Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01176 Aquilegia oxysepala HOM05D002653 ORTHO05D002623 9.3e-81 303.5 158 100.0
Aqoxy2G01525 Aquilegia oxysepala HOM05D002653 ORTHO05D002623 2.5e-70 268.9 143 95.8
TAR624G1146 Trochodendron aralioides HOM05D002653 ORTHO05D002623 5.3e-52 208.0 143 73.4
PSO063G3289 Papaver somniferum HOM05D002653 ORTHO05D002623 9.1e-52 207.2 143 73.4
QL04p064964 Quercus lobata HOM05D002653 ORTHO05D002623 2.9e-50 202.2 143 70.6
Nn7g37406 Nelumbo nucifera HOM05D002653 ORTHO05D002623 3.8e-50 201.8 143 70.6
Dinv38369 Davidia involucrata HOM05D002653 ORTHO05D002623 6.5e-50 201.1 143 69.9
Lj4C825G3 Lonicera japonica HOM05D002653 ORTHO05D002623 8.5e-50 200.7 143 70.6
RcHm_v2.0_Chr2g0148311 Rosa chinensis HOM05D002653 ORTHO05D002623 8.5e-50 200.7 143 70.6
CSS0041142 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 1.1e-49 200.3 143 69.2
CSS0047039 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 1.1e-49 200.3 143 69.2
FvH4_6g36300 Fragaria vesca HOM05D002653 ORTHO05D002623 1.1e-49 200.3 143 70.6
FAN14G0870 Fragaria x ananassa HOM05D002653 ORTHO05D002623 1.1e-49 200.3 143 70.6
FAN14G5588 Fragaria x ananassa HOM05D002653 ORTHO05D002623 1.1e-49 200.3 143 70.6
GSVIVG01019366001 Vitis vinifera HOM05D002653 ORTHO05D002623 1.1e-49 200.3 143 70.6
Manes.11G165700 Manihot esculenta HOM05D002653 ORTHO05D002623 1.9e-49 199.5 143 70.6
FAN02G0462 Fragaria x ananassa HOM05D002653 ORTHO05D002623 3.2e-49 198.7 143 69.9
Cfa016258 Carpinus fangiana HOM05D002653 ORTHO05D002623 4.2e-49 198.4 143 69.9
Rhsim13G0127300 Rhododendron simsii HOM05D002653 ORTHO05D002623 7.2e-49 197.6 142 69.7
Duzib114G0204 Durio zibethinus HOM05D002653 ORTHO05D002623 1.2e-48 196.8 143 67.8
Atru.chr8.1038_Atru.chr8.1039 Acer truncatum HOM05D002653 ORTHO05D002623 2.1e-48 196.1 143 69.2
Manes.09G076300 Manihot esculenta HOM05D002653 ORTHO05D002623 2.7e-48 195.7 143 70.6
arahy.Tifrunner.gnm1.ann1.21MRAZ Arachis hypogaea HOM05D002653 ORTHO05D002623 3.6e-48 195.3 143 67.8
arahy.Tifrunner.gnm1.ann1.GW217K Arachis hypogaea HOM05D002653 ORTHO05D002623 3.6e-48 195.3 143 67.8
Sabra16G0308200 Salix brachista HOM05D002653 ORTHO05D002623 4.7e-48 194.9 143 69.9
Potri.001G455600 Populus trichocarpa HOM05D002653 ORTHO05D002623 6.1e-48 194.5 143 69.2
Thecc.01G150000 Theobroma cacao HOM05D002653 ORTHO05D002623 8.0e-48 194.1 143 67.1
TWI34G1636 Tripterygium wilfordii HOM05D002653 ORTHO05D002623 8.0e-48 194.1 143 67.8
DCAR_018920 Daucus carota HOM05D002653 ORTHO05D002623 1.0e-47 193.7 143 66.4
CANSAT01G2419 Cannabis sativa HOM05D002653 ORTHO05D002623 1.4e-47 193.4 143 68.5
