Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00879 Aquilegia oxysepala HOM05D007129 ORTHO05D008680 1.5e-227 792.7 409 100.0
Aqoxy3G00878 Aquilegia oxysepala HOM05D007129 ORTHO05D008680 3.1e-74 283.5 220 70.5
CSS0035860 Camellia sinensis var. sinensis HOM05D007129 ORTHO05D008680 2.1e-59 234.2 203 60.6
Dinv09179 Davidia involucrata HOM05D007129 ORTHO05D008680 1.4e-58 231.5 245 55.1
CANSAT80G0701 Cannabis sativa HOM05D007129 ORTHO05D008680 1.8e-58 231.1 224 55.8
GSVIVG01007819001 Vitis vinifera HOM05D007129 ORTHO05D008680 8.9e-58 228.8 229 55.5
Nn4g22908 Nelumbo nucifera HOM05D007129 ORTHO05D008680 2.0e-57 227.6 234 54.7
Actinidia34958 Actinidia chinensis HOM05D002131 ORTHO05D008680 4.4e-57 226.5 184 62.5
TAR629G0718 Trochodendron aralioides HOM05D007129 ORTHO05D008680 4.4e-57 226.5 240 54.2
Nitab4.5_0001642g0040 Nicotiana tabacum HOM05D007129 ORTHO05D008680 5.8e-57 226.1 220 57.3
Atru.chr9.2406 Acer truncatum HOM05D007129 ORTHO05D008680 9.9e-57 225.3 217 55.8
CiPaw.11G031300 Carya illinoinensis HOM05D007129 ORTHO05D008680 1.7e-56 224.6 186 61.3
TWI15G0302 Tripterygium wilfordii HOM05D007129 ORTHO05D008680 1.7e-56 224.6 218 56.0
Cfa019070 Carpinus fangiana HOM05D007129 ORTHO05D008680 2.9e-56 223.8 217 57.1
Haze_07441 Corylus avellana HOM05D007129 ORTHO05D008680 2.9e-56 223.8 217 57.1
FAN13G1816 Fragaria x ananassa HOM05D007129 ORTHO05D008680 6.4e-56 222.6 218 57.3
FAN18G4566 Fragaria x ananassa HOM05D007129 ORTHO05D008680 6.4e-56 222.6 214 57.0
Ciclev10021561m.g Citrus clementina HOM05D007129 ORTHO05D008680 8.3e-56 222.2 200 58.5
FvH4_5g16440 Fragaria vesca HOM05D007129 ORTHO05D008680 8.3e-56 222.2 214 57.0
Cc00_g15150 Coffea canephora HOM05D007129 ORTHO05D008680 1.4e-55 221.5 224 55.8
Sabra15G0095300 Salix brachista HOM05D007129 ORTHO05D008680 1.4e-55 221.5 231 52.4
Nitab4.5_0001286g0070 Nicotiana tabacum HOM05D007129 ORTHO05D008680 1.9e-55 221.1 221 56.1
Rhsim12G0161900 Rhododendron simsii HOM05D007129 ORTHO05D008680 1.9e-55 221.1 196 59.7
Sabra15G0096300 Salix brachista HOM05D007129 ORTHO05D008680 1.9e-55 221.1 230 52.6
Eucgr.K02877 Eucalyptus grandis HOM05D007129 ORTHO05D008680 2.4e-55 220.7 187 61.0
EL10Ac5g10824 Beta vulgaris HOM05D007129 ORTHO05D008680 3.2e-55 220.3 218 54.6
Lsat_1_v5_gn_4_73321 Lactuca sativa HOM05D007129 ORTHO05D008680 3.2e-55 220.3 218 55.5
Potri.015G071300 Populus trichocarpa HOM05D007129 ORTHO05D008680 3.2e-55 220.3 232 53.0
SGA_v2.0_scaffold7G04113 Striga asiatica HOM05D007129 ORTHO05D008680 4.1e-55 219.9 222 55.4
