Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.4e-299 1031.6 592 100.0
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.6e-295 1018.8 590 94.1
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 6.1e-133 478.8 564 47.9
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 3.5e-128 463.0 531 47.8
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 6.5e-127 458.8 533 47.3
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 8.5e-127 458.4 592 45.8
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 1.1e-126 458.0 572 46.7
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 7.2e-126 455.3 592 45.4
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 9.4e-126 454.9 567 45.5
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 1.0e-124 451.4 567 46.7
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 3.0e-124 449.9 556 47.3
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 3.0e-124 449.9 548 49.8
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.6e-123 446.8 578 46.0
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.3e-122 444.5 320 78.1
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 4.8e-122 442.6 573 45.7
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 2.4e-121 440.3 568 49.1
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 3.1e-121 439.9 566 45.4
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 2.0e-120 437.2 554 49.1
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 7.7e-120 435.3 556 46.0
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 1.0e-116 424.9 558 47.5
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 5.2e-116 422.5 583 46.5
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 5.2e-116 422.5 557 44.0
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 2.6e-115 420.2 552 43.3
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 5.7e-115 419.1 576 46.0
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 2.8e-114 416.8 574 44.9
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 3.7e-114 416.4 569 46.7
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 8.3e-114 415.2 592 43.2
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 1.1e-113 414.8 555 43.1
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 3.1e-113 413.3 569 46.0
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 5.4e-113 412.5 550 46.5
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 7.0e-113 412.1 558 45.3
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 1.6e-112 411.0 573 42.9
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 1.6e-112 411.0 573 42.9
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 2.7e-112 410.2 541 42.5
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.7e-112 410.2 574 44.6
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.0e-111 408.3 572 44.8
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 1.7e-111 407.5 578 48.1
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 2.2e-111 407.1 573 42.8
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 2.2e-111 407.1 548 44.2
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 2.9e-111 406.8 546 43.2
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 3.8e-111 406.4 568 41.9
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 5.0e-111 406.0 559 43.6
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 1.1e-110 404.8 555 47.0
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 9.4e-110 401.7 565 47.3
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 1.6e-109 401.0 562 43.8
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 1.6e-109 401.0 546 47.1
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 3.6e-109 399.8 585 41.0
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 4.7e-109 399.4 546 42.5
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 6.1e-109 399.1 544 41.9
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 2.3e-108 397.1 546 43.8
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.2e-107 394.8 453 51.7
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 1.2e-107 394.8 575 46.6
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 7.5e-107 392.1 555 42.9
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 1.3e-106 391.3 540 45.4
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 2.8e-106 390.2 546 43.6
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 2.8e-106 390.2 628 40.3
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 6.3e-106 389.0 544 41.7
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 8.3e-106 388.7 537 42.6
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 8.3e-106 388.7 562 41.8
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 2.4e-105 387.1 588 40.3
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 5.4e-105 386.0 586 43.3
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 1.6e-104 384.4 545 40.6
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 2.0e-104 384.0 576 45.3
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 2.7e-104 383.6 541 41.4
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 1.0e-103 381.7 555 41.8
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.3e-103 381.3 546 41.9
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 2.3e-103 380.6 546 45.6
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 2.9e-103 380.2 503 50.7
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 2.9e-103 380.2 546 40.7
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 2.9e-103 380.2 587 40.7
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 6.6e-103 379.0 564 43.8
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 1.1e-102 378.3 551 41.2
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 5.5e-102 375.9 553 47.4
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 7.2e-102 375.6 559 41.3
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 7.2e-102 375.6 545 45.3
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 9.5e-102 375.2 540 40.9
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 9.5e-102 375.2 556 42.8
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 1.6e-101 374.4 553 47.6
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 3.6e-101 373.2 553 47.4
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 6.8e-100 369.0 546 39.6
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 1.5e-99 367.9 558 45.7
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 2.0e-99 367.5 550 40.5
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 2.6e-99 367.1 546 42.5
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 5.7e-99 365.9 547 39.1
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 7.5e-99 365.5 566 42.6
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 7.5e-99 365.5 534 40.8
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.3e-98 364.8 582 41.9
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 6.3e-98 362.5 528 41.1
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 8.3e-98 362.1 549 42.8
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 1.4e-97 361.3 549 38.8