CiPaw.06G000600 Carya illinoinensis HOM05D002653 ORTHO05D002623 1.4e-47 193.4 143 68.5
Psat0s3513g0080 Pisum sativum HOM05D002653 ORTHO05D002623 1.4e-47 193.4 143 67.8
vmacro03486 Vaccinium macrocarpon HOM05D002653 ORTHO05D002623 1.4e-47 193.4 143 67.1
Ciclev10010886m.g Citrus clementina HOM05D002653 ORTHO05D002623 2.3e-47 192.6 143 67.8
Sc15g0007450 Simmondsia chinensis HOM05D002653 ORTHO05D002623 3.0e-47 192.2 143 67.8
Cpa.g.sc119.2 Carica papaya HOM05D002653 ORTHO05D002623 4.0e-47 191.8 143 67.8
Gohir.A05G394600 Gossypium hirsutum HOM05D002653 ORTHO05D002623 5.2e-47 191.4 143 65.7
Gohir.D04G020351 Gossypium hirsutum HOM05D002653 ORTHO05D002623 5.2e-47 191.4 143 65.7
Gorai.012G024100 Gossypium raimondii HOM05D002653 ORTHO05D002623 5.2e-47 191.4 143 65.7
Phvul.002G328600 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 5.2e-47 191.4 143 67.1
Phvul.002G328704 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 5.2e-47 191.4 143 67.1
VMungo0251G2737 Vigna mungo HOM05D002653 ORTHO05D002623 5.2e-47 191.4 143 67.1
EL10Ac1g01415 Beta vulgaris HOM05D002653 ORTHO05D002623 8.8e-47 190.7 144 68.8
Lalb_Chr01g0009381 Lupinus albus HOM05D002653 ORTHO05D002623 8.8e-47 190.7 143 66.4
Lsat_1_v5_gn_6_56501 Lactuca sativa HOM05D002653 ORTHO05D002623 1.5e-46 189.9 143 66.4
Glyma.13G174600 Glycine max HOM05D002653 ORTHO05D002623 2.0e-46 189.5 143 66.4
LjContig00141g0016117 Lotus japonicus HOM05D002653 ORTHO05D002623 2.6e-46 189.1 143 65.7
Medtr2g007250 Medicago truncatula HOM05D002653 ORTHO05D002623 2.6e-46 189.1 143 65.7
SalBow1G2769 Salvia bowleyana HOM05D002653 ORTHO05D002623 2.6e-46 189.1 143 64.3
AUR62013467 Chenopodium quinoa HOM05D002653 ORTHO05D002623 3.4e-46 188.7 143 64.3
AUR62007656 Chenopodium quinoa HOM05D002653 ORTHO05D002623 4.4e-46 188.3 143 64.3
COL.COLO4_33575 Corchorus olitorius HOM05D002653 ORTHO05D002623 4.4e-46 188.3 143 64.3
SalBow1G3632 Salvia bowleyana HOM05D002653 ORTHO05D002623 4.4e-46 188.3 143 64.3
Nitab4.5_0006025g0010 Nicotiana tabacum HOM05D002653 ORTHO05D002623 5.7e-46 188.0 143 63.6
Lj4g0020533 Lotus japonicus HOM05D002653 ORTHO05D002623 1.3e-45 186.8 143 65.0
Sed0003631 Sechium edule HOM05D002653 ORTHO05D002623 1.3e-45 186.8 143 66.4
PGR044G0026 Punica granatum HOM05D002653 ORTHO05D002623 1.7e-45 186.4 143 66.4
TPR.G8155 Trifolium pratense HOM05D002653 ORTHO05D002623 1.7e-45 186.4 143 64.3
Aa31LG11G3960 Aethionema arabicum HOM05D002653 ORTHO05D002623 2.2e-45 186.0 143 65.7
MSTRG.8096 Avicennia marina HOM05D002653 ORTHO05D002623 2.2e-45 186.0 143 63.6
