Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 7.8e-106 387.1 192 100.0
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 9.4e-59 230.7 204 60.8
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.4e-57 226.9 203 62.1
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 4.1e-54 215.3 126 77.8
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 4.1e-54 215.3 126 77.8
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 5.3e-54 214.9 174 63.2
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 9.1e-54 214.2 186 64.0
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 9.1e-54 214.2 152 68.4
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 9.1e-54 214.2 192 57.3
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 1.2e-53 213.8 172 62.2
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.5e-53 213.4 186 64.0
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 1.5e-53 213.4 174 64.9
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 5.9e-53 211.5 190 58.9
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 5.9e-53 211.5 180 62.2
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 7.7e-53 211.1 184 62.5
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 1.3e-52 210.3 186 59.7
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.3e-52 210.3 162 67.9
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 2.2e-52 209.5 203 58.6
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 2.2e-52 209.5 184 58.7
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 3.8e-52 208.8 171 63.7
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 1.9e-51 206.5 169 60.4
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 2.5e-51 206.1 171 61.4
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 2.5e-51 206.1 159 64.8
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 3.2e-51 205.7 167 62.3
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 4.2e-51 205.3 189 57.7
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 1.2e-50 203.8 172 64.0
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.2e-50 203.8 184 59.8
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 1.6e-50 203.4 174 62.6
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 2.1e-50 203.0 167 62.9
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 2.1e-50 203.0 124 75.0
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.1e-50 203.0 113 80.5
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 2.7e-50 202.6 189 54.5
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 2.7e-50 202.6 177 58.8
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 2.7e-50 202.6 171 60.2
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 4.7e-50 201.8 169 60.9
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 6.1e-50 201.4 159 63.5
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 7.9e-50 201.1 166 61.4
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.0e-49 200.7 189 57.1
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.0e-49 200.7 172 63.4
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 1.0e-49 200.7 197 56.9
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 1.4e-49 200.3 195 56.4
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-49 199.9 172 63.4
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 1.8e-49 199.9 172 59.9
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 2.3e-49 199.5 188 56.9
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 2.3e-49 199.5 190 56.8
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 3.9e-49 198.7 166 59.6
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 3.9e-49 198.7 125 72.0
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 3.9e-49 198.7 121 76.0
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 8.8e-49 197.6 181 59.1
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 8.8e-49 197.6 197 56.3
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 1.1e-48 197.2 188 56.4
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 2.0e-48 196.4 122 73.0
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 2.0e-48 196.4 161 61.5
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 2.6e-48 196.1 160 60.6
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 3.3e-48 195.7 201 52.7
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 4.4e-48 195.3 118 72.9
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 5.7e-48 194.9 168 61.3
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 7.4e-48 194.5 163 60.1
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 7.4e-48 194.5 163 60.1
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 7.4e-48 194.5 164 59.8
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 7.4e-48 194.5 176 59.1
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 9.7e-48 194.1 163 60.1
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 9.7e-48 194.1 178 56.2
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 1.7e-47 193.4 167 59.9
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.7e-47 193.4 180 56.7
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 6.3e-47 191.4 164 58.5
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 6.3e-47 191.4 194 52.1
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 6.3e-47 191.4 169 58.0
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 8.2e-47 191.0 163 58.9
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 8.2e-47 191.0 163 58.9
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 8.2e-47 191.0 188 55.9
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 1.1e-46 190.7 116 74.1
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.1e-46 190.7 189 55.0
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 1.4e-46 190.3 196 52.6
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 1.8e-46 189.9 117 73.5
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 1.8e-46 189.9 124 70.2
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.8e-46 189.9 164 57.3
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 5.3e-46 188.3 184 55.4
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 9.1e-46 187.6 159 59.1
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 9.1e-46 187.6 162 61.7
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 2.6e-45 186.0 182 55.5
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 3.4e-45 185.7 174 59.8
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 4.5e-45 185.3 155 60.6
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 1.7e-44 183.3 167 58.1
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 1.7e-44 183.3 192 56.2
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 3.8e-44 182.2 170 57.6
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 3.8e-44 182.2 121 71.1
