Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04130 Aquilegia oxysepala HOM05D000001 ORTHO05D010365 3.8e-58 228.4 157 100.0
TAR375G0936 Trochodendron aralioides HOM05D000001 ORTHO05D010365 9.4e-25 117.5 154 64.9
Cpa.g.sc202.18 Carica papaya HOM05D000001 ORTHO05D010365 6.1e-24 114.8 148 68.2
PGR042G1072 Punica granatum HOM05D000001 ORTHO05D010365 5.2e-23 111.7 142 67.6
Dinv28913 Davidia involucrata HOM05D000001 ORTHO05D010365 1.5e-22 110.2 156 63.5
Potri.003G087300 Populus trichocarpa HOM05D000001 ORTHO05D010365 4.4e-22 108.6 143 63.6
Thecc.03G234400 Theobroma cacao HOM05D000001 ORTHO05D010365 1.3e-21 107.1 162 64.2
FvH4_5g21130 Fragaria vesca HOM05D000001 ORTHO05D010365 1.7e-21 106.7 142 66.2
FAN18G0591 Fragaria x ananassa HOM05D000001 ORTHO05D010365 1.7e-21 106.7 142 66.2
RcHm_v2.0_Chr7g0208251 Rosa chinensis HOM05D000001 ORTHO05D010365 1.7e-21 106.7 142 65.5
FAN08G2402 Fragaria x ananassa HOM05D000001 ORTHO05D010365 2.2e-21 106.3 142 66.2
Prupe.5G047200 Prunus persica HOM05D000001 ORTHO05D010365 2.2e-21 106.3 142 66.9
FAN13G1814 Fragaria x ananassa HOM05D000001 ORTHO05D010365 3.7e-21 105.5 142 66.2
CSS0045371 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D010365 8.3e-21 104.4 142 67.6
SHI21180 Sapria himalayana HOM05D000001 ORTHO05D010365 1.8e-20 103.2 154 61.7
AUR62038447 Chenopodium quinoa HOM05D000001 ORTHO05D010365 4.5e-19 98.6 162 59.3
EL10Ac5g11719 Beta vulgaris HOM05D000001 ORTHO05D010365 5.0e-18 95.1 162 57.4
QL12p007201 Quercus lobata HOM05D000001 ORTHO05D010365 1.1e-17 94.0 162 58.0
Atru.chr5.688 Acer truncatum HOM05D000001 ORTHO05D010365 1.9e-17 93.2 156 56.4
Duzib205G1362 Durio zibethinus HOM05D000001 ORTHO05D010365 1.9e-17 93.2 162 60.5
Manes.15G172600 Manihot esculenta HOM05D000001 ORTHO05D010365 3.3e-17 92.4 142 63.4
Gohir.A12G211000 Gossypium hirsutum HOM05D000001 ORTHO05D010365 5.5e-17 91.7 162 58.0
Ciclev10030784m.g Citrus clementina HOM05D000001 ORTHO05D010365 7.2e-17 91.3 153 60.1
Gohir.D12G213600 Gossypium hirsutum HOM05D000001 ORTHO05D010365 7.2e-17 91.3 162 58.0
Nn1g00635 Nelumbo nucifera HOM05D000001 ORTHO05D010365 2.1e-16 89.7 148 62.2
TWI79G0730 Tripterygium wilfordii HOM05D000001 ORTHO05D010365 8.0e-16 87.8 142 62.0
COL.COLO4_17113 Corchorus olitorius HOM05D000001 ORTHO05D010365 4.0e-15 85.5 143 60.8
Gorai.008G229200 Gossypium raimondii HOM05D000001 ORTHO05D010365 4.0e-15 85.5 162 56.8
MD06G1040900 Malus domestica HOM05D000001 ORTHO05D010365 1.5e-14 83.6 142 62.0
Psat2g174920 Pisum sativum HOM05D000001 ORTHO05D010365 5.7e-14 81.6 145 48.3
CANSAT21G2333 Cannabis sativa HOM05D000001 ORTHO05D010365 9.8e-14 80.9 142 59.9
GSVIVG01028446001 Vitis vinifera HOM05D000001 ORTHO05D010365 8.3e-13 77.8 124 64.5
Atru.chr5.693 Acer truncatum HOM05D000001 ORTHO05D010365 1.8e-12 76.6 131 61.1
Haze_13061 Corylus avellana HOM05D000001 ORTHO05D010365 3.1e-12 75.9 142 59.9
BcaC05g27280 Brassica carinata HOM05D000001 ORTHO05D010365 1.2e-11 73.9 144 45.1
C05p31880 Brassica napus HOM05D000001 ORTHO05D010365 1.2e-11 73.9 144 45.1
