Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 3.3e-192 674.9 339 100.0
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 1.3e-156 556.6 309 90.6
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 2.3e-153 545.8 328 83.8
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 4.0e-153 545.0 309 87.4
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 5.2e-153 544.7 327 85.0
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 2.6e-152 542.3 309 87.7
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 2.6e-152 542.3 309 88.0
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 3.3e-152 542.0 322 85.7
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 3.3e-152 542.0 314 86.3
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 1.8e-150 536.2 309 86.7
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.2e-149 533.5 309 86.1
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 2.0e-149 532.7 307 86.0
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 2.0e-149 532.7 307 86.0
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 3.5e-149 531.9 309 86.4
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 1.0e-148 530.4 319 83.4
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 1.3e-148 530.0 308 85.4
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 1.7e-148 529.6 309 85.4
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 5.0e-148 528.1 318 83.3
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 8.5e-148 527.3 337 80.4
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 1.9e-147 526.2 308 85.4
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 2.5e-147 525.8 308 84.7
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 9.4e-147 523.9 309 84.1
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 1.2e-146 523.5 309 83.5
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 1.2e-146 523.5 310 83.9
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 1.6e-146 523.1 332 80.7
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 2.1e-146 522.7 330 80.0
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 2.7e-146 522.3 310 83.9
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 3.6e-146 521.9 307 84.7
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 4.7e-146 521.5 308 84.7
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 4.7e-146 521.5 308 84.7
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 6.1e-146 521.2 307 84.0
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.4e-145 520.0 307 83.7
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 1.4e-145 520.0 309 84.1
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 2.3e-145 519.2 307 84.0
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 2.3e-145 519.2 307 84.0
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 3.0e-145 518.8 307 83.7
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 3.0e-145 518.8 323 81.4
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 4.0e-145 518.5 309 83.5
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 5.2e-145 518.1 307 84.0
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 5.2e-145 518.1 309 83.8
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 6.8e-145 517.7 307 83.7
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 6.8e-145 517.7 307 83.7
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 6.8e-145 517.7 307 83.7
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 1.2e-144 516.9 334 78.7
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 1.2e-144 516.9 308 84.4
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 2.6e-144 515.8 307 83.7
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 3.4e-144 515.4 309 83.8
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 4.4e-144 515.0 325 81.5
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 5.7e-144 514.6 308 83.8
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 1.7e-143 513.1 299 86.6
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 1.7e-143 513.1 308 83.4
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 2.2e-143 512.7 307 82.7
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 6.3e-143 511.1 309 81.6
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 8.3e-143 510.8 307 82.4
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 3.1e-142 508.8 307 82.4
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 4.1e-142 508.4 319 80.6
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 5.4e-142 508.1 309 81.9
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 1.6e-141 506.5 340 79.4
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 1.0e-140 503.8 314 80.6
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 1.3e-140 503.4 300 84.0
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 3.8e-140 501.9 310 81.3
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 5.0e-140 501.5 307 82.1
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 1.5e-139 500.0 325 78.5
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 6.8e-137 491.1 307 78.5
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 1.7e-135 486.5 305 79.3
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.1e-134 483.8 349 71.3
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 4.1e-134 481.9 366 69.7
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 2.7e-133 479.2 337 73.6
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 2.3e-132 476.1 309 78.0
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 2.3e-132 476.1 331 74.9
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 3.8e-132 475.3 309 78.0
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 8.6e-132 474.2 263 88.6
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 3.0e-129 465.7 310 77.7
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 3.0e-129 465.7 321 76.0
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.5e-128 463.4 299 77.3
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 2.0e-128 463.0 344 72.4
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 5.8e-128 461.5 307 77.9
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 9.8e-128 460.7 312 75.6
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 2.2e-127 459.5 265 86.8
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 6.0e-125 451.4 345 70.4
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 6.0e-125 451.4 311 75.6
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 6.0e-125 451.4 499 53.7
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 1.8e-121 439.9 351 66.1
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 2.3e-121 439.5 309 75.7
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 9.8e-120 434.1 419 58.7
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.9e-119 432.6 316 72.2
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 8.3e-119 431.0 289 76.1
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 1.4e-118 430.3 308 70.1
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 9.5e-115 417.5 308 67.5
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 3.6e-114 415.6 308 68.2
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.8e-113 413.3 261 80.8
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 5.8e-112 408.3 305 68.9
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 1.3e-111 407.1 262 80.5
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.9e-110 403.3 252 80.2
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 3.2e-110 402.5 299 71.9
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 3.9e-108 395.6 259 77.2
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 2.5e-107 392.9 307 68.1
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 2.5e-107 392.9 240 82.1
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 3.6e-106 389.0 296 64.5
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 2.4e-105 386.3 244 80.3
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 3.5e-101 372.5 255 74.9
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 1.0e-100 370.9 262 69.1
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 3.1e-97 359.4 219 83.1
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.5e-96 357.1 310 62.3
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 7.8e-93 344.7 209 81.8
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 2.8e-90 336.3 228 71.9
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 2.6e-88 329.7 307 59.9
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.9e-86 323.6 300 55.7
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 9.0e-73 278.1 302 50.7
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 1.7e-71 273.9 177 77.4
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 1.4e-70 270.8 184 74.5
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 3.3e-67 259.6 195 71.8
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 8.2e-66 255.0 176 71.6
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 8.5e-63 245.0 158 77.2
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 1.4e-62 244.2 157 80.3
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 1.8e-57 227.3 144 80.6
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 9.1e-57 224.9 488 34.0
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.2e-56 224.6 120 90.8
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 1.7e-55 220.7 120 88.3
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 1.6e-45 187.6 113 80.5
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 2.0e-43 180.6 228 48.7
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.3e-42 177.9 270 36.3
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 6.3e-42 175.6 99 85.9
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 6.5e-31 139.0 288 33.0
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 8.8e-28 128.6 66 92.4
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 7.5e-27 125.6 276 29.3
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 9.1e-25 118.6 58 98.3
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 7.7e-24 115.5 56 98.2
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.3e-23 114.0 63 87.3
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 5.0e-23 112.8 73 80.8
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.1e-22 111.7 57 94.7
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 5.5e-22 109.4 70 74.3
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 5.7e-19 99.4 73 72.6
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 2.0e-11 74.3 65 58.5
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 5.8e-11 72.8 43 79.1
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.7e-10 71.2 33 93.9
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 3.5e-08 63.5 55 58.2
Potri.003G015700 Populus trichocarpa HOM05D005536 ORTHO05D006999 9.5e-06 55.5 111 30.6


User provided reference genes

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