Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01505 Aquilegia oxysepala HOM05D003758 ORTHO05D004344 6.9e-22 106.3 50 100.0
Aqoxy6G02867 Aquilegia oxysepala HOM05D003758 ORTHO05D004344 6.5e-20 99.8 49 93.9
TAR633G1738 Trochodendron aralioides HOM05D003758 ORTHO05D004344 2.2e-15 84.7 49 75.5
MBI19_g03239_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 4.8e-15 83.6 49 75.5
CSS0004415 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 1.4e-14 82.0 49 75.5
Nn6g32438 Nelumbo nucifera HOM05D003758 ORTHO05D004344 1.8e-14 81.6 48 72.9
TAR629G2570 Trochodendron aralioides HOM05D003758 ORTHO05D004344 3.1e-14 80.9 49 71.4
CSS0000786 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 9.1e-14 79.3 49 73.5
PSO339G3435 Papaver somniferum HOM05D003758 ORTHO05D004344 1.3e-12 75.5 49 71.4
arahy.Tifrunner.gnm1.ann1.8X0TS3 Arachis hypogaea HOM05D003758 ORTHO05D004344 1.7e-12 75.1 49 67.3
Dinv37509 Davidia involucrata HOM05D003758 ORTHO05D004344 1.7e-12 75.1 49 69.4
PSO384G2631 Papaver somniferum HOM05D003758 ORTHO05D004344 1.7e-12 75.1 49 71.4
arahy.Tifrunner.gnm1.ann1.CZ320C Arachis hypogaea HOM05D003758 ORTHO05D004344 3.8e-12 73.9 49 65.3
Sc05g0000350 Simmondsia chinensis HOM05D003758 ORTHO05D004344 6.5e-12 73.2 49 67.3
Psat7g259120 Pisum sativum HOM05D003758 ORTHO05D004344 8.5e-12 72.8 49 65.3
Dinv10116 Davidia involucrata HOM05D003758 ORTHO05D004344 1.1e-11 72.4 49 67.3
CiPaw.13G125700 Carya illinoinensis HOM05D003758 ORTHO05D004344 2.5e-11 71.2 49 65.3
Ca_26914_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 2.5e-11 71.2 49 65.3
Ca_29676_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 2.5e-11 71.2 49 65.3
vmacro07358 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 2.5e-11 71.2 49 65.3
vmacro23005 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 2.5e-11 71.2 49 65.3
vmacro02393 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 4.2e-11 70.5 48 66.7
Cpa.g.sc18.67 Carica papaya HOM05D003758 ORTHO05D004344 7.2e-11 69.7 49 65.3
Ciclev10023744m.g Citrus clementina HOM05D003758 ORTHO05D004344 1.2e-10 68.9 49 61.2
Oeu049922.1 Olea europaea HOM05D003758 ORTHO05D004344 1.2e-10 68.9 49 65.3
Hund21053 Selenicereus undatus HOM05D003758 ORTHO05D004344 1.2e-10 68.9 49 67.3
BcaC02g09356 Brassica carinata HOM05D003758 ORTHO05D004344 2.1e-10 68.2 49 59.2
C04p41700 Brassica napus HOM05D003758 ORTHO05D004344 2.1e-10 68.2 49 59.2
BolC4t25747H Brassica oleracea HOM05D003758 ORTHO05D004344 2.1e-10 68.2 49 59.2
CiPaw.05G057200 Carya illinoinensis HOM05D003758 ORTHO05D004344 2.1e-10 68.2 49 63.3
RcHm_v2.0_Chr3g0487391 Rosa chinensis HOM05D003758 ORTHO05D004344 2.1e-10 68.2 49 65.3
TWI36G1552 Tripterygium wilfordii HOM05D003758 ORTHO05D004344 2.1e-10 68.2 49 61.2
Atru.chr5.975 Acer truncatum HOM05D003758 ORTHO05D004344 2.7e-10 67.8 47 66.0
CiPaw.05G057800 Carya illinoinensis HOM05D003758 ORTHO05D004344 2.7e-10 67.8 49 63.3
Rhsim13G0004000 Rhododendron simsii HOM05D003758 ORTHO05D004344 2.7e-10 67.8 49 61.2
A04p08020 Brassica napus HOM05D003758 ORTHO05D004344 4.7e-10 67.0 49 61.2
BraA04t16490Z Brassica rapa HOM05D003758 ORTHO05D004344 4.7e-10 67.0 49 61.2
DCAR_018285 Daucus carota HOM05D003758 ORTHO05D004344 4.7e-10 67.0 49 61.2
