Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01857 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 1.2e-56 223.0 114 100.0
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 1.3e-52 209.5 109 98.2
Aqoxy5G02405 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 1.3e-52 209.5 109 98.2
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 2.0e-45 185.7 104 86.5
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 2.0e-45 185.7 104 86.5
Nn7g35984 Nelumbo nucifera HOM05D004629 ORTHO05D006604 3.5e-45 184.9 104 87.5
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 7.8e-45 183.7 104 85.6
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 1.7e-44 182.6 104 87.5
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 2.3e-44 182.2 103 85.4
Cpa.g.sc119.97 Carica papaya HOM05D004629 ORTHO05D006604 5.0e-44 181.0 104 85.6
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 5.0e-44 181.0 104 84.6
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 5.0e-44 181.0 104 85.6
Nn2g15715 Nelumbo nucifera HOM05D004629 ORTHO05D019743 6.6e-44 180.6 103 85.4
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 1.1e-43 179.9 104 83.7
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 1.5e-43 179.5 104 83.7
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 1.9e-43 179.1 104 84.6
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 3.3e-43 178.3 104 85.6
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 3.3e-43 178.3 104 83.7
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 4.3e-43 177.9 104 82.7
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 7.3e-43 177.2 104 82.7
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 7.3e-43 177.2 104 82.7
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 7.3e-43 177.2 104 82.7
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 9.5e-43 176.8 104 82.7
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 9.5e-43 176.8 104 82.7
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 9.5e-43 176.8 104 82.7
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 1.2e-42 176.4 104 83.7
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 1.6e-42 176.0 103 82.5
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 1.6e-42 176.0 104 84.6
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 1.6e-42 176.0 104 81.7
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 2.1e-42 175.6 105 82.9
Lj2A677G23 Lonicera japonica HOM05D004629 ORTHO05D006604 2.1e-42 175.6 104 82.7
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 2.1e-42 175.6 104 81.7
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 2.8e-42 175.3 104 81.7
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 2.8e-42 175.3 106 81.1
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 3.6e-42 174.9 105 82.9
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 3.6e-42 174.9 102 83.3
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 3.6e-42 174.9 104 81.7
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 3.6e-42 174.9 104 81.7
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 4.7e-42 174.5 104 82.7
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 4.7e-42 174.5 104 79.8
Actinidia39366 Actinidia chinensis HOM05D004629 ORTHO05D006604 6.2e-42 174.1 104 82.7
Glyma.10G112700 Glycine max HOM05D004629 ORTHO05D006604 6.2e-42 174.1 103 81.6
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 6.2e-42 174.1 108 76.9
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 6.2e-42 174.1 101 84.2
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 6.2e-42 174.1 101 84.2
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 1.1e-41 173.3 104 80.8
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 1.1e-41 173.3 101 83.2
FvH4_3g44470 Fragaria vesca HOM05D004629 ORTHO05D006604 1.1e-41 173.3 104 82.7
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.1e-41 173.3 104 82.7
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.1e-41 173.3 104 82.7
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 1.1e-41 173.3 104 82.7
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 1.1e-41 173.3 109 78.0
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 1.4e-41 172.9 104 78.8
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 1.4e-41 172.9 105 79.0
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 1.4e-41 172.9 99 84.8
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 1.4e-41 172.9 99 83.8
CDE05G1698 Ceratophyllum demersum HOM05D004635 ORTHO05D005899 1.8e-41 172.6 104 78.8
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 1.8e-41 172.6 105 81.9
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 2.3e-41 172.2 104 81.7
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 3.1e-41 171.8 109 76.1
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 3.1e-41 171.8 109 76.1
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 3.1e-41 171.8 102 81.4
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 3.1e-41 171.8 104 81.7
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 3.1e-41 171.8 103 80.6
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 4.0e-41 171.4 103 80.6
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 4.0e-41 171.4 101 82.2
