Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01506 Aquilegia oxysepala HOM05D003758 ORTHO05D004344 4.4e-71 271.2 134 100.0
Aqoxy6G02867 Aquilegia oxysepala HOM05D003758 ORTHO05D004344 2.6e-23 112.5 79 72.2
MBI19_g03239_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 1.4e-16 90.1 79 63.3
PSO384G2631 Papaver somniferum HOM05D003758 ORTHO05D004344 3.1e-16 89.0 81 60.5
TAR633G1738 Trochodendron aralioides HOM05D003758 ORTHO05D004344 4.0e-16 88.6 134 44.8
Aa31LG1G28620 Aethionema arabicum HOM05D003758 ORTHO05D004344 5.2e-16 88.2 104 53.8
PSO339G3435 Papaver somniferum HOM05D003758 ORTHO05D004344 6.8e-16 87.8 81 59.3
Nn6g32438 Nelumbo nucifera HOM05D003758 ORTHO05D004344 1.2e-15 87.0 81 58.0
MD17G1277400 Malus domestica HOM05D003758 ORTHO05D004344 1.5e-15 86.7 83 57.8
AUR62024624 Chenopodium quinoa HOM05D003758 ORTHO05D004344 2.0e-15 86.3 135 43.7
Dinv37509 Davidia involucrata HOM05D003758 ORTHO05D004344 2.0e-15 86.3 80 61.2
AUR62011780 Chenopodium quinoa HOM05D003758 ORTHO05D004344 2.6e-15 85.9 135 43.7
MBI16_g26326_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 2.6e-15 85.9 80 62.5
vmacro23005 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 2.6e-15 85.9 80 61.2
Atru.chr5.975 Acer truncatum HOM05D003758 ORTHO05D004344 3.4e-15 85.5 81 59.3
vmacro07358 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 3.4e-15 85.5 80 61.2
Potri.002G194100 Populus trichocarpa HOM05D003758 ORTHO05D004344 4.4e-15 85.1 79 60.8
TAR629G2570 Trochodendron aralioides HOM05D003758 ORTHO05D004344 4.4e-15 85.1 81 58.0
Oeu049922.1 Olea europaea HOM05D003758 ORTHO05D004344 7.6e-15 84.3 83 56.6
vmacro02393 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 7.6e-15 84.3 80 60.0
QL03p022487 Quercus lobata HOM05D003758 ORTHO05D004344 1.3e-14 83.6 77 59.7
Ciclev10023744m.g Citrus clementina HOM05D003758 ORTHO05D004344 1.7e-14 83.2 80 58.8
Rhsim13G0004000 Rhododendron simsii HOM05D003758 ORTHO05D004344 1.7e-14 83.2 64 70.3
CSS0000786 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 2.2e-14 82.8 80 57.5
CSS0004415 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 2.2e-14 82.8 80 57.5
Dinv10116 Davidia involucrata HOM05D003758 ORTHO05D004344 2.2e-14 82.8 80 60.0
MBI18_g24870_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 2.2e-14 82.8 79 59.5
Ah.02g112390 Amaranthus hybridus HOM05D003758 ORTHO05D004344 2.9e-14 82.4 78 59.0
Migut.N00382 Erythranthe guttata HOM05D003758 ORTHO05D004344 2.9e-14 82.4 78 60.3
TWI36G1552 Tripterygium wilfordii HOM05D003758 ORTHO05D004344 2.9e-14 82.4 83 53.0
Cpa.g.sc18.67 Carica papaya HOM05D003758 ORTHO05D004344 3.7e-14 82.0 78 59.0
Gorai.007G121400 Gossypium raimondii HOM05D003758 ORTHO05D004344 3.7e-14 82.0 77 58.4
Manes.05G014105 Manihot esculenta HOM05D003758 ORTHO05D004344 3.7e-14 82.0 80 52.5
GSVIVG01020570001 Vitis vinifera HOM05D003758 ORTHO05D004344 3.7e-14 82.0 80 58.8
Atru.chr9.1365 Acer truncatum HOM05D003758 ORTHO05D004344 4.9e-14 81.6 83 55.4
MD17G1275500 Malus domestica HOM05D003758 ORTHO05D004344 6.4e-14 81.3 62 67.7
Sc05g0000350 Simmondsia chinensis HOM05D003758 ORTHO05D004344 6.4e-14 81.3 80 57.5
BcaC02g09356 Brassica carinata HOM05D003758 ORTHO05D004344 8.4e-14 80.9 79 58.2
Gohir.A11G108400 Gossypium hirsutum HOM05D003758 ORTHO05D004344 8.4e-14 80.9 77 57.1
HanXRQChr01g0018011 Helianthus annuus HOM05D003758 ORTHO05D004344 8.4e-14 80.9 82 56.1