RcHm_v2.0_Chr7g0179661 Rosa chinensis HOM05D007129 ORTHO05D008680 5.4e-55 219.5 216 57.4
CsaV3_1G008250 Cucumis sativus L. HOM05D007129 ORTHO05D008680 7.1e-55 219.2 189 61.9
Hma1.2p1_1643F.1_g295180 Hydrangea macrophylla HOM05D007129 ORTHO05D008680 7.1e-55 219.2 199 58.8
Hund02711 Selenicereus undatus HOM05D007129 ORTHO05D008680 7.1e-55 219.2 223 57.0
Sopen03g032940 Solanum pennellii HOM05D007129 ORTHO05D008680 9.2e-55 218.8 200 58.0
PGSC0003DMG401024472 Solanum tuberosum HOM05D007129 ORTHO05D008680 9.2e-55 218.8 200 57.5
Migut.D01914 Erythranthe guttata HOM05D007129 ORTHO05D008680 1.2e-54 218.4 227 55.1
Peaxi162Scf00017g02522 Petunia axillaris HOM05D007129 ORTHO05D008680 1.2e-54 218.4 185 60.5
Prupe.5G178800 Prunus persica HOM05D007129 ORTHO05D008680 1.2e-54 218.4 192 62.5
PGR044G2359 Punica granatum HOM05D007129 ORTHO05D008680 1.6e-54 218.0 221 53.8
Solyc03g113880.4 Solanum lycopersicum HOM05D007129 ORTHO05D008680 1.6e-54 218.0 221 55.7
vmacro16590 Vaccinium macrocarpon HOM05D007129 ORTHO05D008680 2.7e-54 217.2 219 56.2
QL10p012428 Quercus lobata HOM05D007129 ORTHO05D008680 3.5e-54 216.9 214 55.6
Thecc.03G005100 Theobroma cacao HOM05D007129 ORTHO05D008680 3.5e-54 216.9 219 57.1
Ah.11g046160 Amaranthus hybridus HOM05D000306 ORTHO05D003182 1.0e-53 215.3 214 54.7
CAN.G853.11 Capsicum annuum HOM05D007129 ORTHO05D008680 1.0e-53 215.3 212 53.8
Duzib068G0087 Durio zibethinus HOM05D007129 ORTHO05D008680 1.3e-53 214.9 216 56.9
MELO3C002241.2 Cucumis melo HOM05D007129 ORTHO05D008680 1.7e-53 214.5 186 62.9
Duzib205G1103 Durio zibethinus HOM05D007129 ORTHO05D008680 2.3e-53 214.2 219 57.1
MD06G1180800 Malus domestica HOM05D007129 ORTHO05D008680 2.3e-53 214.2 218 55.5
PSO478G1802 Papaver somniferum HOM05D007129 ORTHO05D008680 2.3e-53 214.2 206 58.3
Gohir.A12G276500 Gossypium hirsutum HOM05D007129 ORTHO05D008680 3.9e-53 213.4 200 57.0
Sc12g0005690 Simmondsia chinensis HOM05D007129 ORTHO05D008680 3.9e-53 213.4 197 58.9
Lj9A453T29 Lonicera japonica HOM05D007129 ORTHO05D008680 5.1e-53 213.0 198 59.6
THA.LOC104821441 Tarenaya hassleriana HOM05D007129 ORTHO05D008680 8.6e-53 212.2 220 53.6
Cpa.g.sc35.61 Carica papaya HOM05D007129 ORTHO05D008680 1.1e-52 211.8 237 53.2
HanXRQChr09g0271771 Helianthus annuus HOM05D007129 ORTHO05D008680 1.5e-52 211.5 225 54.2
Gohir.D12G277500 Gossypium hirsutum HOM05D007129 ORTHO05D008680 1.9e-52 211.1 190 57.9
MSTRG.9665 Avicennia marina HOM05D007129 ORTHO05D008680 2.5e-52 210.7 220 55.5
ECA232G1293 Erigeron canadensis HOM05D000306 ORTHO05D000410 4.3e-52 209.9 216 53.2
