7e-08 62.4 99 38.4
Medtr4g091910 Medicago truncatula HOM05D001601 ORTHO05D006936 3.7e-08 62.4 102 36.3
Psat7g107440 Pisum sativum HOM05D001601 ORTHO05D006936 3.7e-08 62.4 101 32.7
Glyma.07G187900 Glycine max HOM05D001601 ORTHO05D006936 4.9e-08 62.0 99 36.4
Sabra11G0025700 Salix brachista HOM05D001601 ORTHO05D006936 4.9e-08 62.0 103 34.0
Migut.M01256 Erythranthe guttata HOM05D001601 ORTHO05D006936 6.3e-08 61.6 103 36.9
HanXRQChr05g0130851 Helianthus annuus HOM05D001601 ORTHO05D006936 6.3e-08 61.6 98 38.8
MBI02_g35315_MAGBIO Magnolia biondii HOM05D001601 ORTHO05D006936 6.3e-08 61.6 100 38.0
QL03p060111 Quercus lobata HOM05D001601 ORTHO05D002628 6.3e-08 61.6 119 31.9
C01p15250 Brassica napus HOM05D001601 ORTHO05D006936 8.3e-08 61.2 109 37.6
BolC1t01477H Brassica oleracea HOM05D001601 ORTHO05D006936 8.3e-08 61.2 109 37.6
Lj4g0026669 Lotus japonicus HOM05D001601 ORTHO05D006936 8.3e-08 61.2 93 39.8
Haze_12188 Corylus avellana HOM05D001601 ORTHO05D002628 1.4e-07 60.5 99 34.3
Migut.M01254 Erythranthe guttata HOM05D001601 ORTHO05D006936 1.4e-07 60.5 100 36.0
Glyma.13G250300 Glycine max HOM05D001601 ORTHO05D006936 1.4e-07 60.5 105 32.4
Hund21310 Selenicereus undatus HOM05D001601 ORTHO05D006936 1.4e-07 60.5 106 35.8
Dinv24842 Davidia involucrata HOM05D000812 ORTHO05D002628 1.8e-07 60.1 111 33.3
Migut.M01252 Erythranthe guttata HOM05D001601 ORTHO05D006936 2.4e-07 59.7 102 37.3
TPR.G13933 Trifolium pratense HOM05D001601 ORTHO05D006936 2.4e-07 59.7 101 35.6
CSS0049556 Camellia sinensis var. sinensis HOM05D001601 ORTHO05D002628 3.1e-07 59.3 126 28.6
HPP92_012948 Vanilla planifolia HOM05D001601 ORTHO05D002628 3.1e-07 59.3 104 33.7
ECA236G4197 Erigeron canadensis HOM05D001601 ORTHO05D006936 4.1e-07 58.9 102 35.3
TPR.G13908 Trifolium pratense HOM05D001601 ORTHO05D006936 4.1e-07 58.9 102 35.3
Sed0019722 Sechium edule HOM05D001601 ORTHO05D002628 5.4e-07 58.5 138 28.3
DCAR_008106 Daucus carota HOM05D001601 ORTHO05D006936 7.0e-07 58.2 98 36.7
Manes.12G028000 Manihot esculenta HOM05D001601 ORTHO05D002628 1.2e-06 57.4 119 30.3
Glyma.13G250200 Glycine max HOM05D001601 ORTHO05D006936 1.6e-06 57.0 99 37.4
Manes.04G072000 Manihot esculenta HOM05D001601 ORTHO05D002628 1.6e-06 57.0 130 26.9
VMungo0540G0143 Vigna mungo HOM05D001601 ORTHO05D006936 1.6e-06 57.0 92 34.8
CSS0039169 Camellia sinensis var. sinensis HOM05D001601 ORTHO05D002628 2.0e-06 56.6 110 32.7
ClCG02G004010 Citrullus lanatus HOM05D001601 ORTHO05D002628 2.0e-06 56.6 138 28.3
Medtr1g112680 Medicago truncatula HOM05D001601 ORTHO05D002628 2.0e-06 56.6 133 29.3
Oeu015560.1 Olea europaea HOM05D001601 ORTHO05D002628 2.0e-06 56.6 102 31.4
TAR629G2382 Trochodendron aralioides HOM05D001601 ORTHO05D002628 2.0e-06 56.6 135 30.4
Glyma.10G281800 Glycine max HOM05D001601 ORTHO05D002628 2.7e-06 56.2 131 27.5
SHI50341 Sapria himalayana HOM05D001601 ORTHO05D006936 3.5e-06 55.8 105 34.3
Dinv14116 Davidia involucrata HOM05D001601 ORTHO05D002628 4.5e-06 55.5 167 25.1
Thhalv10022620m.g Eutrema salsugineum HOM05D001601 ORTHO05D002628 4.5e-06 55.5 126 31.0
MSTRG.16976 Avicennia marina HOM05D001601 ORTHO05D002628 5.9e-06 55.1 170 26.5
DCAR_004707 Daucus carota HOM05D001601 ORTHO05D002628 5.9e-06 55.1 71 40.8
DCAR_004708 Daucus carota HOM05D001601 ORTHO05D002628 5.9e-06 55.1 71 40.8
VMungo0251G2485 Vigna mungo HOM05D001601 ORTHO05D002628 5.9e-06 55.1 112 27.7
Cfa009154 Carpinus fangiana HOM05D001601 ORTHO05D002628 7.7e-06 54.7 120 30.8
CiPaw.06G071400 Carya illinoinensis HOM05D001601 ORTHO05D002628 7.7e-06 54.7 119 29.4
Rhsim05G0054200 Rhododendron simsii HOM05D001601 ORTHO05D002628 7.7e-06 54.7 134 26.1
GSVIVG01024008001 Vitis vinifera HOM05D001601 ORTHO05D002628 7.7e-06 54.7 147 25.9


User provided reference genes

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