Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 8.1e-146 521.5 585 100.0
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 5.3e-97 359.4 583 72.4
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 5.1e-92 342.8 583 81.1
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 3.3e-91 340.1 583 77.7
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 7.4e-91 339.0 582 68.6
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 1.1e-89 335.1 583 70.2
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 1.1e-89 335.1 583 72.7
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 1.8e-89 334.3 564 79.6
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 5.3e-89 332.8 582 72.5
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 7.0e-89 332.4 585 68.5
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 2.0e-88 330.9 583 71.7
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 2.0e-88 330.9 583 71.4
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 5.9e-88 329.3 583 67.4
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 5.9e-88 329.3 583 81.3
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 7.7e-88 328.9 583 73.9
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 1.0e-87 328.6 584 70.7
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 1.3e-87 328.2 582 76.3
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 1.7e-87 327.8 582 79.2
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 1.7e-87 327.8 582 72.2
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 2.9e-87 327.0 582 78.0
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 2.9e-87 327.0 582 72.3
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 5.0e-87 326.2 583 71.9
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 2.5e-86 323.9 582 70.8
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 3.2e-86 323.6 585 67.2
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 3.2e-86 323.6 583 71.2
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 1.2e-85 321.6 583 77.5
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 1.0e-84 318.5 583 78.2
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 3.9e-84 316.6 589 70.1
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 3.9e-84 316.6 584 76.9
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 3.9e-84 316.6 583 81.3
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 5.2e-84 316.2 583 70.0
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 1.5e-83 314.7 585 67.9
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 2.0e-83 314.3 586 81.2
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 2.6e-83 313.9 583 69.8
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 7.4e-83 312.4 582 73.5
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 2.2e-82 310.8 583 77.4
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 2.8e-82 310.5 585 64.1
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 5.3e-81 306.2 582 78.0
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 7.0e-81 305.8 582 73.4
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 2.0e-80 304.3 589 70.5
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 2.0e-80 304.3 582 71.1
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 2.0e-80 304.3 596 71.8
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 3.5e-80 303.5 582 77.8
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 4.5e-80 303.1 582 73.5
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 5.9e-80 302.8 584 74.3
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 2.2e-79 300.8 596 70.8
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 1.5e-78 298.1 583 65.4
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 4.2e-78 296.6 583 66.0
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 6.1e-77 292.7 584 77.1
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 1.4e-76 291.6 582 68.6
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 1.8e-76 291.2 583 68.4
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 2.3e-76 290.8 582 66.8
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 2.3e-76 290.8 582 67.0
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 3.0e-76 290.4 583 66.2
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 2.6e-75 287.3 583 65.0
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 4.4e-75 286.6 587 64.7
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 7.5e-75 285.8 627 68.9
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 8.3e-74 282.3 583 72.4
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 8.3e-74 282.3 585 64.4
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 2.4e-73 280.8 590 74.9
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 4.1e-73 280.0 563 79.0
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 7.0e-73 279.3 515 72.8
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 1.2e-72 278.5 586 76.8
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 1.0e-71 275.4 593 63.4
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 3.8e-71 273.5 364 72.0
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 4.2e-70 270.0 583 64.0
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 5.5e-70 269.6 584 50.7
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 2.1e-69 267.7 506 70.2
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 2.7e-69 267.3 412 77.2
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 8.0e-69 265.8 311 59.2
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 5.2e-68 263.1 593 62.2
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 8.8e-68 262.3 683 62.7
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 1.2e-67 261.9 515 59.8
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 3.4e-67 260.4 599 64.1
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 1.3e-66 258.5 575 55.7
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 2.2e-66 257.7 599 69.8
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 6.3e-66 256.1 563 72.3
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 8.3e-66 255.8 558 64.9
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 4.1e-65 253.4 582 65.5
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 4.1e-65 253.4 311 61.4
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 3.5e-64 250.4 582 68.4
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 1.0e-63 248.8 435 76.3
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 4.2e-62 243.4 564 61.9
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 4.0e-60 236.9 567 62.1
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 8.9e-60 235.7 515 65.8
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 7.5e-59 232.6 582 63.2
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 2.2e-58 231.1 537 63.7
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 4.1e-57 226.9 587 65.1
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 2.0e-56 224.6 643 53.3
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 2.9e-55 220.7 587 58.3
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 1.9e-54 218.0 588 62.9
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 5.6e-54 216.5 311 57.2
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 9.5e-54 215.7 595 60.8
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 7.0e-49 199.5 559 55.6
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 1.2e-48 198.7 221 61.1
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 1.6e-48 198.4 561 66.1
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 2.0e-48 198.0 585 67.0
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 2.7e-48 197.6 287 60.6
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 6.2e-45 186.4 591 53.6
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 1.1e-44 185.7 560 35.4
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 2.0e-43 181.4 542 68.5
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 3.2e-41 174.1 519 62.0
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 9.2e-33 146.0 244 51.2
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 4.7e-29 133.7 198 54.0
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 2.2e-26 124.8 249 41.8
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 8.4e-26 122.9 75 77.3
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 8.4e-26 122.9 75 77.3
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 2.4e-25 121.3 75 76.0
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 5.4e-25 120.2 75 76.0
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 7.8e-24 116.3 75 74.7
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 9.6e-22 109.4 94 56.4
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 9.0e-20 102.8 98 56.1
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 2.9e-18 97.8 83 59.0
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 3.5e-16 90.9 69 59.4
Thecc.07G078400 Theobroma cacao HOM05D006220 ORTHO05D007590 1.0e-15 89.4 98 73.5
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 3.0e-15 87.8 60 66.7
Sc13g0008670 Simmondsia chinensis HOM05D006220 ORTHO05D007590 3.0e-15 87.8 98 74.5
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 7.3e-14 83.2 75 48.0
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 2.8e-13 81.3 53 69.8
Cre01.g054100 Chlamydomonas reinhardtii HOM05D006220 ORTHO05D007590 1.1e-12 79.3 228 53.1
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 1.4e-12 79.0 68 55.9
Cc05_g12270 Coffea canephora HOM05D006220 ORTHO05D007590 9.9e-11 72.8 41 80.5
Cc05_g12290 Coffea canephora HOM05D006220 ORTHO05D007590 9.9e-11 72.8 41 80.5
Cc05_g12300 Coffea canephora HOM05D006220 ORTHO05D007590 9.9e-11 72.8 41 80.5
Atru.chr2.2722 Acer truncatum HOM05D006220 ORTHO05D017154 4.9e-10 70.5 111 41.4
MCO03G083 Micromonas commoda HOM05D006220 ORTHO05D007590 2.4e-09 68.2 295 28.5
AL230U10010 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 4.6e-08 63.9 39 79.5


User provided reference genes

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