Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02552 Aquilegia oxysepala HOM05D021074 ORTHO05D015891 3.8e-57 224.6 108 100.0
Nn2g11530 Nelumbo nucifera HOM05D000329 ORTHO05D002132 1.3e-17 93.2 67 59.7
Aqoxy1G01193 Aquilegia oxysepala HOM05D000329 ORTHO05D002132 7.2e-16 87.4 50 82.0
TAR623G1282 Trochodendron aralioides HOM05D000329 ORTHO05D002132 2.7e-15 85.5 71 54.9
TWI15G1243 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 8.0e-15 84.0 71 53.5
Lj2A16T73 Lonicera japonica HOM05D000329 ORTHO05D002132 1.4e-14 83.2 66 57.6
CSS0002547 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D002132 3.0e-14 82.0 70 51.4
Ca_10556_v3 Cicer arietinum L. HOM05D000329 ORTHO05D002132 1.1e-13 80.1 67 50.7
Glyma.20G181000 Glycine max HOM05D000329 ORTHO05D002132 3.3e-13 78.6 67 50.7
CANSAT56G4152 Cannabis sativa HOM05D000329 ORTHO05D002132 4.4e-13 78.2 67 49.3
Sed0001069 Sechium edule HOM05D000329 ORTHO05D002132 4.4e-13 78.2 71 47.9
Psat6g182440 Pisum sativum HOM05D000329 ORTHO05D002132 9.7e-13 77.0 67 46.3
Potri.010G224700 Populus trichocarpa HOM05D000329 ORTHO05D002132 2.2e-12 75.9 67 47.8
Potri.008G037800 Populus trichocarpa HOM05D000329 ORTHO05D002132 3.7e-12 75.1 67 49.3
CsaV3_6G036580 Cucumis sativus L. HOM05D000329 ORTHO05D002132 8.2e-12 73.9 68 47.1
arahy.Tifrunner.gnm1.ann1.5T63VN Arachis hypogaea HOM05D000329 ORTHO05D002132 1.1e-11 73.6 72 45.8
Lj5g0007464 Lotus japonicus HOM05D000329 ORTHO05D002132 1.1e-11 73.6 67 47.8
ClCG08G007610 Citrullus lanatus HOM05D000329 ORTHO05D002132 4.1e-11 71.6 68 48.5
FAN10G1428 Fragaria x ananassa HOM05D000329 ORTHO05D002132 7.0e-11 70.9 68 47.1
Medtr1g094740 Medicago truncatula HOM05D000329 ORTHO05D002132 7.0e-11 70.9 67 43.3
PSO339G4719 Papaver somniferum HOM05D000329 ORTHO05D002132 7.0e-11 70.9 71 45.1
arahy.Tifrunner.gnm1.ann1.Z1XI1M Arachis hypogaea HOM05D000329 ORTHO05D002132 9.1e-11 70.5 72 44.4
EL10Ac6g14200 Beta vulgaris HOM05D000329 ORTHO05D002132 1.2e-10 70.1 67 47.8
MELO3C019813.2 Cucumis melo HOM05D000329 ORTHO05D002132 1.2e-10 70.1 68 48.5
Sabra10G0173700 Salix brachista HOM05D000329 ORTHO05D002132 2.0e-10 69.3 67 44.8
THA.LOC104816419 Tarenaya hassleriana HOM05D000329 ORTHO05D002132 2.0e-10 69.3 71 45.1
PSO063G2159 Papaver somniferum HOM05D000329 ORTHO05D002132 3.5e-10 68.6 71 43.7
GSVIVG01007564001 Vitis vinifera HOM05D000329 ORTHO05D002132 5.9e-10 67.8 74 43.2
SEGI_26590 Sequoiadendron giganteum HOM05D000329 ORTHO05D002132 7.7e-10 67.4 44 61.4
TWI39G0078 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 7.7e-10 67.4 75 46.7
TPR.G1943 Trifolium pratense HOM05D000329 ORTHO05D002132 1.3e-09 66.6 45 60.0
TWI09G0874 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 2.9e-09 65.5 75 45.3
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 5.0e-09 64.7 72 48.6
Cc02_g11210 Coffea canephora HOM05D000329 ORTHO05D002132 6.5e-09 64.3 67 43.3
DCAR_015294 Daucus carota HOM05D000329 ORTHO05D002132 1.1e-08 63.5 49 49.0
SEGI_01288 Sequoiadendron giganteum HOM05D000329 ORTHO05D015891 1.1e-08 63.5 69 44.9
TWI63G1719 Tripterygium wilfordii HOM05D000329 ORTHO05D002132 1.1e-08 63.5 72 45.8
Lj4g0026894 Lotus japonicus HOM05D000329 ORTHO05D002132 1.5e-08 63.2 44 59.1
MD14G1165600 Malus domestica HOM05D000329 ORTHO05D002132 1.9e-08 62.8 74 44.6
Oeu031330.1 Olea europaea HOM05D000329 ORTHO05D002132 4.2e-08 61.6 67 38.8
ATR0680G118 Amborella trichopoda HOM05D000329 ORTHO05D002132 5.5e-08 61.2 44 56.8
Aqoxy5G03611 Aquilegia oxysepala HOM05D000329 ORTHO05D002132 5.5e-08 61.2 70 41.4
MSTRG.8139 Avicennia marina HOM05D000329 ORTHO05D002132 5.5e-08 61.2 69 40.6
Carub.0006s0319 Capsella rubella HOM05D000329 ORTHO05D002132 7.2e-08 60.8 67 41.8
Cpa.g.sc53.94 Carica papaya HOM05D000329 ORTHO05D002132 7.2e-08 60.8 53 49.1
