Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01157 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 3.7e-120 434.9 220 100.0
Aqoxy3G01156 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 2.2e-67 259.6 213 64.8
TAR371G0870 Trochodendron aralioides HOM05D000225 ORTHO05D002520 1.3e-64 250.4 214 61.7
Manes.06G108500 Manihot esculenta HOM05D000225 ORTHO05D002520 2.0e-57 226.5 219 53.0
Atru.chr9.2548 Acer truncatum HOM05D000225 ORTHO05D002520 7.7e-57 224.6 208 54.8
Cc11_g15550 Coffea canephora HOM05D000225 ORTHO05D002520 3.6e-54 215.7 185 58.4
Potri.015G081601 Populus trichocarpa HOM05D000225 ORTHO05D002520 5.7e-52 208.4 208 51.4
Potri.T125208 Populus trichocarpa HOM05D000225 ORTHO05D002520 5.7e-52 208.4 208 51.4
MBI10_g00732_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D002520 1.7e-51 206.8 180 54.4
Dinv24806 Davidia involucrata HOM05D000225 ORTHO05D002520 2.4e-50 203.0 195 53.8
Manes.12G024400 Manihot esculenta HOM05D000225 ORTHO05D002520 4.1e-50 202.2 195 51.3
Prupe.5G168000 Prunus persica HOM05D000225 ORTHO05D002520 4.1e-50 202.2 219 51.6
FAN12G1195 Fragaria x ananassa HOM05D000740 ORTHO05D002520 5.3e-50 201.8 210 48.1
Thecc.03G022500 Theobroma cacao HOM05D000225 ORTHO05D002520 5.3e-50 201.8 187 52.4
FAN07G0546 Fragaria x ananassa HOM05D000740 ORTHO05D002520 9.1e-50 201.1 210 48.6
FAN07G1090 Fragaria x ananassa HOM05D000740 ORTHO05D002520 9.1e-50 201.1 210 48.6
Ciclev10033617m.g Citrus clementina HOM05D000225 ORTHO05D002520 1.6e-49 200.3 202 51.0
FAN12G1520 Fragaria x ananassa HOM05D000740 ORTHO05D002520 1.6e-49 200.3 210 48.1
FvH4_4g25871 Fragaria vesca HOM05D000225 ORTHO05D002520 2.6e-49 199.5 210 48.1
TWI39G0501 Tripterygium wilfordii HOM05D000225 ORTHO05D002520 4.5e-49 198.7 205 49.3
Hma1.2p1_0223F.1_g094140 Hydrangea macrophylla HOM05D000225 ORTHO05D002520 1.3e-48 197.2 213 51.2
Haze_12234 Corylus avellana HOM05D000225 ORTHO05D002520 8.5e-48 194.5 210 50.0
MD06G1169200 Malus domestica HOM05D000225 ORTHO05D002520 1.5e-47 193.7 213 50.7
MBI16_g23850_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D002520 1.9e-47 193.4 209 49.8
MD16G1098600 Malus domestica HOM05D000225 ORTHO05D002520 1.9e-47 193.4 215 46.5
Cpa.g.sc33.2 Carica papaya HOM05D000225 ORTHO05D002520 3.2e-47 192.6 204 49.0
Prupe.1G247900 Prunus persica HOM05D000225 ORTHO05D002520 4.2e-47 192.2 220 47.3
FAN17G1047 Fragaria x ananassa HOM05D000740 ORTHO05D002520 7.2e-47 191.4 209 46.4
FAN22G2293 Fragaria x ananassa HOM05D000225 ORTHO05D002520 2.1e-46 189.9 209 45.5
CAN.G587.20 Capsicum annuum HOM05D000225 ORTHO05D002520 4.7e-46 188.7 218 45.4
RcHm_v2.0_Chr4g0433311 Rosa chinensis HOM05D000225 ORTHO05D002520 1.0e-45 187.6 205 46.8
CANSAT01G1082 Cannabis sativa HOM05D000225 ORTHO05D002520 3.0e-45 186.0 200 48.0