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 3.2e-97 360.1 549 37.9
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 7.0e-97 359.0 574 40.1
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 4.6e-96 356.3 550 38.4
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 1.7e-95 354.4 562 40.6
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 2.3e-92 344.0 560 41.4
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 2.2e-90 337.4 546 38.6
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 1.9e-89 334.3 567 36.5
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 1.9e-89 334.3 571 39.8
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 2.4e-89 334.0 535 40.6
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 4.1e-89 333.2 549 36.1
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 5.4e-89 332.8 567 36.3
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 4.6e-88 329.7 545 38.7
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 1.3e-87 328.2 550 39.6
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 6.6e-87 325.9 567 35.8
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 7.3e-86 322.4 570 34.9
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 2.8e-85 320.5 471 44.6
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 4.7e-85 319.7 544 37.5
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 6.2e-85 319.3 567 35.3
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 1.1e-84 318.5 567 35.1
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 3.1e-84 317.0 366 50.8
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 1.2e-83 315.1 543 35.2
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 2.6e-83 313.9 464 40.9
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 2.2e-82 310.8 547 36.9
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 2.9e-82 310.5 537 35.9
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 1.9e-78 297.7 364 45.9
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 7.3e-78 295.8 565 38.6
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 4.0e-76 290.0 548 36.5
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.2e-75 288.5 267 58.1
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 1.1e-73 282.0 473 39.3
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 7.1e-73 279.3 444 42.3
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.3e-71 275.0 551 39.4
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 2.3e-71 274.2 450 38.4
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 2.3e-71 274.2 389 40.6
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 4.3e-70 270.0 469 39.0
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 8.9e-68 262.3 449 38.3
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 1.5e-67 261.5 537 33.0
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 7.8e-64 249.2 542 34.3
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.1e-62 245.4 261 51.0
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 3.4e-59 233.8 141 88.7
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 2.1e-56 224.6 409 34.0
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.3e-55 221.9 439 35.5
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 4.2e-49 200.3 250 44.8
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 9.0e-44 182.6 250 46.0
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 1.2e-40 172.2 332 32.2
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 1.0e-39 169.1 402 32.3
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 6.7e-39 166.4 228 45.6
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 2.4e-36 157.9 248 37.1
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 7.6e-35 152.9 459 27.2
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 1.3e-34 152.1 534 25.5
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 4.2e-33 147.1 209 44.5
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 7.9e-32 142.9 153 52.9
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.3e-31 141.4 167 49.7
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 1.5e-27 128.6 541 26.1
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 2.0e-27 128.3 510 23.7
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.6e-27 127.9 105 58.1
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 4.2e-25 120.6 120 55.0
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 1.0e-23 115.9 154 44.2
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 3.9e-23 114.0 566 21.6
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 5.1e-23 113.6 154 41.6
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 9.7e-22 109.4 161 34.2
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.3e-21 109.0 125 44.0
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 1.7e-21 108.6 162 41.4
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.4e-20 105.5 164 39.0
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.6e-19 101.3 107 51.4
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 5.9e-19 100.1 208 32.2
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 2.2e-18 98.2 151 38.4
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 2.9e-18 97.8 234 32.9
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 5.0e-18 97.1 145 37.9
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 1.0e-15 89.4 510 21.8
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 2.0e-14 85.1 147 35.4
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 4.4e-14 84.0 97 47.4
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 5.7e-14 83.6 62 71.0
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 5.7e-14 83.6 62 71.0
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.2e-13 81.6 71 60.6
Pp3c11_11580 Physcomitrium patens HOM05D003578 ORTHO05D004021 2.8e-13 81.3 445 23.8
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 3.1e-12 77.8 70 54.3
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 4.1e-12 77.4 126 37.3
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.6e-11 75.5 118 34.7
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 7.7e-11 73.2 138 34.8
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 5.0e-10 70.5 118 33.9
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea HOM05D003578 ORTHO05D004021 8.5e-10 69.7 89 41.6
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.1e-09 69.3 79 48.1
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 7.2e-09 66.6 71 49.3
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 9.4e-09 66.2 133 34.6
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 1.2e-08 65.9 68 54.4
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.2e-08 65.9 103 42.7
AagrBONN_evm.TU.Sc2ySwM_228.1577 Anthoceros agrestis HOM05D003578 ORTHO05D004021 3.6e-08 64.3 356 20.2
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 3.6e-08 64.3 123 33.3
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 1.4e-07 62.4 122 35.2
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 1.5e-06 58.9 54 53.7


User provided reference genes

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