Manes.05G007428 Manihot esculenta HOM05D003758 ORTHO05D004344 8.4e-14 80.9 90 47.8
Manes.05G010463 Manihot esculenta HOM05D003758 ORTHO05D004344 8.4e-14 80.9 90 47.8
Manes.05G012284 Manihot esculenta HOM05D003758 ORTHO05D004344 8.4e-14 80.9 90 47.8
Manes.05G014400 Manihot esculenta HOM05D003758 ORTHO05D004344 8.4e-14 80.9 90 47.8
FvH4_1g27070 Fragaria vesca HOM05D003758 ORTHO05D004344 1.9e-13 79.7 80 56.2
FAN19G1056 Fragaria x ananassa HOM05D003758 ORTHO05D004344 1.9e-13 79.7 80 56.2
FAN28G1741 Fragaria x ananassa HOM05D003758 ORTHO05D004344 1.9e-13 79.7 80 56.2
RcHm_v2.0_Chr3g0487391 Rosa chinensis HOM05D003758 ORTHO05D004344 1.9e-13 79.7 80 56.2
RcHm_v2.0_Chr3g0487761 Rosa chinensis HOM05D003758 ORTHO05D004344 1.9e-13 79.7 80 56.2
C04p41700 Brassica napus HOM05D003758 ORTHO05D004344 2.4e-13 79.3 75 60.0
BolC4t25747H Brassica oleracea HOM05D003758 ORTHO05D004344 2.4e-13 79.3 75 60.0
MBI19_g28115_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 2.4e-13 79.3 76 60.5
MSTRG.19341 Avicennia marina HOM05D003758 ORTHO05D004344 3.2e-13 79.0 83 53.0
DCAR_018285 Daucus carota HOM05D003758 ORTHO05D004344 4.1e-13 78.6 82 53.7
Actinidia03664 Actinidia chinensis HOM05D003758 ORTHO05D004344 5.4e-13 78.2 81 53.1
CiPaw.13G125700 Carya illinoinensis HOM05D003758 ORTHO05D004344 5.4e-13 78.2 78 57.7
MELO3C016319.2 Cucumis melo HOM05D003758 ORTHO05D004344 5.4e-13 78.2 78 52.6
Eucgr.F03545 Eucalyptus grandis HOM05D003758 ORTHO05D004344 5.4e-13 78.2 80 55.0
Sp7g11950 Schrenkiella parvula HOM05D003758 ORTHO05D004344 5.4e-13 78.2 80 56.2
Haze_15238 Corylus avellana HOM05D003758 ORTHO05D004344 7.1e-13 77.8 79 57.0
Solyc11g007800.3 Solanum lycopersicum HOM05D003758 ORTHO05D004344 7.1e-13 77.8 80 56.2
Sopen11g003660 Solanum pennellii HOM05D003758 ORTHO05D004344 7.1e-13 77.8 80 56.2
Cfa004172 Carpinus fangiana HOM05D003758 ORTHO05D004344 9.2e-13 77.4 79 57.0
FAN23G2430 Fragaria x ananassa HOM05D003758 ORTHO05D004344 9.2e-13 77.4 80 55.0
BcaB02g08631 Brassica carinata HOM05D003758 ORTHO05D004344 1.2e-12 77.0 75 58.7
Thhalv10024413m.g Eutrema salsugineum HOM05D003758 ORTHO05D004344 1.2e-12 77.0 86 55.8
Sed0008176 Sechium edule HOM05D003758 ORTHO05D004344 1.2e-12 77.0 79 50.6
Thecc.01G315600 Theobroma cacao HOM05D003758 ORTHO05D004344 1.2e-12 77.0 77 59.7
Duzib211G0665 Durio zibethinus HOM05D003758 ORTHO05D004344 1.6e-12 76.6 77 57.1
PGR044G1293 Punica granatum HOM05D003758 ORTHO05D004344 1.6e-12 76.6 68 63.2
PGR132G0005 Punica granatum HOM05D003758 ORTHO05D004344 1.6e-12 76.6 68 63.2
PGSC0003DMG400027361 Solanum tuberosum HOM05D003758 ORTHO05D004344 1.6e-12 76.6 80 55.0
CsaV3_4G006310 Cucumis sativus L. HOM05D003758 ORTHO05D004344 2.1e-12 76.3 77 50.6
CDE11G1215 Ceratophyllum demersum HOM05D003758 ORTHO05D004344 2.7e-12 75.9 77 57.1
Nitab4.5_0000321g0240 Nicotiana tabacum HOM05D003758 ORTHO05D004344 2.7e-12 75.9 80 53.8
Nitab4.5_0004743g0050 Nicotiana tabacum HOM05D003758 ORTHO05D004344 2.7e-12 75.9 80 53.8
Peaxi162Scf00192g01619 Petunia axillaris HOM05D003758 ORTHO05D004344 3.5e-12 75.5 80 53.8
A04p08020 Brassica napus HOM05D003758 ORTHO05D004344 4.6e-12 75.1 63 65.1
BraA04t16490Z Brassica rapa HOM05D003758 ORTHO05D004344 4.6e-12 75.1 63 65.1
CARHR142690 Cardamine hirsuta HOM05D003758 ORTHO05D004344 4.6e-12 75.1 89 51.7
Cc02_g30290 Coffea canephora HOM05D003758 ORTHO05D004344 4.6e-12 75.1 80 56.2