Eucgr.H02518 Eucalyptus grandis HOM05D000225 ORTHO05D002520 4.0e-45 185.7 207 46.4
Peaxi162Scf00013g00053 Petunia axillaris HOM05D000225 ORTHO05D002520 4.0e-45 185.7 175 53.1
COL.COLO4_30151 Corchorus olitorius HOM05D000225 ORTHO05D002520 8.8e-45 184.5 183 49.7
Glyma.01G027100 Glycine max HOM05D000225 ORTHO05D002520 1.2e-44 184.1 215 47.0
Atru.chr11.2135 Acer truncatum HOM05D000225 ORTHO05D002520 2.0e-44 183.3 186 48.4
Glyma.08G283300 Glycine max HOM05D000225 ORTHO05D002520 2.0e-44 183.3 208 47.1
Manes.13G026000 Manihot esculenta HOM05D000225 ORTHO05D002520 2.0e-44 183.3 199 48.2
Actinidia37418 Actinidia chinensis HOM05D000225 ORTHO05D002520 3.3e-44 182.6 223 47.1
Atru.chr11.2119 Acer truncatum HOM05D000225 ORTHO05D002520 4.4e-44 182.2 186 48.4
Eucgr.B00237 Eucalyptus grandis HOM05D000225 ORTHO05D002520 1.3e-43 180.6 179 50.8
Gorai.005G179900 Gossypium raimondii HOM05D000225 ORTHO05D002520 1.3e-43 180.6 207 46.4
FvH4_5g05950 Fragaria vesca HOM05D000225 ORTHO05D002520 1.7e-43 180.3 217 47.5
DCAR_005851 Daucus carota HOM05D000225 ORTHO05D002520 2.8e-43 179.5 182 50.0
Gohir.D02G159800 Gossypium hirsutum HOM05D000225 ORTHO05D002520 3.7e-43 179.1 207 46.4
Lalb_Chr16g0382021 Lupinus albus HOM05D000225 ORTHO05D002520 3.7e-43 179.1 205 44.9
Oeu059915.1 Olea europaea HOM05D000225 ORTHO05D002520 3.7e-43 179.1 210 50.0
Sopen06g026910 Solanum pennellii HOM05D000225 ORTHO05D002520 3.7e-43 179.1 201 48.8
FAN18G4107 Fragaria x ananassa HOM05D000225 ORTHO05D002520 4.8e-43 178.7 209 48.3
Lj6A811T76 Lonicera japonica HOM05D000225 ORTHO05D002520 6.3e-43 178.3 180 52.2
FAN08G1117 Fragaria x ananassa HOM05D000225 ORTHO05D002520 8.2e-43 177.9 217 47.0
Gohir.A03G136600 Gossypium hirsutum HOM05D000225 ORTHO05D002520 1.1e-42 177.6 207 46.4
Solyc06g069610.1 Solanum lycopersicum HOM05D000225 ORTHO05D002520 1.1e-42 177.6 209 47.8
Phvul.002G059500 Phaseolus vulgaris HOM05D000225 ORTHO05D002520 1.8e-42 176.8 200 45.5
Lj2g0016247 Lotus japonicus HOM05D000225 ORTHO05D002520 5.3e-42 175.3 213 46.0
PGSC0003DMG400037297 Solanum tuberosum HOM05D000225 ORTHO05D002520 7.0e-42 174.9 208 50.0
GSVIVG01004091001 Vitis vinifera HOM05D000225 ORTHO05D002520 7.0e-42 174.9 188 48.9
Lj4g0021993 Lotus japonicus HOM05D000225 ORTHO05D002520 9.1e-42 174.5 206 45.6
FAN13G0456 Fragaria x ananassa HOM05D000225 ORTHO05D002520 7.7e-41 171.4 217 46.5
VMungo1215G0379 Vigna mungo HOM05D000225 ORTHO05D002520 7.7e-41 171.4 209 43.1
Thecc.02G257100 Theobroma cacao HOM05D000225 ORTHO05D002520 1.3e-40 170.6 199 47.7
Psat2g094040 Pisum sativum HOM05D000225 ORTHO05D002520 2.9e-40 169.5 208 41.3
Duzib251G0491 Durio zibethinus HOM05D000225 ORTHO05D002520 3.8e-40 169.1 197 48.2
TPR.G38785 Trifolium pratense HOM05D000225 ORTHO05D002520 6.5e-40 168.3 205 42.9
Lj9A444G106 Lonicera japonica HOM05D000225 ORTHO05D002520 8.5e-40 167.9 154 53.2
