Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01789 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 4.2e-59 231.9 119 100.0
CDE06G1494 Ceratophyllum demersum HOM05D006285 ORTHO05D007249 8.6e-12 74.7 100 48.0
CiPaw.05G103600 Carya illinoinensis HOM05D006285 ORTHO05D007249 2.5e-11 73.2 116 47.4
CiPaw.06G107800 Carya illinoinensis HOM05D006285 ORTHO05D007249 4.3e-11 72.4 107 49.5
Gohir.D02G174500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 9.5e-11 71.2 122 42.6
Gorai.005G196200 Gossypium raimondii HOM05D006285 ORTHO05D007249 9.5e-11 71.2 122 42.6
TWI18G1468 Tripterygium wilfordii HOM05D006285 ORTHO05D007249 1.2e-10 70.9 120 45.0
Gohir.A03G151500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 2.1e-10 70.1 122 42.6
Manes.09G186200 Manihot esculenta HOM05D006285 ORTHO05D007249 2.1e-10 70.1 111 43.2
Potri.003G165000 Populus trichocarpa HOM05D006285 ORTHO05D007249 2.1e-10 70.1 81 50.6
Sed0027998 Sechium edule HOM05D006285 ORTHO05D007249 8.0e-10 68.2 89 50.6
ATR0582G164 Amborella trichopoda HOM05D006285 ORTHO05D007249 1.0e-09 67.8 90 48.9
Haze_12478 Corylus avellana HOM05D006285 ORTHO05D007249 1.0e-09 67.8 93 48.4
MD16G1127400 Malus domestica HOM05D006285 ORTHO05D007249 1.8e-09 67.0 104 41.3
QL03p050117 Quercus lobata HOM05D006285 ORTHO05D007249 1.8e-09 67.0 95 45.3
Cfa009427 Carpinus fangiana HOM05D006285 ORTHO05D007249 2.3e-09 66.6 101 44.6
Ciclev10032858m.g Citrus clementina HOM05D006285 ORTHO05D007249 2.3e-09 66.6 83 48.2
Atru.chr11.2411 Acer truncatum HOM05D006285 ORTHO05D007249 3.1e-09 66.2 88 45.5
ClCG06G001800 Citrullus lanatus HOM05D006285 ORTHO05D007249 3.1e-09 66.2 80 50.0
AT5G13220 Arabidopsis thaliana HOM05D006285 ORTHO05D007249 4.0e-09 65.9 117 42.7
Prupe.1G218500 Prunus persica HOM05D006285 ORTHO05D007249 4.0e-09 65.9 110 41.8
SEGI_20867 Sequoiadendron giganteum HOM05D006285 ORTHO05D007249 4.0e-09 65.9 82 50.0
Thecc.02G195800 Theobroma cacao HOM05D006285 ORTHO05D007249 5.2e-09 65.5 120 40.0
MD13G1127100 Malus domestica HOM05D006285 ORTHO05D007249 1.2e-08 64.3 104 41.3
CANSAT01G0254 Cannabis sativa HOM05D006285 ORTHO05D007249 1.5e-08 63.9 86 45.3
PSO732G0051 Papaver somniferum HOM05D006285 ORTHO05D007249 1.5e-08 63.9 91 47.3
CSS0034430 Camellia sinensis var. sinensis HOM05D006285 ORTHO05D007249 2.0e-08 63.5 105 39.0
MELO3C022348.2 Cucumis melo HOM05D006285 ORTHO05D007249 2.0e-08 63.5 115 43.5
Gohir.D01G019500 Gossypium hirsutum HOM05D006285 ORTHO05D007249 2.0e-08 63.5 107 43.9
Gorai.002G021800 Gossypium raimondii HOM05D006285 ORTHO05D007249 2.0e-08 63.5 107 43.9
THA.LOC104825472 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 2.0e-08 63.5 108 45.4
Aa31LG3G14440 Aethionema arabicum HOM05D006285 ORTHO05D007249 2.6e-08 63.2 88 48.9
MSTRG.467 Avicennia marina HOM05D006285 ORTHO05D007249 2.6e-08 63.2 79 48.1
MELO3C017797.2 Cucumis melo HOM05D006285 ORTHO05D007249 2.6e-08 63.2 88 46.6
Potri.001G062500 Populus trichocarpa HOM05D006285 ORTHO05D007249 2.6e-08 63.2 89 46.1