TPR.G18538 Trifolium pratense HOM05D003758 ORTHO05D004344 6.0e-12 74.7 80 53.8
AT2G47300 Arabidopsis thaliana HOM05D003758 ORTHO05D004344 7.8e-12 74.3 80 53.8
Lsat_1_v5_gn_1_61501 Lactuca sativa HOM05D003758 ORTHO05D004344 7.8e-12 74.3 82 50.0
Lj2A672T51 Lonicera japonica HOM05D003758 ORTHO05D004344 7.8e-12 74.3 80 53.8
Manes.17G075900 Manihot esculenta HOM05D003758 ORTHO05D004344 7.8e-12 74.3 68 55.9
SGA_v2.0_scaffold114G31985 Striga asiatica HOM05D003758 ORTHO05D004344 7.8e-12 74.3 130 38.5
Carub.0004s3002 Capsella rubella HOM05D003758 ORTHO05D004344 2.3e-11 72.8 85 54.1
CAN.G135.34 Capsicum annuum HOM05D003758 ORTHO05D004344 2.3e-11 72.8 80 53.8
Lj3g0021338 Lotus japonicus HOM05D003758 ORTHO05D004344 2.3e-11 72.8 85 49.4
MBI02_g41251_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 2.3e-11 72.8 65 60.0
THA.LOC104807090 Tarenaya hassleriana HOM05D003758 ORTHO05D004344 3.0e-11 72.4 80 51.2
AL4G46860 Arabidopsis lyrata HOM05D003758 ORTHO05D004344 3.9e-11 72.0 83 51.8
Cc00_g26020 Coffea canephora HOM05D003758 ORTHO05D004344 3.9e-11 72.0 80 51.2
ECA248G1618 Erigeron canadensis HOM05D003758 ORTHO05D004344 3.9e-11 72.0 79 51.9
Lalb_Chr02g0146891 Lupinus albus HOM05D003758 ORTHO05D004344 3.9e-11 72.0 80 52.5
Psat7g259120 Pisum sativum HOM05D003758 ORTHO05D004344 3.9e-11 72.0 80 50.0
TPR.G29732 Trifolium pratense HOM05D003758 ORTHO05D004344 3.9e-11 72.0 80 51.2
COL.COLO4_23214 Corchorus olitorius HOM05D003758 ORTHO05D004344 6.6e-11 71.2 77 53.2
Medtr4g008840 Medicago truncatula HOM05D003758 ORTHO05D004344 1.1e-10 70.5 80 50.0
unitig_8.g3963 Utricularia gibba HOM05D003758 ORTHO05D004344 1.1e-10 70.5 85 49.4
Ca_26914_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 1.5e-10 70.1 80 48.8
Ca_29676_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 1.5e-10 70.1 80 48.8
Phvul.011G184700 Phaseolus vulgaris HOM05D003758 ORTHO05D004344 1.5e-10 70.1 79 50.6
CANSAT35G0058 Cannabis sativa HOM05D003758 ORTHO05D004344 1.9e-10 69.7 94 48.9
Lj4g0003540 Lotus japonicus HOM05D003758 ORTHO05D004344 2.5e-10 69.3 85 48.2
Glyma.16G071100 Glycine max HOM05D003758 ORTHO05D004344 4.3e-10 68.6 84 47.6
Nitab4.5_0004412g0060 Nicotiana tabacum HOM05D003758 ORTHO05D004344 7.3e-10 67.8 80 50.0
arahy.Tifrunner.gnm1.ann1.8X0TS3 Arachis hypogaea HOM05D003758 ORTHO05D004344 1.6e-09 66.6 76 51.3
Glyma.15G216400 Glycine max HOM05D003758 ORTHO05D004344 2.8e-09 65.9 79 46.8
arahy.Tifrunner.gnm1.ann1.C8HKPK Arachis hypogaea HOM05D003758 ORTHO05D004344 3.6e-09 65.5 78 47.4
Hund21053 Selenicereus undatus HOM05D003758 ORTHO05D004344 4.7e-09 65.1 70 51.4
arahy.Tifrunner.gnm1.ann1.CZ320C Arachis hypogaea HOM05D003758 ORTHO05D004344 8.1e-09 64.3 76 50.0
CiPaw.05G057600 Carya illinoinensis HOM05D003758 ORTHO05D004344 1.4e-08 63.5 72 51.4
HPP92_010605 Vanilla planifolia HOM05D003758 ORTHO05D004344 3.1e-08 62.4 75 49.3
Cc02_g29260 Coffea canephora HOM05D003758 ORTHO05D004344 4.0e-08 62.0 73 53.4
VMungo1127G2096 Vigna mungo HOM05D003758 ORTHO05D004344 4.0e-08 62.0 77 46.8
ATR0693G226 Amborella trichopoda HOM05D003758 ORTHO05D004344 1.2e-07 60.5 79 44.3
Eucgr.D02543 Eucalyptus grandis HOM05D003758 ORTHO05D004344 7.6e-07 57.8 102 38.2
TAR623G1284 Trochodendron aralioides HOM05D003758 ORTHO05D004344 7.6e-07 57.8 57 52.6


User provided reference genes

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