ECA246G1268 Erigeron canadensis HOM05D000225 ORTHO05D009144 1.1e-39 167.5 209 44.5
Medtr5g033490 Medicago truncatula HOM05D000225 ORTHO05D002520 2.5e-39 166.4 201 41.8
Rhsim12G0112300 Rhododendron simsii HOM05D000225 ORTHO05D002520 2.5e-39 166.4 201 46.3
CAN.G298.29 Capsicum annuum HOM05D000225 ORTHO05D002520 5.5e-39 165.2 196 48.5
Lsat_1_v5_gn_3_28821 Lactuca sativa HOM05D000225 ORTHO05D002520 1.2e-38 164.1 179 46.4
HanXRQChr05g0154581 Helianthus annuus HOM05D000225 ORTHO05D002520 1.6e-38 163.7 220 40.9
DCAR_026528 Daucus carota HOM05D000740 ORTHO05D003236 4.7e-38 162.2 212 42.5
PGR119G1031 Punica granatum HOM05D000225 ORTHO05D002520 8.0e-38 161.4 208 44.2
VMungo0251G0993 Vigna mungo HOM05D000225 ORTHO05D002520 8.0e-38 161.4 203 43.8
Sabra08G0141900 Salix brachista HOM05D000225 ORTHO05D002520 1.0e-37 161.0 202 45.5
arahy.Tifrunner.gnm1.ann1.P7CPN3 Arachis hypogaea HOM05D000225 ORTHO05D002520 4.0e-37 159.1 207 41.5
COL.COLO4_24245 Corchorus olitorius HOM05D006585 ORTHO05D002520 6.8e-37 158.3 176 44.9
arahy.Tifrunner.gnm1.ann1.REE5L6 Arachis hypogaea HOM05D000225 ORTHO05D002520 8.8e-37 157.9 207 41.1
Phvul.003G063700 Phaseolus vulgaris HOM05D000225 ORTHO05D002520 8.8e-37 157.9 202 43.1
FAN04G2503 Fragaria x ananassa HOM05D000225 ORTHO05D002520 1.5e-36 157.1 209 45.5
Nitab4.5_0006673g0100 Nicotiana tabacum HOM05D000225 ORTHO05D002520 1.5e-36 157.1 198 44.4
arahy.Tifrunner.gnm1.ann1.6V1TUE Arachis hypogaea HOM05D000225 ORTHO05D002520 3.4e-36 156.0 202 43.1
CSS0023507 Camellia sinensis var. sinensis HOM05D000225 ORTHO05D002520 1.3e-35 154.1 211 44.1
HanXRQChr06g0174451 Helianthus annuus HOM05D000225 ORTHO05D002520 1.3e-35 154.1 209 40.7
Eucgr.B00236 Eucalyptus grandis HOM05D000225 ORTHO05D002520 4.8e-35 152.1 179 46.9
arahy.Tifrunner.gnm1.ann1.7J5ZWH Arachis hypogaea HOM05D000225 ORTHO05D002520 2.4e-34 149.8 216 41.2
Lsat_1_v5_gn_5_15880 Lactuca sativa HOM05D000225 ORTHO05D002520 3.1e-34 149.4 214 42.5
Migut.L01480 Erythranthe guttata HOM05D000225 ORTHO05D002520 7.0e-34 148.3 205 42.0
MELO3C011965.2 Cucumis melo HOM05D000225 ORTHO05D002520 3.5e-33 146.0 192 41.1
CsaV3_5G031250 Cucumis sativus L. HOM05D000225 ORTHO05D002520 1.3e-32 144.1 168 44.6
MD13G1097500 Malus domestica HOM05D000225 ORTHO05D002520 2.5e-31 139.8 171 41.5
ATR0585G088 Amborella trichopoda HOM05D000225 ORTHO05D002520 3.2e-31 139.4 208 39.4
Sed0021349 Sechium edule HOM05D000225 ORTHO05D002520 5.5e-31 138.7 207 38.6
ClCG05G025640 Citrullus lanatus HOM05D000225 ORTHO05D002520 7.5e-28 128.3 218 37.2
Nitab4.5_0003021g0010 Nicotiana tabacum HOM05D000225 ORTHO05D002520 3.7e-27 125.9 119 52.9
TAR629G3395 Trochodendron aralioides HOM05D000225 ORTHO05D002520 1.8e-26 123.6 104 59.6
MSTRG.572 Avicennia marina HOM05D000225 ORTHO05D002520 8.6e-24 114.8 151 41.7
