Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 1.6e-138 496.1 258 100.0
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 3.4e-80 302.4 229 66.8
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 5.8e-80 301.6 229 66.8
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 9.9e-80 300.8 229 66.8
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 3.4e-72 275.8 215 65.1
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 4.4e-72 275.4 216 64.8
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 2.3e-68 263.1 254 56.3
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 5.1e-68 261.9 213 63.4
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 5.1e-68 261.9 214 60.7
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 3.3e-67 259.2 219 61.2
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 3.3e-67 259.2 248 54.8
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 2.1e-66 256.5 219 60.3
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 1.1e-65 254.2 211 60.7
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 1.1e-65 254.2 211 60.7
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 1.4e-65 253.8 205 62.4
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 1.4e-65 253.8 230 58.7
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 1.8e-65 253.4 213 61.0
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 1.8e-65 253.4 223 58.7
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 3.1e-65 252.7 244 53.7
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 6.9e-65 251.5 220 60.9
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 9.0e-65 251.1 248 55.2
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 2.0e-64 250.0 247 55.1
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 2.6e-64 249.6 213 62.9
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 2.6e-64 249.6 220 59.5
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 1.7e-63 246.9 211 60.2
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 8.4e-63 244.6 254 50.8
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 8.4e-63 244.6 233 53.6
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 1.1e-62 244.2 218 56.0
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 1.1e-62 244.2 246 52.8
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 3.2e-62 242.7 225 53.3
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 3.2e-62 242.7 225 59.1
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 4.2e-62 242.3 226 56.2
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 5.5e-62 241.9 246 53.7
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 5.5e-62 241.9 229 56.3
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 5.5e-62 241.9 250 52.4
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 5.5e-62 241.9 244 54.9
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 1.2e-61 240.7 212 58.5
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 2.7e-61 239.6 227 55.1
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 3.5e-61 239.2 255 53.7
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 1.0e-60 237.7 211 57.8
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 1.0e-60 237.7 216 59.3
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 1.8e-60 236.9 222 55.4
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.3e-60 236.5 221 57.5
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 3.0e-60 236.1 220 56.4
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 3.9e-60 235.7 208 59.6
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 5.1e-60 235.3 224 58.0
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 5.1e-60 235.3 253 51.4
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 5.1e-60 235.3 226 54.9
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 6.7e-60 235.0 222 57.2
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 8.7e-60 234.6 245 53.1
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 1.1e-59 234.2 230 53.5
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 1.1e-59 234.2 234 53.8
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 4.3e-59 232.3 219 56.2
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 7.4e-59 231.5 223 54.7
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 9.6e-59 231.1 224 53.1
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 1.6e-58 230.3 239 52.7
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 1.6e-58 230.3 207 58.5
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 2.1e-58 229.9 237 52.3
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 2.1e-58 229.9 221 54.3
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 8.1e-58 228.0 227 54.2
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 1.1e-57 227.6 237 51.1
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 1.1e-57 227.6 207 58.0
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 6.9e-57 224.9 220 52.7
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 2.0e-56 223.4 230 53.9
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 2.0e-56 223.4 161 69.6
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 2.6e-56 223.0 209 56.5
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 2.5e-54 216.5 216 50.9
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 5.5e-54 215.3 216 50.0
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 5.5e-54 215.3 216 50.0
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 1.6e-53 213.8 216 50.5
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 1.6e-53 213.8 243 46.5
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 3.5e-53 212.6 216 50.0
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 4.6e-53 212.2 218 50.9
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 4.6e-53 212.2 222 53.2
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 6.0e-53 211.8 216 50.5
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 7.9e-53 211.5 216 50.0
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 7.9e-53 211.5 216 50.0
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 2.3e-52 209.9 215 49.8
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 2.3e-52 209.9 229 48.5
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 2.3e-52 209.9 223 49.8
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 6.7e-52 208.4 229 49.8
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 2.1e-50 203.4 235 49.8
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 2.8e-50 203.0 233 48.9
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 9.0e-49 198.0 215 49.3
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 1.2e-48 197.6 211 50.7
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 2.0e-48 196.8 321 38.6
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 3.8e-47 192.6 173 56.6
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 5.5e-46 188.7 185 54.1
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 9.3e-46 188.0 248 46.8
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 6.1e-45 185.3 215 46.5
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 2.3e-44 183.3 422 32.7
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 5.7e-43 178.7 211 45.0
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 2.6e-40 169.9 204 46.1
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 7.7e-40 168.3 182 51.6
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 3.8e-39 166.0 156 53.2
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 1.0e-36 157.9 159 55.3
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.5e-35 153.3 151 56.3
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 1.3e-34 151.0 143 55.9
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 1.2e-32 144.4 217 41.9
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 3.4e-32 142.9 152 51.3
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 2.9e-31 139.8 159 49.1
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 8.8e-28 128.3 126 53.2
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 1.1e-22 111.3 97 56.7
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 4.2e-22 109.4 211 32.7
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 1.5e-11 74.3 51 60.8
ECA238G4657 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.3e-10 71.2 88 44.3
Hund22393 Selenicereus undatus HOM05D007345 ORTHO05D009277 1.9e-06 57.4 54 48.1


User provided reference genes

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