Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02231 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 8.1e-134 480.3 229 100.0
Aqoxy3G02588 Aquilegia oxysepala HOM05D001092 ORTHO05D000923 2.7e-65 252.7 491 36.7
Oeu035103.1 Olea europaea HOM05D001092 ORTHO05D000923 2.5e-42 176.4 209 45.9
Nn1g00699 Nelumbo nucifera HOM05D001092 ORTHO05D000923 4.0e-40 169.1 203 46.8
Dinv28897 Davidia involucrata HOM05D001092 ORTHO05D000923 7.5e-39 164.9 209 44.0
QL12p007950 Quercus lobata HOM05D001092 ORTHO05D000923 4.1e-37 159.1 219 41.1
Rhsim11G0008500 Rhododendron simsii HOM05D001092 ORTHO05D000923 4.1e-37 159.1 215 41.4
Nitab4.5_0001255g0080 Nicotiana tabacum HOM05D001092 ORTHO05D000923 1.2e-36 157.5 195 44.1
Solyc08g077500.4 Solanum lycopersicum HOM05D001092 ORTHO05D000923 2.0e-36 156.8 204 43.6
Sopen08g026080 Solanum pennellii HOM05D001092 ORTHO05D000923 2.0e-36 156.8 204 43.6
Lj2A251T58 Lonicera japonica HOM05D001092 ORTHO05D000923 2.7e-36 156.4 211 44.1
Nitab4.5_0006135g0030 Nicotiana tabacum HOM05D001092 ORTHO05D000923 2.7e-36 156.4 186 45.7
PSO063G3710 Papaver somniferum HOM05D001092 ORTHO05D000923 2.7e-36 156.4 209 41.1
Peaxi162Scf00084g00118 Petunia axillaris HOM05D001092 ORTHO05D000923 1.0e-35 154.5 203 43.3
CiPaw.12G058300 Carya illinoinensis HOM05D001092 ORTHO05D000923 1.3e-35 154.1 146 50.7
Actinidia25929 Actinidia chinensis HOM05D001092 ORTHO05D000923 2.3e-35 153.3 212 40.6
MBI04_g20743_MAGBIO Magnolia biondii HOM05D001092 ORTHO05D000923 2.3e-35 153.3 223 42.2
Prupe.5G050700 Prunus persica HOM05D001092 ORTHO05D000923 3.9e-35 152.5 219 41.1
DCAR_000729 Daucus carota HOM05D001092 ORTHO05D000923 1.5e-34 150.6 199 41.7
FAN08G1156 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.9e-34 150.2 199 42.7
Atru.chr9.1144 Acer truncatum HOM05D001092 ORTHO05D000923 3.3e-34 149.4 209 41.1
RcHm_v2.0_Chr7g0207821 Rosa chinensis HOM05D001092 ORTHO05D000923 4.3e-34 149.1 199 42.7
FAN04G0578 Fragaria x ananassa HOM05D001092 ORTHO05D000923 7.3e-34 148.3 199 41.7
Migut.E00810 Erythranthe guttata HOM05D001092 ORTHO05D000923 1.2e-33 147.5 244 38.1
Cc08_g01550 Coffea canephora HOM05D001092 ORTHO05D000923 2.8e-33 146.4 235 37.0
FvH4_5g20820 Fragaria vesca HOM05D001092 ORTHO05D000923 3.6e-33 146.0 199 41.7
ClCG09G012520 Citrullus lanatus HOM05D001092 ORTHO05D000923 4.7e-33 145.6 218 37.6
HPP92_014878 Vanilla planifolia HOM05D001092 ORTHO05D000923 4.7e-33 145.6 213 39.0
Manes.17G019783 Manihot esculenta HOM05D001092 ORTHO05D000923 6.2e-33 145.2 180 46.1
Thecc.03G236900 Theobroma cacao HOM05D001092 ORTHO05D000923 8.0e-33 144.8 225 40.9
FAN18G3751 Fragaria x ananassa HOM05D001092 ORTHO05D000923 1.1e-32 144.4 199 41.2
TWI60G0589 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 1.1e-32 144.4 197 41.1
MD04G1057200 Malus domestica HOM05D001092 ORTHO05D000923 1.4e-32 144.1 184 44.6
MSTRG.1961 Avicennia marina HOM05D001092 ORTHO05D000923 3.1e-32 142.9 209 39.2