Prupe.3G010600 Prunus persica HOM05D003758 ORTHO05D004344 6.1e-10 66.6 49 63.3
TPR.G23107 Trifolium pratense HOM05D003758 ORTHO05D004344 6.1e-10 66.6 47 66.0
Carub.0004s3002 Capsella rubella HOM05D003758 ORTHO05D004344 7.9e-10 66.2 49 59.2
CARHR142690 Cardamine hirsuta HOM05D003758 ORTHO05D004344 1.4e-09 65.5 49 57.1
SGA_v2.0_scaffold114G31985 Striga asiatica HOM05D003758 ORTHO05D004344 1.4e-09 65.5 49 57.1
AL4G46860 Arabidopsis lyrata HOM05D003758 ORTHO05D004344 1.8e-09 65.1 49 59.2
AT2G47300 Arabidopsis thaliana HOM05D003758 ORTHO05D004344 1.8e-09 65.1 49 59.2
CiPaw.05G057600 Carya illinoinensis HOM05D003758 ORTHO05D004344 1.8e-09 65.1 46 65.2
FvH4_1g27070 Fragaria vesca HOM05D003758 ORTHO05D004344 1.8e-09 65.1 49 63.3
FAN19G1056 Fragaria x ananassa HOM05D003758 ORTHO05D004344 1.8e-09 65.1 49 63.3
Cc00_g01260 Coffea canephora HOM05D003758 ORTHO05D004344 2.3e-09 64.7 49 59.2
Cc02_g30290 Coffea canephora HOM05D003758 ORTHO05D004344 2.3e-09 64.7 49 59.2
Sp7g11950 Schrenkiella parvula HOM05D003758 ORTHO05D004344 2.3e-09 64.7 49 59.2
CANSAT35G0058 Cannabis sativa HOM05D003758 ORTHO05D004344 3.0e-09 64.3 49 59.2
Glyma.16G071100 Glycine max HOM05D003758 ORTHO05D004344 3.0e-09 64.3 49 61.2
Lj4g0003540 Lotus japonicus HOM05D003758 ORTHO05D004344 3.9e-09 63.9 49 61.2
VMungo1127G2096 Vigna mungo HOM05D003758 ORTHO05D004344 3.9e-09 63.9 49 59.2
ATR0693G226 Amborella trichopoda HOM05D003758 ORTHO05D004344 5.1e-09 63.5 49 59.2
Medtr4g008840 Medicago truncatula HOM05D003758 ORTHO05D004344 5.1e-09 63.5 49 61.2
Phvul.011G184700 Phaseolus vulgaris HOM05D003758 ORTHO05D004344 5.1e-09 63.5 49 59.2
MD17G1277400 Malus domestica HOM05D003758 ORTHO05D004344 6.7e-09 63.2 49 63.3
Thhalv10024413m.g Eutrema salsugineum HOM05D003758 ORTHO05D004344 8.8e-09 62.8 49 55.1
Nitab4.5_0004412g0060 Nicotiana tabacum HOM05D003758 ORTHO05D004344 8.8e-09 62.8 49 59.2
GSVIVG01020570001 Vitis vinifera HOM05D003758 ORTHO05D004344 1.1e-08 62.4 49 61.2
CsaV3_4G006310 Cucumis sativus L. HOM05D003758 ORTHO05D004344 1.5e-08 62.0 50 62.0
Glyma.15G216400 Glycine max HOM05D003758 ORTHO05D004344 1.5e-08 62.0 49 59.2
Nitab4.5_0000321g0240 Nicotiana tabacum HOM05D003758 ORTHO05D004344 1.5e-08 62.0 49 57.1
PGR044G1293 Punica granatum HOM05D003758 ORTHO05D004344 1.5e-08 62.0 49 55.1
PGR132G0005 Punica granatum HOM05D003758 ORTHO05D004344 1.5e-08 62.0 49 55.1
Thecc.01G315600 Theobroma cacao HOM05D003758 ORTHO05D004344 1.5e-08 62.0 49 57.1
Nitab4.5_0004743g0050 Nicotiana tabacum HOM05D003758 ORTHO05D004344 2.0e-08 61.6 49 57.1
QL03p022487 Quercus lobata HOM05D003758 ORTHO05D004344 2.0e-08 61.6 49 55.1
Sed0008176 Sechium edule HOM05D003758 ORTHO05D004344 2.0e-08 61.6 50 62.0
Cfa004172 Carpinus fangiana HOM05D003758 ORTHO05D004344 2.6e-08 61.2 49 57.1
Haze_15238 Corylus avellana HOM05D003758 ORTHO05D004344 2.6e-08 61.2 49 57.1
Haze_16412 Corylus avellana HOM05D003758 ORTHO05D004344 2.6e-08 61.2 48 58.3
Eucgr.F03545 Eucalyptus grandis HOM05D003758 ORTHO05D004344 2.6e-08 61.2 46 60.9
Lj3g0021338 Lotus japonicus HOM05D003758 ORTHO05D004344 2.6e-08 61.2 49 59.2
Peaxi162Scf00192g01619 Petunia axillaris HOM05D003758 ORTHO05D004344 2.6e-08 61.2 49 57.1