Actinidia09609 Actinidia chinensis HOM05D006285 ORTHO05D007249 3.4e-08 62.8 87 46.0
CsaV3_6G007840 Cucumis sativus L. HOM05D006285 ORTHO05D007249 3.4e-08 62.8 80 50.0
Actinidia34008 Actinidia chinensis HOM05D006285 ORTHO05D007249 4.4e-08 62.4 124 37.9
AL6G23830 Arabidopsis lyrata HOM05D006285 ORTHO05D007249 4.4e-08 62.4 89 43.8
COL.COLO4_20246 Corchorus olitorius HOM05D006285 ORTHO05D007249 4.4e-08 62.4 116 38.8
PSO675G2785 Papaver somniferum HOM05D006285 ORTHO05D007249 4.4e-08 62.4 95 45.3
TAR622G0521 Trochodendron aralioides HOM05D006285 ORTHO05D007249 4.4e-08 62.4 83 48.2
Duzib248G1203 Durio zibethinus HOM05D006285 ORTHO05D007249 5.8e-08 62.0 116 39.7
ClCG07G011740 Citrullus lanatus HOM05D006285 ORTHO05D007249 7.5e-08 61.6 85 47.1
Oeu044502.1 Olea europaea HOM05D006285 ORTHO05D007249 7.5e-08 61.6 86 41.9
PGR102G0288 Punica granatum HOM05D006285 ORTHO05D007249 7.5e-08 61.6 75 50.7
Sabra01G0044900 Salix brachista HOM05D006285 ORTHO05D007249 7.5e-08 61.6 113 40.7
HanXRQChr06g0175041 Helianthus annuus HOM05D006285 ORTHO05D007249 9.8e-08 61.2 74 48.6
Dinv19860 Davidia involucrata HOM05D006285 ORTHO05D007249 1.3e-07 60.8 83 45.8
BcaC04g19135 Brassica carinata HOM05D006285 ORTHO05D007249 1.7e-07 60.5 92 43.5
CsaV3_4G002460 Cucumis sativus L. HOM05D006285 ORTHO05D007249 1.7e-07 60.5 88 45.5
Rhsim12G0019500 Rhododendron simsii HOM05D006285 ORTHO05D007249 1.7e-07 60.5 117 36.8
MSTRG.8043 Avicennia marina HOM05D006285 ORTHO05D007249 2.2e-07 60.1 80 48.8
Carub.0006s1139 Capsella rubella HOM05D006285 ORTHO05D007249 2.2e-07 60.1 98 42.9
TAR374G0139 Trochodendron aralioides HOM05D006285 ORTHO05D007249 2.2e-07 60.1 82 45.1
PSO478G0022 Papaver somniferum HOM05D006285 ORTHO05D007249 2.9e-07 59.7 127 38.6
Rhsim12G0098900 Rhododendron simsii HOM05D006285 ORTHO05D007249 2.9e-07 59.7 80 48.8
GSVIVG01000967001 Vitis vinifera HOM05D006285 ORTHO05D007249 2.9e-07 59.7 88 44.3
Eucgr.B03545 Eucalyptus grandis HOM05D006285 ORTHO05D007249 3.7e-07 59.3 83 43.4
Thhalv10014724m.g Eutrema salsugineum HOM05D006285 ORTHO05D007249 3.7e-07 59.3 102 42.2
PGR057G0008 Punica granatum HOM05D006285 ORTHO05D007249 4.9e-07 58.9 87 44.8
PGR119G0305 Punica granatum HOM05D006285 ORTHO05D007249 4.9e-07 58.9 87 44.8
RcHm_v2.0_Chr4g0429271 Rosa chinensis HOM05D006285 ORTHO05D007249 4.9e-07 58.9 102 40.2
Sabra03G0120200 Salix brachista HOM05D006285 ORTHO05D007249 4.9e-07 58.9 100 41.0
HPP92_023090 Vanilla planifolia HOM05D006285 ORTHO05D007249 4.9e-07 58.9 76 46.1
A10p24990 Brassica napus HOM05D006285 ORTHO05D007249 6.4e-07 58.5 103 42.7
C09p63860 Brassica napus HOM05D006285 ORTHO05D007249 6.4e-07 58.5 103 42.7
BolC9t59226H Brassica oleracea HOM05D006285 ORTHO05D007249 6.4e-07 58.5 103 42.7
BraA10t44561Z Brassica rapa HOM05D006285 ORTHO05D007249 6.4e-07 58.5 103 42.7
PSO017G1512 Papaver somniferum HOM05D006285 ORTHO05D007249 6.4e-07 58.5 118 37.3
