Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03527 Aquilegia oxysepala HOM05D023242 ORTHO05D021350 5.3e-146 521.2 294 100.0
Aqoxy4G01136 Aquilegia oxysepala HOM05D023242 ORTHO05D021350 4.6e-97 358.6 211 76.8
Aqoxy6G02040 Aquilegia oxysepala HOM05D023242 ORTHO05D021350 1.9e-47 193.7 232 44.4
Aqoxy3G03532 Aquilegia oxysepala HOM05D023242 ORTHO05D021350 4.3e-47 192.6 142 98.6
Aqoxy5G02932 Aquilegia oxysepala HOM05D023242 ORTHO05D021350 2.0e-23 114.0 215 32.1
Cfa000496 Carpinus fangiana HOM05D000001 ORTHO05D000501 1.4e-13 81.3 128 35.9
Cfa000442 Carpinus fangiana HOM05D000001 ORTHO05D000501 2.4e-13 80.5 198 32.3
Aqoxy7G03498 Aquilegia oxysepala HOM05D000001 ORTHO05D021350 1.2e-12 78.2 118 37.3
Haze_04103 Corylus avellana HOM05D000001 ORTHO05D000501 3.8e-11 73.2 120 38.3
CDE07G1111 Ceratophyllum demersum HOM05D000001 ORTHO05D000501 2.5e-10 70.5 190 28.4
Gohir.D10G240800 Gossypium hirsutum HOM05D001457 ORTHO05D029816 4.2e-10 69.7 130 33.1
Migut.N00684 Erythranthe guttata HOM05D000001 ORTHO05D000501 5.5e-10 69.3 127 34.6
Oeu022759.1 Olea europaea HOM05D000001 ORTHO05D000501 1.6e-09 67.8 161 29.2
Potri.014G174400 Populus trichocarpa HOM05D000001 ORTHO05D000501 1.6e-09 67.8 224 28.1
RcHm_v2.0_Chr2g0095681 Rosa chinensis HOM05D000001 ORTHO05D016299 2.7e-09 67.0 133 30.1
SGA_v2.0_scaffold53G19344 Striga asiatica HOM05D000001 ORTHO05D000501 3.6e-09 66.6 222 24.8
RhsimUnG0138300 Rhododendron simsii HOM05D000001 ORTHO05D000501 4.7e-09 66.2 116 32.8
Haze_03549 Corylus avellana HOM05D000001 ORTHO05D000501 8.0e-09 65.5 223 27.8
FvH4_2g17310 Fragaria vesca HOM05D000001 ORTHO05D000501 8.0e-09 65.5 239 25.9
CSS0002875 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000501 1.4e-08 64.7 220 26.8
Medtr2g104300 Medicago truncatula HOM05D000001 ORTHO05D000501 1.4e-08 64.7 118 31.4
VMungo0720G1318 Vigna mungo HOM05D000001 ORTHO05D000501 1.4e-08 64.7 115 31.3
VMungo0485G0002 Vigna mungo HOM05D000001 ORTHO05D000501 1.8e-08 64.3 116 30.2
Psat4g159000 Pisum sativum HOM05D000001 ORTHO05D000501 2.3e-08 63.9 128 33.6
Ah.02g110980 Amaranthus hybridus HOM05D000001 ORTHO05D000501 3.0e-08 63.5 111 34.2
Thecc.09G278400 Theobroma cacao HOM05D008337 ORTHO05D000501 4.0e-08 63.2 191 27.2
Aqoxy3G04089 Aquilegia oxysepala HOM05D000001 ORTHO05D000501 5.2e-08 62.8 219 27.9
CAN.G736.4 Capsicum annuum HOM05D000001 ORTHO05D000501 5.2e-08 62.8 120 34.2
TWI79G0341 Tripterygium wilfordii HOM05D000001 ORTHO05D000501 5.2e-08 62.8 211 26.1
CAN.G584.32 Capsicum annuum HOM05D010663 ORTHO05D011474 6.7e-08 62.4 120 33.3
Migut.L01287 Erythranthe guttata HOM05D000001 ORTHO05D000501 6.7e-08 62.4 118 34.7
Zm00001eb144670 Zea mays HOM05D000001 ORTHO05D000501 8.8e-08 62.0 127 36.2
DCAR_018604 Daucus carota HOM05D002283 ORTHO05D005725 1.2e-07 61.6 128 32.8
EL10Ac5g10576 Beta vulgaris HOM05D000001 ORTHO05D000501 1.5e-07 61.2 84 39.3
Eucgr.H00686 Eucalyptus grandis HOM05D000001 ORTHO05D000501 1.5e-07 61.2 127 32.3
Solyc05g007940.3 Solanum lycopersicum HOM05D000001 ORTHO05D000501 1.5e-07 61.2 120 34.2
AT2G39780 Arabidopsis thaliana HOM05D000001 ORTHO05D000501 2.0e-07 60.8 124 30.6
Lalb_Chr10g0100211 Lupinus albus HOM05D000001 ORTHO05D000501 2.0e-07 60.8 125 31.2
Sp7g09390 Schrenkiella parvula HOM05D000001 ORTHO05D000501 2.6e-07 60.5 124 30.6
Peaxi162Scf00023g00239 Petunia axillaris HOM05D000001 ORTHO05D000501 3.3e-07 60.1 121 32.2
Solyc09g020110.3 Solanum lycopersicum HOM05D000001 ORTHO05D000501 3.3e-07 60.1 224 25.4
Sopen05g003790 Solanum pennellii HOM05D000001 ORTHO05D000501 3.3e-07 60.1 120 33.3
Nitab4.5_0003950g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000501 4.4e-07 59.7 123 32.5
Peaxi162Scf00222g00314 Petunia axillaris HOM05D000001 ORTHO05D000501 4.4e-07 59.7 121 32.2
TWI31G0529 Tripterygium wilfordii HOM05D000001 ORTHO05D000501 7.5e-07 58.9 210 25.2
Os01g0897300 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D000501 9.7e-07 58.5 127 33.9
Prupe.8G184700 Prunus persica HOM05D000001 ORTHO05D000501 9.7e-07 58.5 127 32.3
AUR62028630 Chenopodium quinoa HOM05D000001 ORTHO05D000501 1.3e-06 58.2 84 38.1
MSTRG.12737 Avicennia marina HOM05D000001 ORTHO05D000501 1.7e-06 57.8 124 29.8
Aqoxy3G04090 Aquilegia oxysepala HOM05D000001 ORTHO05D000501 2.2e-06 57.4 114 33.3
Os07g0629900 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D000501 2.8e-06 57.0 111 30.6
Potri.013G134400 Populus trichocarpa HOM05D000001 ORTHO05D000501 2.8e-06 57.0 120 32.5
Hund02814 Selenicereus undatus HOM05D000001 ORTHO05D000501 2.8e-06 57.0 84 36.9
Nitab4.5_0000040g0340 Nicotiana tabacum HOM05D000001 ORTHO05D000501 4.8e-06 56.2 118 32.2


User provided reference genes

Program Settings