BolC5t31916H Brassica oleracea HOM05D000001 ORTHO05D010365 1.2e-11 73.9 144 45.1
A09p33750 Brassica napus HOM05D000001 ORTHO05D010365 2.7e-11 72.8 144 44.4
BraA09t38924Z Brassica rapa HOM05D000001 ORTHO05D010365 2.7e-11 72.8 144 44.4
Sp1g28470 Schrenkiella parvula HOM05D000001 ORTHO05D010365 5.9e-11 71.6 144 45.8
CiPaw.04G096100 Carya illinoinensis HOM05D000001 ORTHO05D010365 1.7e-10 70.1 134 58.2
CARHR031870 Cardamine hirsuta HOM05D000001 ORTHO05D010365 2.9e-10 69.3 144 32.6
Thhalv10006886m.g Eutrema salsugineum HOM05D000001 ORTHO05D010365 2.9e-10 69.3 144 46.5
BcaB07g32926 Brassica carinata HOM05D000001 ORTHO05D010365 3.8e-10 68.9 121 50.4
Lalb_Chr05g0214091 Lupinus albus HOM05D000001 ORTHO05D010365 6.6e-10 68.2 143 55.2
Eucgr.E00312 Eucalyptus grandis HOM05D000001 ORTHO05D010365 1.1e-09 67.4 124 63.7
Ca_24630_v3 Cicer arietinum L. HOM05D000001 ORTHO05D010365 1.9e-09 66.6 145 50.3
Glyma.01G201800 Glycine max HOM05D000001 ORTHO05D010365 1.9e-09 66.6 143 53.1
AT1G32415 Arabidopsis thaliana HOM05D000001 ORTHO05D010365 2.5e-09 66.2 144 42.4
Glyma.01G147900 Glycine max HOM05D000001 ORTHO05D010365 2.5e-09 66.2 143 53.1
AL1G46610 Arabidopsis lyrata HOM05D000001 ORTHO05D010365 3.3e-09 65.9 144 41.7
Lj3g0023067 Lotus japonicus HOM05D000001 ORTHO05D010365 9.5e-09 64.3 143 53.8
Glyma.20G094700 Glycine max HOM05D000001 ORTHO05D010365 1.2e-08 63.9 143 52.4
Lj3g0007465 Lotus japonicus HOM05D000001 ORTHO05D010365 2.1e-08 63.2 143 53.8
Medtr5g013950 Medicago truncatula HOM05D000001 ORTHO05D010365 2.8e-08 62.8 145 49.7
Aa31LG2G13530 Aethionema arabicum HOM05D000001 ORTHO05D010365 1.0e-07 60.8 144 49.3
TPR.G22715 Trifolium pratense HOM05D000001 ORTHO05D010365 1.8e-07 60.1 145 42.1
VMungo1215G1173 Vigna mungo HOM05D000001 ORTHO05D010365 3.0e-07 59.3 143 51.7
AagrBONN_evm.TU.Sc2ySwM_117.4041 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.0e-07 58.9 143 27.3
Phvul.002G004400 Phaseolus vulgaris HOM05D000001 ORTHO05D010365 6.8e-07 58.2 143 51.7
VMungo1215G0312 Vigna mungo HOM05D000001 ORTHO05D010365 1.2e-06 57.4 143 51.7
arahy.Tifrunner.gnm1.ann1.E9VV46 Arachis hypogaea HOM05D000001 ORTHO05D010365 1.5e-06 57.0 143 51.7
COL.COLO4_34962 Corchorus olitorius HOM05D000103 ORTHO05D000003 1.5e-06 57.0 131 28.2
Glyma.06G322500 Glycine max HOM05D000001 ORTHO05D000003 1.5e-06 57.0 137 27.7
Eucgr.C04152 Eucalyptus grandis HOM05D000001 ORTHO05D000003 2.6e-06 56.2 142 29.6
Actinidia18390 Actinidia chinensis HOM05D000001 ORTHO05D000003 3.4e-06 55.8 133 28.6
AUR62036256 Chenopodium quinoa HOM05D000001 ORTHO05D010365 3.4e-06 55.8 60 50.0
RcHm_v2.0_Chr5g0002401 Rosa chinensis HOM05D000001 ORTHO05D009952 3.4e-06 55.8 140 25.7
Eucgr.I00017 Eucalyptus grandis HOM05D000001 ORTHO05D000003 7.5e-06 54.7 141 27.0
AagrBONN_evm.TU.Sc2ySwM_368.2698 Anthoceros agrestis HOM05D000001 ORTHO05D000003 9.8e-06 54.3 114 27.2
Cfa003306 Carpinus fangiana HOM05D000001 ORTHO05D000003 9.8e-06 54.3 131 26.7
Rhsim09G0002500 Rhododendron simsii HOM05D000001 ORTHO05D000003 9.8e-06 54.3 133 25.6


User provided reference genes

Program Settings