Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 0.0e+00 1168.3 697 100.0
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 9.4e-242 840.5 700 77.3
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 2.5e-218 762.7 672 72.9
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 4.2e-218 761.9 690 71.3
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 2.9e-211 739.2 686 70.0
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 2.5e-210 736.1 693 69.0
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 3.0e-208 729.2 687 70.2
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 3.0e-208 729.2 699 70.5
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 5.2e-208 728.4 688 66.6
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 8.3e-206 721.1 701 68.0
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 3.1e-205 719.2 701 67.6
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 5.4e-205 718.4 684 67.8
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 5.4e-205 718.4 683 68.8
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 4.5e-204 715.3 688 67.6
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 1.1e-202 710.7 662 70.4
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 1.9e-202 709.9 681 70.0
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 7.3e-202 708.0 679 68.2
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 1.2e-201 707.2 689 62.7
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 3.6e-201 705.7 695 67.2
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 4.7e-201 705.3 691 68.0
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 8.0e-201 704.5 680 68.2
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.4e-200 703.7 687 66.8
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 1.4e-200 703.7 712 62.1
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 1.4e-200 703.7 688 68.9
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 4.0e-200 702.2 663 69.8
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 1.2e-199 700.7 674 69.7
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 2.0e-199 699.9 662 69.9
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 6.4e-198 694.9 662 69.2
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 7.0e-197 691.4 673 67.6
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 9.2e-197 691.0 673 68.1
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 9.2e-197 691.0 673 67.6
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 9.2e-197 691.0 673 67.6
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 9.2e-197 691.0 673 68.1
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 9.2e-197 691.0 688 67.3
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 1.2e-196 690.6 673 67.8
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 3.5e-196 689.1 696 67.0
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 8.6e-195 684.5 662 68.3
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 1.1e-194 684.1 685 66.7
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 1.5e-194 683.7 687 65.5
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 1.9e-194 683.3 696 66.2
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 1.9e-194 683.3 694 66.0
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 2.5e-194 682.9 549 78.0
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 9.5e-194 681.0 685 66.7
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 1.2e-193 680.6 635 70.2
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 1.6e-193 680.2 673 65.7
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 2.1e-193 679.9 650 69.2
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.8e-192 676.8 687 61.1
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 1.8e-192 676.8 673 67.3
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 2.3e-192 676.4 673 66.9
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 3.1e-192 676.0 673 66.3
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 4.4e-191 672.2 662 67.4
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 5.8e-191 671.8 683 62.8
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 2.2e-190 669.8 673 65.8
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 3.7e-190 669.1 662 67.2
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 1.4e-189 667.2 685 62.5
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 3.2e-189 666.0 673 66.1
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 1.2e-188 664.1 663 66.8
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 1.6e-188 663.7 685 66.0
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 4.6e-188 662.1 646 68.4
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 6.0e-188 661.8 655 67.8
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 2.3e-187 659.8 687 65.2
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 3.0e-187 659.4 687 65.2
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 5.0e-187 658.7 678 65.8
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 6.6e-187 658.3 690 64.5
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 6.6e-187 658.3 661 66.7
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.1e-186 657.5 664 65.2
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 1.9e-186 656.8 655 66.9
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 4.3e-186 655.6 663 66.1
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 5.6e-186 655.2 661 66.0
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 2.8e-185 652.9 663 66.1
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 6.2e-185 651.7 693 63.9
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 6.2e-185 651.7 662 62.8
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 6.2e-185 651.7 665 66.0
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 1.1e-184 651.0 698 62.9
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 1.1e-184 651.0 682 66.0
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 3.1e-184 649.4 693 64.6
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 5.2e-184 648.7 661 64.9
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 4.4e-183 645.6 550 75.1
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 4.4e-183 645.6 663 67.3
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 7.5e-183 644.8 663 66.8
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 1.7e-182 643.7 682 65.7
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 2.2e-182 643.3 663 67.6
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 4.9e-182 642.1 687 60.4
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 1.4e-181 640.6 684 65.9
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 1.9e-181 640.2 663 67.4
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 2.4e-181 639.8 666 65.5
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 5.4e-181 638.6 683 63.5
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 1.2e-180 637.5 663 65.6
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 4.6e-180 635.6 683 63.7
