Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 1.7e-284 982.6 761 100.0
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 5.2e-153 545.8 776 68.4
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 7.5e-144 515.4 771 68.5
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 1.2e-138 498.0 760 58.6
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 2.8e-138 496.9 674 74.0
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 1.1e-137 495.0 761 57.6
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 1.5e-136 491.1 758 68.1
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 3.4e-136 490.0 764 67.1
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 8.6e-132 475.3 766 67.4
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.2e-128 464.9 765 67.2
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 2.6e-128 463.8 769 65.7
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 2.6e-128 463.8 769 65.7
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 4.4e-128 463.0 761 54.1
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 3.8e-127 459.9 772 66.3
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 7.1e-126 455.7 724 64.8
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 1.2e-125 454.9 724 64.6
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 2.1e-125 454.1 768 65.1
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 2.1e-125 454.1 535 48.8
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 4.3e-123 446.4 772 63.0
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 3.6e-122 443.4 533 57.8
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 3.1e-121 440.3 767 64.0
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 3.4e-120 436.8 766 65.7
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 7.6e-120 435.6 527 59.0
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.9e-119 433.7 765 62.1
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 3.8e-119 433.3 527 58.8
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 6.4e-119 432.6 766 65.5
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 2.4e-118 430.6 773 60.9
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 2.1e-117 427.6 765 65.5
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 6.0e-117 426.0 758 55.3
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 6.0e-117 426.0 769 57.3
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 1.5e-115 421.4 671 69.4
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 5.6e-115 419.5 677 65.7
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.3e-114 418.3 773 63.1
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.8e-114 417.2 770 62.7
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 6.2e-114 416.0 782 60.0
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 8.1e-114 415.6 525 51.8
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 8.1e-114 415.6 453 62.5
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.1e-114 415.6 772 41.8
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 8.1e-114 415.6 772 41.8
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 1.1e-113 415.2 521 57.0
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 3.1e-113 413.7 523 59.1
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 4.0e-113 413.3 453 62.9
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 4.0e-113 413.3 664 67.0
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 6.9e-113 412.5 418 62.7
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 2.6e-112 410.6 454 50.0
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 2.6e-112 410.6 737 64.2
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 9.9e-112 408.7 687 64.5
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 8.4e-111 405.6 525 54.1
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 1.1e-110 405.2 524 54.2
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 1.4e-110 404.8 522 54.8
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.4e-110 404.8 785 53.0
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 1.4e-110 404.8 456 59.9
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.4e-110 404.1 362 68.5
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.3e-108 398.3 500 55.6
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 3.0e-108 397.1 672 66.1
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 3.9e-108 396.7 676 65.2
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 5.6e-107 392.9 700 62.4
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 1.6e-106 391.3 763 61.1
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 2.8e-106 390.6 520 54.0
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 8.1e-106 389.0 416 62.3
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 1.4e-105 388.3 521 54.1
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 1.4e-105 388.3 521 54.7
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 2.4e-105 387.5 808 57.1
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 2.4e-105 387.5 519 54.3
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 5.3e-105 386.3 521 49.3
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 5.3e-105 386.3 448 58.3
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 6.9e-105 386.0 655 67.8
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 2.6e-104 384.0 528 52.8
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 5.8e-104 382.9 523 55.1
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 7.6e-104 382.5 524 53.1
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 2.2e-103 380.9 529 50.7
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 2.2e-103 380.9 527 54.1
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 2.2e-103 380.9 765 52.4
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 4.9e-103 379.8 410 65.6
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 7.1e-102 375.9 523 53.3
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 2.1e-101 374.4 441 59.4
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 4.6e-101 373.2 764 52.6
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 1.8e-100 371.3 686 65.0
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 1.8e-100 371.3 557 76.7
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.3e-100 370.9 428 56.5
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 6.7e-100 369.4 518 46.5
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 1.6e-98 364.8 550 49.1
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.1e-97 362.1 553 72.7
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 5.3e-97 359.8 571 49.7
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 6.9e-97 359.4 540 76.7
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 6.9e-97 359.4 415 61.0
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 9.0e-97 359.0 448 59.6
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 9.0e-97 359.0 448 59.6
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 9.0e-97 359.0 324 71.3
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 2.6e-96 357.5 368 66.8
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 4.5e-96 356.7 431 58.0
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 1.3e-95 355.1 368 66.6
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 6.5e-95 352.8 449 59.2
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 8.4e-95 352.4 414 57.7
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 1.2e-93 348.6 429 56.9
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 3.5e-93 347.1 419 58.7
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 6.1e-93 346.3 586 63.7
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 8.7e-92 342.4 344 64.5
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 2.0e-88 331.3 341 63.3
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 2.9e-87 327.4 314 67.5
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 5.3e-81 306.6 358 58.1
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 1.0e-68 265.8 373 54.4
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 2.0e-64 251.5 180 65.0
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 1.6e-56 225.3 357 39.2
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 8.5e-55 219.5 530 32.6
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 9.2e-49 199.5 180 57.8
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.4e-36 159.1 383 44.6
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 5.2e-36 157.1 479 36.1
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 8.1e-29 133.3 345 47.2
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 8.1e-21 106.7 75 65.3
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 4.0e-20 104.4 215 57.7
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 6.4e-18 97.1 132 38.6
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 3.2e-17 94.7 126 41.3
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 8.1e-13 80.1 45 77.8
vmacro05905 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 6.0e-08 63.9 43 67.4
AUR62026047 Chenopodium quinoa HOM05D006106 ORTHO05D007662 5.6e-06 57.4 128 32.0
Sc01g0003660 Simmondsia chinensis HOM05D007104 ORTHO05D008851 9.6e-06 56.6 91 33.0


User provided reference genes

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