ECA233G1976 Erigeron canadensis HOM05D002653 ORTHO05D002623 4.8e-45 184.9 143 65.0
HanXRQChr07g0186761 Helianthus annuus HOM05D002653 ORTHO05D002623 4.8e-45 184.9 143 65.0
AL6G36330 Arabidopsis lyrata HOM05D002653 ORTHO05D002623 6.3e-45 184.5 143 64.3
ClCG03G010410 Citrullus lanatus HOM05D002653 ORTHO05D002623 6.3e-45 184.5 143 66.4
AT5G24740 Arabidopsis thaliana HOM05D002653 ORTHO05D002623 8.3e-45 184.1 143 63.6
CAN.G690.1 Capsicum annuum HOM05D002653 ORTHO05D002623 8.3e-45 184.1 143 62.9
CARHR188760 Cardamine hirsuta HOM05D002653 ORTHO05D002623 8.3e-45 184.1 143 64.3
Migut.L00525 Erythranthe guttata HOM05D002653 ORTHO05D002623 8.3e-45 184.1 143 62.9
Migut.L00786 Erythranthe guttata HOM05D002653 ORTHO05D002623 8.3e-45 184.1 143 62.9
Thhalv10003500m.g Eutrema salsugineum HOM05D002653 ORTHO05D002623 8.3e-45 184.1 143 65.0
Sp2g22690 Schrenkiella parvula HOM05D002653 ORTHO05D002623 8.3e-45 184.1 143 64.3
THA.LOC104814962 Tarenaya hassleriana HOM05D002653 ORTHO05D002623 8.3e-45 184.1 143 65.0
Peaxi162Scf00126g00524 Petunia axillaris HOM05D002653 ORTHO05D002623 1.1e-44 183.7 143 62.9
SGA_v2.0_scaffold131G34416 Striga asiatica HOM05D002653 ORTHO05D002623 1.1e-44 183.7 143 63.6
Lsat_1_v5_gn_8_5081 Lactuca sativa HOM05D002653 ORTHO05D002623 2.4e-44 182.6 145 66.2
Sopen11g020620 Solanum pennellii HOM05D002653 ORTHO05D002623 3.1e-44 182.2 143 61.5
ATR1155G033 Amborella trichopoda HOM05D002653 ORTHO05D002623 4.1e-44 181.8 143 64.3
BolC7t44828H Brassica oleracea HOM05D002653 ORTHO05D002623 1.2e-43 180.3 152 59.9
Carub.0006s2259 Capsella rubella HOM05D002653 ORTHO05D002623 1.2e-43 180.3 143 63.6
HPP92_001355 Vanilla planifolia HOM05D002653 ORTHO05D002623 1.2e-43 180.3 143 62.2
CsaV3_1G044330 Cucumis sativus L. HOM05D002653 ORTHO05D002623 2.0e-43 179.5 143 64.3
MD17G1156800 Malus domestica HOM05D002653 ORTHO05D002623 3.5e-43 178.7 128 68.8
BcaNung01253 Brassica carinata HOM05D002653 ORTHO05D002623 7.7e-43 177.6 143 62.2
A06p35550 Brassica napus HOM05D002653 ORTHO05D002623 7.7e-43 177.6 143 62.2
C07p42990 Brassica napus HOM05D002653 ORTHO05D002623 7.7e-43 177.6 143 62.2
BraA06t26480Z Brassica rapa HOM05D002653 ORTHO05D002623 7.7e-43 177.6 143 62.2
MELO3C010025.2 Cucumis melo HOM05D002653 ORTHO05D002623 7.7e-43 177.6 143 63.6
Cc11_g00280 Coffea canephora HOM05D002653 ORTHO05D002623 1.3e-42 176.8 143 60.1
Prupe.3G028500 Prunus persica HOM05D002653 ORTHO05D002623 2.2e-42 176.0 128 68.0
unitig_8.g3108 Utricularia gibba HOM05D002653 ORTHO05D002623 2.2e-42 176.0 143 60.8
Ca_27225_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 1.5e-41 173.3 143 63.6