Sp6g30770 Schrenkiella parvula HOM05D006285 ORTHO05D007249 6.4e-07 58.5 94 42.6
BcaB01g05368 Brassica carinata HOM05D006285 ORTHO05D007249 8.3e-07 58.2 121 41.3
BcaNung01870 Brassica carinata HOM05D006285 ORTHO05D007249 8.3e-07 58.2 95 43.2
BcaNung01871 Brassica carinata HOM05D006285 ORTHO05D007249 8.3e-07 58.2 95 43.2
BolC2t06542H Brassica oleracea HOM05D006285 ORTHO05D007249 8.3e-07 58.2 96 42.7
FvH4_4g23000 Fragaria vesca HOM05D006285 ORTHO05D007249 8.3e-07 58.2 100 37.0
Aqoxy5G03206 Aquilegia oxysepala HOM05D006285 ORTHO05D007249 1.1e-06 57.8 101 40.6
EL10Ac6g13588 Beta vulgaris HOM05D006285 ORTHO05D007249 1.1e-06 57.8 84 39.3
arahy.Tifrunner.gnm1.ann1.76C240 Arachis hypogaea HOM05D001047 ORTHO05D000768 1.4e-06 57.4 80 45.0
C02p05990 Brassica napus HOM05D006285 ORTHO05D007249 1.4e-06 57.4 96 42.7
FAN07G2449 Fragaria x ananassa HOM05D006285 ORTHO05D007249 1.4e-06 57.4 108 34.3
Peaxi162Scf00128g00175 Petunia axillaris HOM05D006285 ORTHO05D007249 1.4e-06 57.4 76 42.1
Actinidia30601 Actinidia chinensis HOM05D006285 ORTHO05D007249 1.9e-06 57.0 115 38.3
Duzib052G0121 Durio zibethinus HOM05D006285 ORTHO05D007249 1.9e-06 57.0 117 36.8
Lsat_1_v5_gn_3_31461 Lactuca sativa HOM05D006285 ORTHO05D007249 1.9e-06 57.0 82 47.6
THA.LOC104803190 Tarenaya hassleriana HOM05D006285 ORTHO05D007249 1.9e-06 57.0 92 42.4
A02p01780 Brassica napus HOM05D006285 ORTHO05D007249 2.4e-06 56.6 95 43.2
BraA02t05154Z Brassica rapa HOM05D006285 ORTHO05D007249 2.4e-06 56.6 95 43.2
HanXRQChr17g0540471 Helianthus annuus HOM05D006285 ORTHO05D007249 2.4e-06 56.6 81 43.2
Eucgr.G01954 Eucalyptus grandis HOM05D006285 ORTHO05D007249 3.2e-06 56.2 113 38.9
C03p06880 Brassica napus HOM05D006285 ORTHO05D007249 4.1e-06 55.8 105 42.9
BolC3t13190H Brassica oleracea HOM05D006285 ORTHO05D007249 4.1e-06 55.8 105 42.9
FAN17G1869 Fragaria x ananassa HOM05D006285 ORTHO05D007249 4.1e-06 55.8 108 34.3
PGSC0003DMG400006480 Solanum tuberosum HOM05D006285 ORTHO05D007249 4.1e-06 55.8 75 46.7
CAN.G1179.3 Capsicum annuum HOM05D006285 ORTHO05D000105 5.4e-06 55.5 76 46.1
CDE05G1786 Ceratophyllum demersum HOM05D001047 ORTHO05D000768 5.4e-06 55.5 103 37.9
FAN12G2625 Fragaria x ananassa HOM05D006285 ORTHO05D007249 7.0e-06 55.1 98 36.7
HanXRQChr08g0210081 Helianthus annuus HOM05D006285 ORTHO05D007249 7.0e-06 55.1 94 41.5
SEGI_41449 Sequoiadendron giganteum HOM05D001047 ORTHO05D000768 7.0e-06 55.1 99 37.4
A03p05870 Brassica napus HOM05D006285 ORTHO05D007249 9.2e-06 54.7 105 41.0
BraA03t09926Z Brassica rapa HOM05D006285 ORTHO05D007249 9.2e-06 54.7 105 41.0
ECA233G3183 Erigeron canadensis HOM05D006285 ORTHO05D007249 9.2e-06 54.7 99 40.4
ECA246G0706 Erigeron canadensis HOM05D006285 ORTHO05D007249 9.2e-06 54.7 101 39.6
Solyc12g009220.2 Solanum lycopersicum HOM05D001047 ORTHO05D000768 9.2e-06 54.7 102 39.2
Sopen12g004170 Solanum pennellii HOM05D001047 ORTHO05D000768 9.2e-06 54.7 102 39.2


User provided reference genes

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