PSO017G6892 Papaver somniferum HOM05D000225 ORTHO05D002520 1.2e-22 110.9 108 50.0
HPP92_006406 Vanilla planifolia HOM05D000225 ORTHO05D002520 1.2e-22 110.9 207 35.3
Ca_04581_v3 Cicer arietinum L. HOM05D000225 ORTHO05D002520 1.6e-17 94.0 104 42.3
Potri.008G187500 Populus trichocarpa HOM05D000225 ORTHO05D002520 1.2e-14 84.3 65 60.0
Zm00001eb342090 Zea mays HOM05D000225 ORTHO05D002520 1.2e-14 84.3 114 36.8
Sabra15G0105500 Salix brachista HOM05D000805 ORTHO05D000624 1.4e-13 80.9 83 48.2
ECA246G2324 Erigeron canadensis HOM05D000225 ORTHO05D002520 8.3e-11 71.6 69 50.7
Haze_08781 Corylus avellana HOM05D000225 ORTHO05D002520 3.2e-10 69.7 99 42.4
Cc00_g21990 Coffea canephora HOM05D000302 ORTHO05D000334 2.7e-09 66.6 58 62.1
Aqoxy7G03979 Aquilegia oxysepala HOM05D000225 ORTHO05D002520 4.6e-09 65.9 199 27.1
Cfa012229 Carpinus fangiana HOM05D065004 ORTHO05D002520 1.7e-08 63.9 75 48.0
HanXRQChr05g0139801 Helianthus annuus HOM05D000225 ORTHO05D002520 3.0e-08 63.2 196 24.5
SEGI_19066 Sequoiadendron giganteum HOM05D000225 ORTHO05D002520 3.9e-08 62.8 179 25.7
Rhsim08G0227900 Rhododendron simsii HOM05D000225 ORTHO05D002520 5.0e-08 62.4 196 25.0
Dinv30434 Davidia involucrata HOM05D000225 ORTHO05D002520 6.6e-08 62.0 177 25.4
Nn6g35326 Nelumbo nucifera HOM05D000225 ORTHO05D002520 8.6e-08 61.6 196 25.5
ATR0322G036 Amborella trichopoda HOM05D000225 ORTHO05D002520 1.5e-07 60.8 196 30.1
Nn8g39069 Nelumbo nucifera HOM05D000225 ORTHO05D002520 5.6e-07 58.9 196 24.5
ECA232G2392 Erigeron canadensis HOM05D000225 ORTHO05D002520 9.5e-07 58.2 137 26.3
Migut.I00894 Erythranthe guttata HOM05D000225 ORTHO05D002520 1.2e-06 57.8 179 25.1
MBI04_g37499_MAGBIO Magnolia biondii HOM05D000225 ORTHO05D002520 1.2e-06 57.8 209 25.4
Actinidia32101 Actinidia chinensis HOM05D000225 ORTHO05D002520 1.6e-06 57.4 197 24.4
TAR636G1254 Trochodendron aralioides HOM05D000225 ORTHO05D002520 1.6e-06 57.4 129 26.4
ATR0705G193 Amborella trichopoda HOM05D000225 ORTHO05D002520 2.1e-06 57.0 114 28.9
Potri.001G190200 Populus trichocarpa HOM05D000225 ORTHO05D002520 2.1e-06 57.0 176 23.9
Lalb_Chr22g0351581 Lupinus albus HOM05D000225 ORTHO05D002520 2.8e-06 56.6 199 26.1
Dinv37974 Davidia involucrata HOM05D000225 ORTHO05D002520 3.6e-06 56.2 177 24.9
Duzib235G1437 Durio zibethinus HOM05D000225 ORTHO05D002520 3.6e-06 56.2 203 24.1
Lsat_1_v5_gn_4_98620 Lactuca sativa HOM05D000225 ORTHO05D002520 3.6e-06 56.2 202 25.2
Nitab4.5_0008646g0010 Nicotiana tabacum HOM05D000225 ORTHO05D002520 3.6e-06 56.2 177 25.4
Oeu017124.1 Olea europaea HOM05D000225 ORTHO05D002520 3.6e-06 56.2 199 23.6
Lsat_1_v5_gn_1_27401 Lactuca sativa HOM05D000225 ORTHO05D009781 8.1e-06 55.1 190 24.2
MD17G1183700 Malus domestica HOM05D000225 ORTHO05D002520 8.1e-06 55.1 176 23.3


User provided reference genes

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