GSVIVG01013270001 Vitis vinifera HOM05D001092 ORTHO05D000923 3.1e-32 142.9 214 41.1
Haze_08331 Corylus avellana HOM05D001092 ORTHO05D000923 4.0e-32 142.5 212 40.6
MD06G1043800 Malus domestica HOM05D001092 ORTHO05D000923 4.0e-32 142.5 184 44.6
Eucgr.D02142 Eucalyptus grandis HOM05D001092 ORTHO05D000923 5.2e-32 142.1 199 40.2
Sed0007068 Sechium edule HOM05D001092 ORTHO05D000923 6.8e-32 141.7 219 37.0
EL10Ac5g12216 Beta vulgaris HOM05D001092 ORTHO05D000923 8.9e-32 141.4 212 38.7
Cfa012359 Carpinus fangiana HOM05D001092 ORTHO05D000923 8.9e-32 141.4 212 40.1
COL.COLO4_06704 Corchorus olitorius HOM05D001092 ORTHO05D000923 1.5e-31 140.6 189 43.4
Duzib205G0058 Durio zibethinus HOM05D001092 ORTHO05D000923 1.5e-31 140.6 216 41.2
Medtr5g013780 Medicago truncatula HOM05D001092 ORTHO05D000923 9.8e-31 137.9 192 41.7
Psat2g175240 Pisum sativum HOM05D001092 ORTHO05D000923 3.7e-30 136.0 195 40.0
Sabra01G0118800 Salix brachista HOM05D001092 ORTHO05D000923 3.7e-30 136.0 218 38.1
Glyma.11G039900 Glycine max HOM05D001092 ORTHO05D000923 4.9e-30 135.6 191 39.8
Ca_26022_v3 Cicer arietinum L. HOM05D001092 ORTHO05D000923 6.4e-30 135.2 192 39.6
Potri.001G148800 Populus trichocarpa HOM05D001092 ORTHO05D000923 8.3e-30 134.8 219 36.5
Lalb_Chr16g0379281 Lupinus albus HOM05D001092 ORTHO05D000923 1.1e-29 134.4 195 40.0
Sc07g0009000 Simmondsia chinensis HOM05D001092 ORTHO05D000923 1.1e-29 134.4 200 40.5
MELO3C003359.2 Cucumis melo HOM05D001092 ORTHO05D000923 2.4e-29 133.3 219 37.0
CsaV3_3G049680 Cucumis sativus L. HOM05D001092 ORTHO05D000923 2.4e-29 133.3 189 40.2
arahy.Tifrunner.gnm1.ann1.G3NGVJ Arachis hypogaea HOM05D001092 ORTHO05D000923 3.2e-29 132.9 182 41.8
arahy.Tifrunner.gnm1.ann1.PHJ2IJ Arachis hypogaea HOM05D001092 ORTHO05D000923 3.2e-29 132.9 182 41.8
TPR.G33938 Trifolium pratense HOM05D001092 ORTHO05D000923 3.2e-29 132.9 192 39.6
AUR62018801 Chenopodium quinoa HOM05D001092 ORTHO05D000923 4.1e-29 132.5 215 39.5
Gohir.D03G169100 Gossypium hirsutum HOM05D001092 ORTHO05D000923 1.2e-28 131.0 179 43.0
Gorai.003G179200 Gossypium raimondii HOM05D001092 ORTHO05D000923 1.2e-28 131.0 179 43.0
PGR031G0629 Punica granatum HOM05D001092 ORTHO05D000923 1.6e-28 130.6 191 39.3
AUR62007201 Chenopodium quinoa HOM05D001092 ORTHO05D000923 3.5e-28 129.4 212 39.2
Phvul.002G003000 Phaseolus vulgaris HOM05D001092 ORTHO05D000923 3.5e-28 129.4 191 37.7
Gohir.A03G003300 Gossypium hirsutum HOM05D001092 ORTHO05D000923 4.6e-28 129.0 179 43.0
VMungo1215G1951 Vigna mungo HOM05D001092 ORTHO05D000923 7.8e-28 128.3 183 40.4
Gohir.A08G161600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 2.3e-27 126.7 178 42.1
Gohir.D08G181600 Gossypium hirsutum HOM05D001092 ORTHO05D000923 2.3e-27 126.7 178 42.1
Gorai.004G190500 Gossypium raimondii HOM05D001092 ORTHO05D000923 2.3e-27 126.7 178 42.1
Hund14463 Selenicereus undatus HOM05D001092 ORTHO05D000923 8.6e-27 124.8 196 39.3
Lj2g0026983 Lotus japonicus HOM05D001092 ORTHO05D000923 1.1e-26 124.4 191 38.2
