Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 9.3e-215 750.0 388 100.0
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 9.4e-151 537.3 349 85.1
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 2.0e-116 423.3 333 70.3
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 8.3e-115 417.9 336 68.2
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 1.1e-114 417.5 335 69.9
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 9.2e-114 414.5 333 69.1
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.2e-113 414.1 333 68.8
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 2.1e-113 413.3 335 68.4
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 3.5e-113 412.5 288 75.3
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 8.6e-112 407.9 342 66.7
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 8.6e-112 407.9 331 68.6
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 1.1e-111 407.5 337 68.2
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 1.1e-111 407.5 330 69.1
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 1.5e-111 407.1 331 69.2
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 5.6e-111 405.2 331 68.6
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 5.6e-111 405.2 332 67.8
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 1.6e-110 403.7 336 66.7
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 1.4e-109 400.6 331 68.6
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 2.4e-109 399.8 330 68.5
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 2.4e-109 399.8 331 68.0
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 5.2e-109 398.7 330 67.6
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 1.5e-108 397.1 323 67.5
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 2.0e-108 396.7 338 65.7
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 2.6e-108 396.4 331 67.1
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 7.6e-108 394.8 353 63.7
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 1.7e-107 393.7 331 67.4
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 3.8e-107 392.5 342 64.0
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 2.4e-106 389.8 337 65.0
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 5.4e-106 388.7 315 69.5
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 1.2e-105 387.5 333 64.3
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 4.6e-105 385.6 334 64.1
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 4.6e-105 385.6 334 63.8
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 1.7e-104 383.6 333 64.3
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 5.1e-104 382.1 332 64.8
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 6.6e-104 381.7 332 64.8
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 8.7e-104 381.3 334 64.7
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 5.6e-103 378.6 338 63.0
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 7.3e-103 378.3 323 65.6
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 2.8e-102 376.3 285 70.2
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 4.8e-102 375.6 330 64.2
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 6.2e-102 375.2 337 62.9
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 8.1e-102 374.8 335 63.3
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 1.1e-101 374.4 333 64.3
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 1.4e-101 374.0 337 63.2
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 1.4e-101 374.0 336 62.8
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 1.8e-101 373.6 329 63.5
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 1.8e-101 373.6 403 56.6
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 2.4e-101 373.2 333 62.5
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 3.1e-101 372.9 329 63.5
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 3.1e-101 372.9 342 61.7
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 4.0e-101 372.5 335 60.9
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 5.3e-101 372.1 363 60.1
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.3e-101 372.1 290 71.0
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 5.3e-101 372.1 336 61.9
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 1.2e-100 370.9 322 62.7
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 1.2e-100 370.9 345 61.2
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 1.5e-100 370.5 338 61.8
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 2.0e-100 370.2 334 63.2
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 2.0e-100 370.2 329 63.5
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 4.4e-100 369.0 314 65.9
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 4.4e-100 369.0 335 62.4
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 3.8e-99 365.9 309 64.4
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 1.9e-98 363.6 329 61.7
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 2.4e-98 363.2 368 57.9
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 1.6e-97 360.5 291 68.4
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 4.6e-97 359.0 331 61.9
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 1.0e-96 357.8 329 61.1
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 2.3e-96 356.7 323 61.3
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 2.3e-96 356.7 323 61.9
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 3.0e-96 356.3 331 61.0
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 3.0e-96 356.3 331 61.0
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.0e-96 356.3 331 62.5
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.9e-96 355.9 331 62.2
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 3.9e-96 355.9 342 62.0
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 5.1e-96 355.5 329 60.5
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 5.1e-96 355.5 289 65.7
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 1.5e-95 354.0 327 60.6
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 1.5e-95 354.0 329 60.2
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 1.5e-95 354.0 274 70.8
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 1.5e-95 354.0 333 60.4
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 2.5e-95 353.2 357 58.5
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 2.5e-95 353.2 331 61.6
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 5.6e-95 352.1 337 59.6
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 2.8e-94 349.7 329 59.9
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 3.6e-94 349.4 329 59.6
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 6.2e-94 348.6 322 60.9
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 1.4e-93 347.4 331 59.2
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 1.8e-93 347.1 365 56.7
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 1.5e-92 344.0 365 55.6
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 5.8e-92 342.0 333 59.2
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 7.6e-92 341.7 280 66.1
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 9.9e-92 341.3 254 72.0
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 4.9e-91 339.0 299 62.9
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 3.2e-90 336.3 311 60.5
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 8.7e-88 328.2 309 60.2
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 2.5e-87 326.6 274 65.3
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 2.5e-87 326.6 249 68.3
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 9.6e-87 324.7 195 83.6
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 5.8e-84 315.5 224 73.7
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 1.3e-83 314.3 189 84.1
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 2.2e-83 313.5 310 55.8
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 2.9e-83 313.2 327 54.1
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 4.9e-83 312.4 266 66.5
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 5.1e-80 302.4 243 67.5
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 8.7e-80 301.6 277 61.4
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 1.1e-79 301.2 261 64.8
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 7.4e-79 298.5 296 56.8
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 4.0e-77 292.7 296 56.4
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 4.5e-76 289.3 300 53.7
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 4.3e-71 272.7 301 51.5
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 2.8e-70 270.0 198 72.2
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.1e-69 268.1 224 67.4
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 1.4e-66 257.7 204 68.6
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 4.8e-62 242.7 210 64.8
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 3.1e-61 240.0 274 51.1
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 1.8e-53 214.2 148 74.3
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 3.1e-53 213.4 205 60.5
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 4.5e-52 209.5 112 95.5
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 1.1e-50 204.9 294 40.5
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 1.5e-42 177.9 170 62.9
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 1.2e-41 174.9 136 69.9
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 6.1e-41 172.6 277 40.1
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 2.9e-27 127.1 209 40.2
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 2.5e-26 124.0 90 68.9
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 6.3e-22 109.4 204 41.7
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 2.7e-20 104.0 113 55.8
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 3.3e-18 97.1 92 59.8
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 8.0e-17 92.4 62 75.8
Aqoxy8s001 Aquilegia oxysepala HOM05D000074 ORTHO05D012273 1.2e-15 88.6 49 93.9
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.8e-15 86.3 55 80.0
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 7.5e-15 85.9 55 81.8
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.2e-14 84.3 55 80.0
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.9e-14 84.0 54 75.9
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 4.9e-14 83.2 55 78.2
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 1.0e-11 75.5 91 49.5
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.9e-10 71.2 37 83.8
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 5.6e-10 69.7 48 70.8
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 1.2e-09 68.6 65 58.5
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 6.2e-09 66.2 108 44.4
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 6.2e-09 66.2 41 78.0
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 1.8e-08 64.7 35 88.6
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 1.8e-08 64.7 39 82.1
Rhsim07G0166700 Rhododendron simsii HOM05D005156 ORTHO05D050672 1.2e-07 62.0 69 52.2
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 2.0e-07 61.2 47 68.1
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 1.3e-06 58.5 114 36.0


User provided reference genes

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