Psat4g209760 Pisum sativum HOM05D003758 ORTHO05D004344 2.6e-08 61.2 49 59.2
BcaB02g08631 Brassica carinata HOM05D003758 ORTHO05D004344 3.3e-08 60.8 49 55.1
Migut.N00382 Erythranthe guttata HOM05D003758 ORTHO05D004344 4.4e-08 60.5 49 57.1
GSVIVG01038383001 Vitis vinifera HOM05D003758 ORTHO05D004344 4.4e-08 60.5 49 65.3
FAN28G1741 Fragaria x ananassa HOM05D003758 ORTHO05D004344 5.7e-08 60.1 49 59.2
Sed0003653 Sechium edule HOM05D003758 ORTHO05D004344 5.7e-08 60.1 49 59.2
THA.LOC104807090 Tarenaya hassleriana HOM05D003758 ORTHO05D004344 5.7e-08 60.1 49 55.1
FAN23G2430 Fragaria x ananassa HOM05D003758 ORTHO05D004344 7.4e-08 59.7 49 59.2
Lalb_Chr02g0146891 Lupinus albus HOM05D003758 ORTHO05D004344 7.4e-08 59.7 49 57.1
Potri.002G194100 Populus trichocarpa HOM05D003758 ORTHO05D004344 7.4e-08 59.7 49 57.1
Duzib211G0665 Durio zibethinus HOM05D003758 ORTHO05D004344 9.7e-08 59.3 49 53.1
SalBow3G2832 Salvia bowleyana HOM05D003758 ORTHO05D004344 9.7e-08 59.3 49 57.1
PGSC0003DMG400027361 Solanum tuberosum HOM05D003758 ORTHO05D004344 9.7e-08 59.3 49 57.1
Atru.chr9.1365 Acer truncatum HOM05D003758 ORTHO05D004344 1.3e-07 58.9 43 62.8
Os11g0677500 Oryza sativa ssp. japonica HOM05D003758 ORTHO05D004344 1.7e-07 58.5 45 55.6
CAN.G135.34 Capsicum annuum HOM05D003758 ORTHO05D004344 2.2e-07 58.2 49 57.1
Aa31LG1G28620 Aethionema arabicum HOM05D003758 ORTHO05D004344 2.8e-07 57.8 49 53.1
ECA248G1618 Erigeron canadensis HOM05D003758 ORTHO05D004344 3.7e-07 57.4 49 44.9
Sopen11g003660 Solanum pennellii HOM05D003758 ORTHO05D004344 4.8e-07 57.0 49 55.1
arahy.Tifrunner.gnm1.ann1.C8HKPK Arachis hypogaea HOM05D003758 ORTHO05D004344 6.3e-07 56.6 41 58.5
MD17G1275600 Malus domestica HOM05D003758 ORTHO05D004344 6.3e-07 56.6 49 55.1
Solyc11g007800.3 Solanum lycopersicum HOM05D003758 ORTHO05D004344 6.3e-07 56.6 49 53.1
COL.COLO4_23214 Corchorus olitorius HOM05D003758 ORTHO05D004344 8.2e-07 56.2 47 53.2
Manes.17G075900 Manihot esculenta HOM05D003758 ORTHO05D004344 8.2e-07 56.2 49 55.1
HPP92_010605 Vanilla planifolia HOM05D003758 ORTHO05D004344 1.1e-06 55.8 47 53.2
Manes.05G010463 Manihot esculenta HOM05D003758 ORTHO05D004344 1.4e-06 55.5 49 55.1
Manes.05G012284 Manihot esculenta HOM05D003758 ORTHO05D004344 1.4e-06 55.5 49 55.1
Manes.05G014105 Manihot esculenta HOM05D003758 ORTHO05D004344 1.4e-06 55.5 49 55.1
Manes.05G014400 Manihot esculenta HOM05D003758 ORTHO05D004344 1.4e-06 55.5 49 55.1
Manes.08G002202 Manihot esculenta HOM05D003758 ORTHO05D004344 1.4e-06 55.5 49 55.1
unitig_8.g3963 Utricularia gibba HOM05D003758 ORTHO05D004344 1.8e-06 55.1 49 51.0
Manes.05G007428 Manihot esculenta HOM05D003758 ORTHO05D004344 2.4e-06 54.7 48 56.2
Eucgr.D02543 Eucalyptus grandis HOM05D003758 ORTHO05D004344 3.1e-06 54.3 46 54.3
Lsat_1_v5_gn_1_61501 Lactuca sativa HOM05D003758 ORTHO05D004344 3.1e-06 54.3 49 44.9
AUR62011780 Chenopodium quinoa HOM05D003758 ORTHO05D004344 9.1e-06 52.8 49 53.1
Gohir.A11G108400 Gossypium hirsutum HOM05D003758 ORTHO05D004344 9.1e-06 52.8 49 46.9
Gohir.D11G112900 Gossypium hirsutum HOM05D003758 ORTHO05D004344 9.1e-06 52.8 49 46.9


User provided reference genes

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