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 6.5e-44 181.4 210 50.0
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 1.4e-43 180.3 175 54.3
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 1.9e-43 179.9 167 57.5
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 1.2e-42 177.2 111 74.8
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 1.6e-42 176.8 190 54.2
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 8.0e-42 174.5 114 68.4
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 3.1e-38 162.5 103 68.9
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 5.3e-38 161.8 196 49.5
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 2.2e-36 156.4 164 50.6
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.5e-35 153.7 157 51.0
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 2.5e-35 152.9 124 58.9
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 1.2e-34 150.6 121 57.0
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 8.0e-34 147.9 119 56.3
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.1e-30 137.5 104 58.7
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.4e-30 137.1 139 51.1
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 2.4e-30 136.3 112 56.2
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 3.1e-30 136.0 111 55.9
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 3.1e-30 136.0 105 55.2
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 3.1e-30 136.0 112 54.5
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 4.1e-30 135.6 103 61.2
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 4.1e-30 135.6 124 54.8
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 5.3e-30 135.2 182 41.2
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 5.3e-30 135.2 105 58.1
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 7.0e-30 134.8 106 56.6
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 9.1e-30 134.4 106 56.6
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 1.2e-29 134.0 106 56.6
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 2.0e-29 133.3 105 56.2
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 2.0e-29 133.3 103 57.3
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 3.5e-29 132.5 105 56.2
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 3.5e-29 132.5 110 55.5
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 5.9e-29 131.7 105 55.2
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.0e-28 131.0 167 44.9
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 1.0e-28 131.0 171 43.9
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 1.7e-28 130.2 103 58.3
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.7e-28 130.2 147 45.6
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 2.2e-28 129.8 106 53.8
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.9e-28 129.4 103 56.3
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 3.8e-28 129.0 168 44.6
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 5.0e-28 128.6 150 44.7
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 6.5e-28 128.3 173 42.2
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 8.5e-28 127.9 108 56.5
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.1e-27 127.5 112 50.9
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 1.1e-27 127.5 174 40.8
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 2.5e-27 126.3 150 48.7
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 2.5e-27 126.3 105 54.3
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.5e-27 126.3 105 54.3
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.5e-27 126.3 111 51.4
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 3.2e-27 125.9 138 49.3
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 4.2e-27 125.6 64 84.4
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 4.2e-27 125.6 65 83.1
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 9.4e-27 124.4 162 43.2
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.6e-26 123.6 167 43.7
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.1e-26 123.2 165 37.0
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 2.1e-26 123.2 103 53.4
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.7e-26 122.1 164 42.1
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 6.1e-26 121.7 125 46.4
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 1.8e-25 120.2 173 39.3
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.8e-25 120.2 100 57.0
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 2.3e-25 119.8 123 46.3
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.5e-24 117.1 137 43.1
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 1.5e-24 117.1 159 40.3
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 3.4e-24 115.9 159 41.5
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 1.3e-23 114.0 96 55.2
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 1.3e-23 114.0 130 43.8
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 2.8e-23 112.8 161 39.8
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 3.7e-23 112.5 108 52.8
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.1e-22 110.9 106 46.2
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.4e-22 110.5 166 40.4
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.8e-22 110.2 124 44.4
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 1.8e-22 110.2 112 47.3
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 5.4e-22 108.6 65 73.8
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 7.0e-22 108.2 58 77.6
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.3e-20 104.0 123 43.9
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.3e-20 104.0 123 43.9
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.5e-19 100.5 98 54.1
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 8.0e-18 94.7 245 29.4
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 1.2e-16 90.9 105 43.8
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 9.8e-16 87.8 91 45.1
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 1.3e-15 87.4 119 40.3
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 3.7e-15 85.9 268 26.9
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 3.7e-15 85.9 59 59.3
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 2.8e-10 69.7 104 45.2
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 4.7e-10 68.9 75 44.0
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 2.0e-08 63.5 59 55.9
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 3.4e-08 62.8 58 55.2
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 3.7e-07 59.3 48 56.2


User provided reference genes

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