Oeu016337.1 Olea europaea HOM05D007129 ORTHO05D008680 7.3e-52 209.1 214 54.2
Carub.0005s1394 Capsella rubella HOM05D007129 ORTHO05D008680 1.2e-51 208.4 198 57.1
Lj4g0013003 Lotus japonicus HOM05D007129 ORTHO05D008680 1.2e-51 208.4 218 53.2
AUR62008280 Chenopodium quinoa HOM05D007129 ORTHO05D008680 2.8e-51 207.2 221 54.8
Glyma.U031407 Glycine max HOM05D007129 ORTHO05D008680 6.2e-51 206.1 187 57.8
Phvul.003G197200 Phaseolus vulgaris HOM05D007129 ORTHO05D008680 6.2e-51 206.1 215 53.0
AL5G27120 Arabidopsis lyrata HOM05D007129 ORTHO05D008680 8.1e-51 205.7 198 57.1
Medtr4g106380 Medicago truncatula HOM05D007129 ORTHO05D008680 8.1e-51 205.7 198 56.1
SalBow6G7050 Salvia bowleyana HOM05D007129 ORTHO05D008680 8.1e-51 205.7 217 53.0
PSO161G0060 Papaver somniferum HOM05D007129 ORTHO05D008680 1.1e-50 205.3 208 57.2
COL.COLO4_04322 Corchorus olitorius HOM05D002131 ORTHO05D008680 3.1e-50 203.8 184 58.2
MBI14_g22548_MAGBIO Magnolia biondii HOM05D007129 ORTHO05D008680 4.0e-50 203.4 250 48.0
Sed0013262 Sechium edule HOM05D007129 ORTHO05D008680 5.2e-50 203.0 171 61.4
ATR1149G142 Amborella trichopoda HOM05D007129 ORTHO05D008680 6.8e-50 202.6 193 52.8
Thhalv10010580m.g Eutrema salsugineum HOM05D007129 ORTHO05D008680 8.9e-50 202.2 203 55.7
Gorai.008G298100 Gossypium raimondii HOM05D007129 ORTHO05D008680 8.9e-50 202.2 199 55.8
TPR.G37473 Trifolium pratense HOM05D007129 ORTHO05D008680 1.5e-49 201.4 221 51.1
arahy.Tifrunner.gnm1.ann1.JUK8XQ Arachis hypogaea HOM05D007129 ORTHO05D008680 2.0e-49 201.1 209 53.1
VMungo1215G0430 Vigna mungo HOM05D007129 ORTHO05D008680 2.0e-49 201.1 192 53.6
Lalb_Chr12g0201391 Lupinus albus HOM05D007129 ORTHO05D008680 2.6e-49 200.7 222 53.2
Psat4g055920 Pisum sativum HOM05D007129 ORTHO05D008680 5.8e-49 199.5 214 51.4
CARHR156520 Cardamine hirsuta HOM05D007129 ORTHO05D008680 7.6e-49 199.1 224 52.7
Sp5g14130 Schrenkiella parvula HOM05D007129 ORTHO05D008680 7.6e-49 199.1 193 55.4
AT3G47830 Arabidopsis thaliana HOM05D007129 ORTHO05D008680 9.9e-49 198.7 218 50.5
arahy.Tifrunner.gnm1.ann1.N0S5JS Arachis hypogaea HOM05D007129 ORTHO05D008680 1.7e-48 198.0 183 56.8
Ca_21890_v3 Cicer arietinum L. HOM05D007129 ORTHO05D008680 1.1e-47 195.3 181 57.5
BcaC09g49826 Brassica carinata HOM05D007129 ORTHO05D008680 7.1e-47 192.6 187 53.5
C01p32560 Brassica napus HOM05D007129 ORTHO05D008680 7.1e-47 192.6 187 53.5
BolC1t03194H Brassica oleracea HOM05D007129 ORTHO05D008680 1.2e-46 191.8 187 52.9