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 4.6e-180 635.6 688 65.4
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 1.3e-179 634.0 719 61.5
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 1.2e-177 627.5 712 61.4
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 5.2e-176 622.1 682 57.5
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 5.2e-176 622.1 669 63.1
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 3.4e-175 619.4 667 64.3
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 2.9e-174 616.3 659 53.9
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 6.4e-174 615.1 680 63.8
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 1.4e-173 614.0 667 64.5
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 1.9e-173 613.6 679 60.8
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 2.4e-173 613.2 711 58.6
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 3.0e-171 606.3 574 59.1
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 4.3e-170 602.4 595 67.6
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 3.6e-169 599.4 686 58.0
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 1.4e-168 597.4 686 60.5
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 3.1e-168 596.3 673 62.7
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 2.3e-163 580.1 618 64.9
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 5.6e-162 575.5 611 64.8
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 2.8e-161 573.2 680 60.3
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 4.5e-159 565.8 711 57.7
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 1.9e-157 560.5 663 55.5
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 6.9e-152 542.0 659 56.6
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 3.5e-148 529.6 531 68.5
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 3.7e-145 519.6 666 55.6
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 2.0e-143 513.8 537 67.2
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 3.5e-140 503.1 662 59.2
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 6.3e-137 492.3 678 50.6
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 8.2e-137 491.9 629 56.6
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 1.1e-130 471.5 717 54.3
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 1.1e-128 464.9 536 64.2
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 3.4e-127 459.9 506 63.0
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 2.9e-126 456.8 536 63.2
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.1e-122 444.9 275 77.8
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 1.5e-122 444.5 512 62.7
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 7.7e-119 432.2 545 54.9
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 2.4e-112 410.6 584 59.2
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 1.5e-109 401.4 263 74.9
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 1.1e-104 385.2 465 48.6
TAR629G0485 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.1e-101 375.2 322 65.2
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 3.7e-97 360.1 476 56.3
vmacro17776 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 2.8e-92 344.0 319 62.7
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 7.5e-82 309.3 197 73.1
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 2.7e-79 300.8 218 71.6
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 1.2e-74 285.4 304 74.7
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 2.8e-68 264.2 214 64.0
Zm00001eb398230 Zea mays HOM05D003766 ORTHO05D004607 4.4e-66 256.9 305 51.1
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 5.4e-64 250.0 317 66.2
BcaC04g22654 Brassica carinata HOM05D003766 ORTHO05D004607 9.2e-64 249.2 202 65.3
BcaC07g36877 Brassica carinata HOM05D003766 ORTHO05D004607 4.9e-57 226.9 308 48.1
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 8.4e-57 226.1 336 45.5
QL10p029813 Quercus lobata HOM05D003766 ORTHO05D004607 8.4e-49 199.5 311 44.1
BolC7t40944H Brassica oleracea HOM05D003766 ORTHO05D004607 2.4e-48 198.0 137 72.3
HPP92_011087 Vanilla planifolia HOM05D003766 ORTHO05D004607 5.1e-46 190.3 240 50.8
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 1.9e-45 188.3 131 67.2
C02p31190 Brassica napus HOM05D003766 ORTHO05D004607 5.6e-45 186.8 310 42.9
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 2.2e-41 174.9 288 66.7
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 1.1e-40 172.6 87 89.7
C09p56670 Brassica napus HOM05D003766 ORTHO05D004607 2.4e-40 171.4 111 76.6
BolC1t04841H Brassica oleracea HOM05D003766 ORTHO05D004607 3.9e-38 164.1 111 73.9
Cre03.g197400 Chlamydomonas reinhardtii HOM05D003766 ORTHO05D004607 1.1e-37 162.5 600 34.3
COL.COLO4_04913 Corchorus olitorius HOM05D003766 ORTHO05D004607 4.2e-32 144.1 194 50.5
MCO08G236 Micromonas commoda HOM05D003766 ORTHO05D004607 9.3e-32 142.9 179 46.9
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-31 142.1 322 47.5
QL10p030223 Quercus lobata HOM05D003766 ORTHO05D004607 6.0e-31 140.2 166 51.2
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 1.3e-30 139.0 155 49.7
Cfa023117 Carpinus fangiana HOM05D016742 ORTHO05D028589 3.3e-29 134.4 546 33.9
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 3.5e-23 114.4 93 63.4
PRCOL_00002904 Prasinoderma coloniale HOM05D003766 ORTHO05D004607 4.6e-23 114.0 202 34.2
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.0e-22 112.8 98 62.2
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 6.7e-22 110.2 98 62.2
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.1e-21 109.4 107 56.1
C08p01510 Brassica napus HOM05D003766 ORTHO05D004607 9.4e-16 89.7 69 63.8
BraA05t20732Z Brassica rapa HOM05D003766 ORTHO05D004607 1.1e-13 82.8 68 57.4
BolC9t56024H Brassica oleracea HOM05D021712 ORTHO05D021656 2.0e-13 82.0 62 62.9
A05p35970 Brassica napus HOM05D003766 ORTHO05D004607 1.7e-12 79.0 63 58.7
A02p18780 Brassica napus HOM05D003766 ORTHO05D004607 1.8e-11 75.5 84 52.4
C09p31690 Brassica napus HOM05D021712 ORTHO05D021656 1.2e-10 72.8 64 54.7
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.2e-10 72.8 68 55.9
Oeu002213.1 Olea europaea HOM05D003766 ORTHO05D004607 1.7e-09 68.9 180 31.1
A02p18790 Brassica napus HOM05D003766 ORTHO05D004607 2.9e-09 68.2 48 60.4
C07p05430 Brassica napus HOM05D003766 ORTHO05D016749 1.4e-08 65.9 49 57.1
CBR_g40333 Chara braunii HOM05D003766 ORTHO05D004607 1.4e-08 65.9 126 36.5
A02p21490 Brassica napus HOM05D021712 ORTHO05D021656 1.9e-08 65.5 65 49.2
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 4.2e-08 64.3 50 54.0
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 7.2e-08 63.5 54 57.4
BcaC04g21445 Brassica carinata HOM05D000349 ORTHO05D001782 3.6e-07 61.2 64 48.4
Glyma.15G140700 Glycine max HOM05D003766 ORTHO05D004607 1.0e-06 59.7 80 43.8
BraA05t22403Z Brassica rapa HOM05D003766 ORTHO05D004607 3.0e-06 58.2 44 59.1


User provided reference genes

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