Os08g0116566 Oryza sativa ssp. japonica HOM05D002653 ORTHO05D002623 1.5e-41 173.3 144 58.3
Zm00001eb260890 Zea mays HOM05D002653 ORTHO05D002623 4.2e-41 171.8 143 58.7
Ca_01486_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 3.4e-38 162.2 125 66.4
Gorai.012G024500 Gossypium raimondii HOM05D002653 ORTHO05D002623 1.3e-37 160.2 125 63.2
Mapoly0009s0011 Marchantia polymorpha HOM05D002653 ORTHO05D002623 2.9e-34 149.1 143 51.7
Haze_24503 Corylus avellana HOM05D002653 ORTHO05D002623 3.3e-33 145.6 107 68.2
Pp3c15_25690 Physcomitrium patens HOM05D002653 ORTHO05D002623 1.5e-30 136.7 143 50.3
Ca_14756_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 7.5e-30 134.4 108 61.1
SMO353G0260 Selaginella moellendorffii HOM05D002653 ORTHO05D002623 8.3e-29 131.0 143 46.9
arahy.Tifrunner.gnm1.ann1.U4FA7I Arachis hypogaea HOM05D002653 ORTHO05D002623 1.6e-27 126.7 114 58.8
MD09G1170300 Malus domestica HOM05D002653 ORTHO05D002623 1.6e-27 126.7 143 48.3
Actinidia28837 Actinidia chinensis HOM05D002653 ORTHO05D002623 3.5e-27 125.6 108 60.2
arahy.Tifrunner.gnm1.ann1.LJ799F Arachis hypogaea HOM05D002653 ORTHO05D002623 1.1e-25 120.6 112 60.7
Actinidia28775 Actinidia chinensis HOM05D002313 ORTHO05D002623 1.6e-24 116.7 100 60.0
Ca_09437_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 1.3e-21 107.1 89 60.7
HPP92_001361 Vanilla planifolia HOM05D002653 ORTHO05D002623 1.6e-19 100.1 143 42.0
Ca_30710_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 3.0e-18 95.9 70 72.9
SEGI_37137 Sequoiadendron giganteum HOM05D002653 ORTHO05D002623 8.1e-16 87.8 73 56.2
Cfa027332 Carpinus fangiana HOM05D001092 ORTHO05D000923 1.9e-12 76.6 153 30.1
Actinidia28844 Actinidia chinensis HOM05D002313 ORTHO05D002623 4.1e-12 75.5 78 52.6
arahy.Tifrunner.gnm1.ann1.P3JCM3 Arachis hypogaea HOM05D002653 ORTHO05D002623 1.0e-10 70.9 96 45.8
arahy.Tifrunner.gnm1.ann1.Y0I0AR Arachis hypogaea HOM05D002653 ORTHO05D002623 6.2e-08 61.6 60 56.7
PRCOL_00001171 Prasinoderma coloniale HOM05D002653 ORTHO05D002623 2.3e-07 59.7 157 26.8
Haze_24502 Corylus avellana HOM05D002653 ORTHO05D002623 5.2e-07 58.5 37 75.7
arahy.Tifrunner.gnm1.ann1.FGIJ89 Arachis hypogaea HOM05D002653 ORTHO05D002623 8.9e-07 57.8 41 68.3
FAN05G4926 Fragaria x ananassa HOM05D002653 ORTHO05D002623 8.9e-07 57.8 36 77.8
MBI12_g09298_MAGBIO Magnolia biondii HOM05D002653 ORTHO05D002623 1.2e-06 57.4 36 69.4
CBR_g47051 Chara braunii HOM05D002653 ORTHO05D002623 2.6e-06 56.2 53 49.1


User provided reference genes

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