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 5.2e-41 171.0 104 78.8
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 5.2e-41 171.0 101 82.2
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 5.2e-41 171.0 106 77.4
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 6.8e-41 170.6 101 81.2
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 8.9e-41 170.2 104 79.8
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 8.9e-41 170.2 104 79.8
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 1.2e-40 169.9 102 80.4
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 1.5e-40 169.5 102 80.4
BcaB02g11149 Brassica carinata HOM05D004629 ORTHO05D006604 1.5e-40 169.5 98 83.7
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 1.5e-40 169.5 108 78.7
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 1.5e-40 169.5 98 83.7
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 1.5e-40 169.5 98 83.7
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 1.5e-40 169.5 100 82.0
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 1.5e-40 169.5 98 83.7
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 1.5e-40 169.5 98 83.7
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 1.5e-40 169.5 98 83.7
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 1.5e-40 169.5 98 83.7
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 1.5e-40 169.5 98 83.7
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 1.5e-40 169.5 105 79.0
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 1.5e-40 169.5 105 79.0
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 2.0e-40 169.1 98 83.7
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 2.6e-40 168.7 98 82.7
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 3.4e-40 168.3 98 82.7
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 3.4e-40 168.3 100 82.0
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 3.4e-40 168.3 100 81.0
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 3.4e-40 168.3 102 77.5
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 4.4e-40 167.9 98 81.6
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 4.4e-40 167.9 98 82.7
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 4.4e-40 167.9 102 82.4
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 4.4e-40 167.9 104 78.8
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 5.8e-40 167.5 108 77.8
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 5.8e-40 167.5 108 77.8
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 5.8e-40 167.5 108 77.8
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 5.8e-40 167.5 102 79.4
Psat2g086520 Pisum sativum HOM05D004629 ORTHO05D006604 7.5e-40 167.2 99 78.8
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 7.5e-40 167.2 103 78.6
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 9.8e-40 166.8 98 82.7
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 1.3e-39 166.4 101 80.2
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 1.3e-39 166.4 103 77.7
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 1.7e-39 166.0 103 77.7
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 2.9e-39 165.2 105 76.2
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 3.7e-39 164.9 101 79.2
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 1.4e-38 162.9 96 80.2
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 5.4e-38 161.0 96 81.2
CDE05G0953 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 7.1e-38 160.6 104 75.0
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 1.6e-37 159.5 102 74.5
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 4.6e-37 157.9 96 81.2
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 4.6e-37 157.9 114 71.9
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 7.8e-37 157.1 104 76.9
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 1.7e-36 156.0 96 76.0
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 5.1e-36 154.5 102 71.6
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 1.6e-34 149.4 99 72.7
unitig_22.g5472 Utricularia gibba HOM05D004629 ORTHO05D006604 1.8e-33 146.0 125 61.6
DCAR_017261 Daucus carota HOM05D004629 ORTHO05D006604 1.2e-32 143.3 89 77.5
AagrBONN_evm.TU.Sc2ySwM_117.3293 Anthoceros agrestis HOM05D004629 ORTHO05D006604 3.4e-32 141.7 101 70.3
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 2.5e-27 125.6 99 65.7
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 1.6e-26 122.9 96 64.6
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 1.5e-24 116.3 99 61.6
Thecc.10G098800 Theobroma cacao HOM05D004629 ORTHO05D006604 1.4e-22 109.8 70 72.9
Cfa022255 Carpinus fangiana HOM05D004629 ORTHO05D006604 5.1e-20 101.3 100 49.0
MCO09G252 Micromonas commoda HOM05D004629 ORTHO05D006604 3.3e-19 98.6 101 52.5
CAN.G8813.1 Capsicum annuum HOM05D004629 ORTHO05D006604 6.2e-18 94.4 70 65.7
Haze_26090 Corylus avellana HOM05D004629 ORTHO05D006604 1.1e-17 93.6 100 51.0
Nitab4.5_0008074g0010 Nicotiana tabacum HOM05D004629 ORTHO05D006604 4.9e-15 84.7 50 76.0
Aqoxy2G02051 Aquilegia oxysepala HOM05D004629 ORTHO05D004559 2.4e-14 82.4 56 69.6
Sabra01G0008400 Salix brachista HOM05D004629 ORTHO05D023587 1.4e-09 66.6 77 50.6


User provided reference genes

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