ATR0829G162 Amborella trichopoda HOM05D001092 ORTHO05D000923 5.2e-24 115.5 191 34.6
SHI07573 Sapria himalayana HOM05D001092 ORTHO05D000923 1.1e-21 107.8 140 41.4
Cpa.g.sc98.44 Carica papaya HOM05D001092 ORTHO05D000923 4.1e-21 105.9 326 30.1
HPP92_014922 Vanilla planifolia HOM05D001092 ORTHO05D000923 2.1e-20 103.6 188 34.0
Ah.12g053800 Amaranthus hybridus HOM05D001092 ORTHO05D000923 3.5e-20 102.8 129 49.6
Carub.0007s2427 Capsella rubella HOM05D001092 ORTHO05D000923 3.5e-20 102.8 77 63.6
SEGI_02242 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 4.6e-20 102.4 196 33.2
Lsat_1_v5_gn_0_35581 Lactuca sativa HOM05D001092 ORTHO05D000923 6.0e-20 102.1 285 30.5
AL7G37590 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 7.8e-20 101.7 77 63.6
CANSAT21G2480 Cannabis sativa HOM05D001092 ORTHO05D000923 1.0e-19 101.3 81 60.5
Aa31LG2G13220 Aethionema arabicum HOM05D001092 ORTHO05D000923 1.3e-19 100.9 87 62.1
AT4G17140 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 1.7e-19 100.5 77 62.3
CARHR223710 Cardamine hirsuta HOM05D001092 ORTHO05D000923 3.9e-19 99.4 77 61.0
THA.LOC104814451 Tarenaya hassleriana HOM05D001092 ORTHO05D000923 5.1e-19 99.0 77 64.9
Sp7g17050 Schrenkiella parvula HOM05D001092 ORTHO05D000923 6.6e-19 98.6 77 62.3
ECA246G3294 Erigeron canadensis HOM05D001092 ORTHO05D000923 8.6e-19 98.2 78 64.1
Thhalv10024176m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 8.6e-19 98.2 72 63.9
BolC8t48437H Brassica oleracea HOM05D001092 ORTHO05D000923 1.9e-18 97.1 72 63.9
BraA08t33273Z Brassica rapa HOM05D001092 ORTHO05D000923 1.9e-18 97.1 72 63.9
Lsat_1_v5_gn_3_15901 Lactuca sativa HOM05D001092 ORTHO05D000923 1.9e-18 97.1 80 58.8
Ciclev10018424m.g Citrus clementina HOM05D001092 ORTHO05D000923 5.6e-18 95.5 81 63.0
HanXRQChr17g0535661 Helianthus annuus HOM05D001092 ORTHO05D000923 7.3e-18 95.1 78 64.1
Lsat_1_v5_gn_2_105500 Lactuca sativa HOM05D001092 ORTHO05D000923 1.2e-17 94.4 80 57.5
SGA_v2.0_scaffold20G09243 Striga asiatica HOM05D001092 ORTHO05D000923 2.1e-17 93.6 81 56.8
Zm00001eb390790 Zea mays HOM05D001092 ORTHO05D000923 8.9e-16 88.2 70 60.0
CDE02G4159 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 2.9e-14 83.2 158 31.6
Mapoly0105s0039 Marchantia polymorpha HOM05D001092 ORTHO05D000923 5.6e-10 68.9 179 26.3
Actinidia03405 Actinidia chinensis HOM05D001092 ORTHO05D000923 1.3e-09 67.8 39 64.1
Pp3c22_21110 Physcomitrium patens HOM05D001092 ORTHO05D000923 1.6e-09 67.4 178 29.2
Pp3c18_1370 Physcomitrium patens HOM05D001092 ORTHO05D000923 4.8e-09 65.9 188 28.2
Pp3c18_1376 Physcomitrium patens HOM05D001092 ORTHO05D000923 4.8e-09 65.9 188 28.2
Mapoly0076s0037 Marchantia polymorpha HOM05D001092 ORTHO05D000923 3.8e-06 56.2 170 25.9
SEGI_16723 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 4.9e-06 55.8 58 41.4
SEGI_33370 Sequoiadendron giganteum HOM05D001092 ORTHO05D000923 4.9e-06 55.8 58 41.4


User provided reference genes

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