CDE04G2798 Ceratophyllum demersum HOM05D000329 ORTHO05D002132 7.2e-08 60.8 67 43.3
Duzib084G0575 Durio zibethinus HOM05D000329 ORTHO05D002132 7.2e-08 60.8 52 50.0
FAN04G3077 Fragaria x ananassa HOM05D000329 ORTHO05D002132 7.2e-08 60.8 42 59.5
Thecc.03G121300 Theobroma cacao HOM05D000329 ORTHO05D002132 7.2e-08 60.8 44 54.5
Dinv38483 Davidia involucrata HOM05D000329 ORTHO05D002132 9.4e-08 60.5 44 52.3
FvH4_5g07090 Fragaria vesca HOM05D000329 ORTHO05D002132 1.2e-07 60.1 42 59.5
FAN08G1572 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.2e-07 60.1 42 59.5
FAN18G2482 Fragaria x ananassa HOM05D000329 ORTHO05D002132 1.2e-07 60.1 42 59.5
Gohir.A09G244800 Gossypium hirsutum HOM05D000329 ORTHO05D002132 1.2e-07 60.1 44 52.3
Gohir.D09G245700 Gossypium hirsutum HOM05D000329 ORTHO05D002132 1.2e-07 60.1 68 41.2
Gorai.006G270100 Gossypium raimondii HOM05D000329 ORTHO05D002132 1.2e-07 60.1 71 39.4
Oeu023470.1 Olea europaea HOM05D000329 ORTHO05D002132 1.2e-07 60.1 60 48.3
Prupe.5G159200 Prunus persica HOM05D000329 ORTHO05D002132 1.2e-07 60.1 74 43.2
RcHm_v2.0_Chr7g0191461 Rosa chinensis HOM05D000329 ORTHO05D002132 1.2e-07 60.1 42 57.1
Ciclev10018473m.g Citrus clementina HOM05D000329 ORTHO05D002132 1.6e-07 59.7 77 40.3
Eucgr.K02763 Eucalyptus grandis HOM05D000329 ORTHO05D002132 1.6e-07 59.7 44 52.3
Os01g0907400 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D002132 1.6e-07 59.7 44 54.5
THA.LOC104821500 Tarenaya hassleriana HOM05D000329 ORTHO05D002132 1.6e-07 59.7 45 51.1
Os03g0148800 Oryza sativa ssp. japonica HOM05D021074 ORTHO05D015891 2.1e-07 59.3 64 43.8
SGA_v2.0_scaffold19G08825 Striga asiatica HOM05D000329 ORTHO05D002132 2.1e-07 59.3 66 40.9
AUR62001265 Chenopodium quinoa HOM05D000329 ORTHO05D002132 2.7e-07 58.9 43 53.5
AUR62014263 Chenopodium quinoa HOM05D000329 ORTHO05D002132 2.7e-07 58.9 67 43.3
MSTRG.22937 Avicennia marina HOM05D000329 ORTHO05D002132 3.6e-07 58.5 67 43.3
FAN13G2326 Fragaria x ananassa HOM05D000329 ORTHO05D002132 3.6e-07 58.5 42 57.1
AUR62038483 Chenopodium quinoa HOM05D000329 ORTHO05D002132 4.7e-07 58.2 67 43.3
Pp3c7_8710 Physcomitrium patens HOM05D000329 ORTHO05D002132 4.7e-07 58.2 69 42.0
Rhsim03G0118700 Rhododendron simsii HOM05D000329 ORTHO05D002132 8.0e-07 57.4 66 40.9
SMO361G0193 Selaginella moellendorffii HOM05D000329 ORTHO05D002132 8.0e-07 57.4 46 50.0
SMO361G0386 Selaginella moellendorffii HOM05D000329 ORTHO05D002132 8.0e-07 57.4 46 50.0
SGA_v2.0_scaffold2G01369 Striga asiatica HOM05D000329 ORTHO05D002132 8.0e-07 57.4 69 39.1
Pp3c11_24630 Physcomitrium patens HOM05D000329 ORTHO05D002132 1.0e-06 57.0 74 39.2
unitig_26.g9676 Utricularia gibba HOM05D000329 ORTHO05D002132 1.0e-06 57.0 71 36.6
HPP92_013548 Vanilla planifolia HOM05D000329 ORTHO05D002132 1.4e-06 56.6 69 42.0
Dinv31305 Davidia involucrata HOM05D000329 ORTHO05D002132 2.3e-06 55.8 71 38.0
Lsat_1_v5_gn_1_28420 Lactuca sativa HOM05D000329 ORTHO05D002132 2.3e-06 55.8 42 52.4
Oeu045488.1 Olea europaea HOM05D000329 ORTHO05D002132 2.3e-06 55.8 57 40.4
Os12g0279100 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D002132 2.3e-06 55.8 42 52.4
Zm00001eb403020 Zea mays HOM05D021074 ORTHO05D015891 2.3e-06 55.8 55 47.3
Zm00001eb003900 Zea mays HOM05D021074 ORTHO05D015891 3.0e-06 55.5 54 46.3
Gorai.009G313100 Gossypium raimondii HOM05D000329 ORTHO05D002132 4.0e-06 55.1 44 50.0
Zm00001eb403060 Zea mays HOM05D000329 ORTHO05D002132 4.0e-06 55.1 42 57.1
Os03g0151300 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D002132 5.2e-06 54.7 57 47.4
Glyma.10G209600 Glycine max HOM05D000329 ORTHO05D002132 6.7e-06 54.3 51 45.1
Nitab4.5_0000064g0060 Nicotiana tabacum HOM05D000329 ORTHO05D002132 6.7e-06 54.3 67 40.3


User provided reference genes

Program Settings