BcaNung06176 Brassica carinata HOM05D007129 ORTHO05D008680 2.7e-46 190.7 188 54.3
Zm00001eb279940 Zea mays HOM05D007129 ORTHO05D008680 4.6e-46 189.9 199 50.3
BraA01t02492Z Brassica rapa HOM05D007129 ORTHO05D008680 1.3e-45 188.3 199 51.8
A01p25760 Brassica napus HOM05D007129 ORTHO05D008680 6.6e-45 186.0 187 52.9
Aa31LG4G16490 Aethionema arabicum HOM05D007129 ORTHO05D008680 2.5e-44 184.1 260 45.0
Manes.06G101100 Manihot esculenta HOM05D007129 ORTHO05D008680 1.1e-42 178.7 218 49.1
AUR62031041 Chenopodium quinoa HOM05D002131 ORTHO05D008680 5.8e-41 172.9 159 58.5
FAN08G0536 Fragaria x ananassa HOM05D002131 ORTHO05D002141 2.2e-40 171.0 159 59.1
SEGI_05000 Sequoiadendron giganteum HOM05D007129 ORTHO05D008680 3.2e-39 167.2 232 42.7
Mapoly0074s0054 Marchantia polymorpha HOM05D007129 ORTHO05D008680 1.3e-35 155.2 213 42.7
CDE04G2311 Ceratophyllum demersum HOM05D007129 ORTHO05D008680 4.5e-33 146.7 111 64.9
BcaB05g23081 Brassica carinata HOM05D007129 ORTHO05D008680 1.3e-32 145.2 188 44.7
Pp3c2_36940 Physcomitrium patens HOM05D007129 ORTHO05D008680 2.2e-32 144.4 202 43.6
Sabra15G0076600 Salix brachista HOM05D007129 ORTHO05D008680 8.4e-32 142.5 120 61.7
AagrBONN_evm.TU.Sc2ySwM_344.1694 Anthoceros agrestis HOM05D007129 ORTHO05D008680 1.9e-31 141.4 249 36.1
Migut.D01796 Erythranthe guttata HOM05D007129 ORTHO05D008680 5.4e-31 139.8 100 71.0
MCO09G188 Micromonas commoda HOM05D007129 ORTHO05D008680 2.1e-30 137.9 183 43.7
HPP92_010837 Vanilla planifolia HOM05D007129 ORTHO05D008680 6.9e-26 122.9 201 37.8
Hma1.2p1_1643F.1_g295190 Hydrangea macrophylla HOM05D007129 ORTHO05D008680 9.3e-23 112.5 116 53.4
Ah.08g219200 Amaranthus hybridus HOM05D007129 ORTHO05D008680 1.6e-22 111.7 130 50.0
ClCG01G014100 Citrullus lanatus HOM05D007129 ORTHO05D008680 1.6e-22 111.7 108 56.5
Ah.05g173910 Amaranthus hybridus HOM05D007129 ORTHO05D008680 7.9e-22 109.4 130 47.7
RcHm_v2.0_Chr3g0449251 Rosa chinensis HOM05D007129 ORTHO05D008680 8.7e-21 105.9 83 63.9
RcHm_v2.0_Chr1g0373441 Rosa chinensis HOM05D007129 ORTHO05D008680 2.4e-18 97.8 67 71.6
GSVIVG01035300001 Vitis vinifera HOM05D000280 ORTHO05D008680 4.2e-15 87.0 65 66.2
PRCOL_00005231 Prasinoderma coloniale HOM05D007129 ORTHO05D008680 1.8e-13 81.6 192 34.4
Os06g0237900 Oryza sativa ssp. japonica HOM05D007129 ORTHO05D008680 2.4e-10 71.2 90 45.6
Cfa026956 Carpinus fangiana HOM05D000198 ORTHO05D008680 1.9e-07 61.6 246 28.0
C03p72050 Brassica napus HOM05D007129 ORTHO05D008680 3.6e-06 57.4 63 46.0


User provided reference genes

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