Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03803 Aquilegia oxysepala HOM05D028087 ORTHO05D077627 2.1e-224 782.3 483 100.0
Aqoxy4G02115 Aquilegia oxysepala HOM05D028087 ORTHO05D078758 5.5e-132 475.3 544 69.5
Aqoxy5G02031 Aquilegia oxysepala HOM05D028087 ORTHO05D078291 7.9e-30 136.0 184 69.0
Aqoxy3G00074 Aquilegia oxysepala HOM05D000200 ORTHO05D000262 8.4e-24 115.9 98 66.3
Aqoxy7G00426 Aquilegia oxysepala HOM05D002884 ORTHO05D003178 1.4e-18 98.6 70 71.4
TAR375G0217 Trochodendron aralioides HOM05D002884 ORTHO05D003178 5.7e-12 76.6 72 59.7
TAR629G1766 Trochodendron aralioides HOM05D002884 ORTHO05D003178 5.7e-12 76.6 72 61.1
TAR629G3349 Trochodendron aralioides HOM05D002884 ORTHO05D003178 5.7e-12 76.6 72 61.1
MBI12_g29747_MAGBIO Magnolia biondii HOM05D002884 ORTHO05D003178 1.7e-11 75.1 72 59.7
TAR636G2592 Trochodendron aralioides HOM05D002884 ORTHO05D003178 8.2e-11 72.8 72 59.7
Dinv37684 Davidia involucrata HOM05D002884 ORTHO05D003178 1.0e-08 65.9 72 51.4
arahy.Tifrunner.gnm1.ann1.00WUVK Arachis hypogaea HOM05D002884 ORTHO05D003178 1.3e-08 65.5 70 51.4
arahy.Tifrunner.gnm1.ann1.2WQF85 Arachis hypogaea HOM05D002884 ORTHO05D003178 1.3e-08 65.5 70 51.4
PGR042G2076 Punica granatum HOM05D002884 ORTHO05D003178 1.3e-08 65.5 70 51.4
Dinv39004 Davidia involucrata HOM05D002884 ORTHO05D003178 1.7e-08 65.1 60 58.3
Peaxi162Scf00714g00057 Petunia axillaris HOM05D002884 ORTHO05D003178 1.7e-08 65.1 72 51.4
Aqoxy6G01981 Aquilegia oxysepala HOM05D002884 ORTHO05D003178 3.8e-08 63.9 67 53.7
Sabra03G0086200 Salix brachista HOM05D002884 ORTHO05D003178 5.0e-08 63.5 58 56.9
Hma1.2p1_0371F.1_g138100 Hydrangea macrophylla HOM05D002884 ORTHO05D003178 6.5e-08 63.2 72 51.4
Potri.003G122300 Populus trichocarpa HOM05D002884 ORTHO05D003178 6.5e-08 63.2 59 59.3
Actinidia02037 Actinidia chinensis HOM05D002884 ORTHO05D003178 1.1e-07 62.4 72 51.4
Aqoxy7G01124 Aquilegia oxysepala HOM05D000200 ORTHO05D000262 1.1e-07 62.4 90 43.3
PSO478G0346 Papaver somniferum HOM05D002884 ORTHO05D003178 1.1e-07 62.4 70 50.0
PSO782G3187 Papaver somniferum HOM05D002884 ORTHO05D003178 1.1e-07 62.4 70 50.0
Hma1.2p1_0514F.1_g170040 Hydrangea macrophylla HOM05D002884 ORTHO05D003178 1.4e-07 62.0 72 51.4
MBI05_g23625_MAGBIO Magnolia biondii HOM05D000200 ORTHO05D000262 1.9e-07 61.6 100 40.0
TWI60G1702 Tripterygium wilfordii HOM05D002884 ORTHO05D003178 2.5e-07 61.2 70 50.0
MSTRG.12015 Avicennia marina HOM05D002884 ORTHO05D003178 3.2e-07 60.8 70 50.0
Ciclev10010443m.g Citrus clementina HOM05D000200 ORTHO05D000262 3.2e-07 60.8 100 41.0
Glyma.05G049200 Glycine max HOM05D002884 ORTHO05D003178 3.2e-07 60.8 70 50.0
Lj2g0016961 Lotus japonicus HOM05D002884 ORTHO05D003178 3.2e-07 60.8 70 47.1
Nn1g01376 Nelumbo nucifera HOM05D002884 ORTHO05D003178 3.2e-07 60.8 107 41.1
Potri.001G109500 Populus trichocarpa HOM05D002884 ORTHO05D003178 3.2e-07 60.8 58 55.2
SalBow6G0746 Salvia bowleyana HOM05D002884 ORTHO05D003178 3.2e-07 60.8 72 45.8
Haze_08941 Corylus avellana HOM05D002884 ORTHO05D003178 4.2e-07 60.5 70 48.6
Lalb_Chr16g0377211 Lupinus albus HOM05D002884 ORTHO05D003178 4.2e-07 60.5 70 47.1
Nn8g38752 Nelumbo nucifera HOM05D000200 ORTHO05D000262 4.2e-07 60.5 99 40.4
Actinidia14527 Actinidia chinensis HOM05D002884 ORTHO05D003178 5.5e-07 60.1 72 50.0
Lalb_Chr09g0321151 Lupinus albus HOM05D002884 ORTHO05D003178 5.5e-07 60.1 70 45.7
PSO210G4146 Papaver somniferum HOM05D000200 ORTHO05D000262 5.5e-07 60.1 93 40.9
CSS0002116 Camellia sinensis var. sinensis HOM05D002884 ORTHO05D003178 7.2e-07 59.7 72 48.6
Gohir.D10G058600 Gossypium hirsutum HOM05D000200 ORTHO05D000262 7.2e-07 59.7 91 40.7
Gorai.011G062700 Gossypium raimondii HOM05D000200 ORTHO05D000262 7.2e-07 59.7 91 40.7
PSO210G3579 Papaver somniferum HOM05D000200 ORTHO05D000262 7.2e-07 59.7 93 40.9
QL12p017410 Quercus lobata HOM05D002884 ORTHO05D003178 7.2e-07 59.7 70 48.6
TAR624G0222 Trochodendron aralioides HOM05D000200 ORTHO05D000262 7.2e-07 59.7 76 47.4
HanXRQChr13g0416781 Helianthus annuus HOM05D002884 ORTHO05D003178 9.4e-07 59.3 72 47.2
unitig_26.g9176 Utricularia gibba HOM05D000200 ORTHO05D000262 9.4e-07 59.3 83 42.2
CAN.G981.24 Capsicum annuum HOM05D002884 ORTHO05D003178 1.2e-06 58.9 60 55.0
DCAR_006758 Daucus carota HOM05D002884 ORTHO05D003178 1.2e-06 58.9 71 47.9
Eucgr.E00535 Eucalyptus grandis HOM05D002884 ORTHO05D003178 1.2e-06 58.9 58 56.9
Glyma.17G131100 Glycine max HOM05D002884 ORTHO05D003178 1.2e-06 58.9 70 48.6
Lsat_1_v5_gn_3_5420 Lactuca sativa HOM05D002884 ORTHO05D003178 1.2e-06 58.9 74 45.9
Nn6g34230 Nelumbo nucifera HOM05D002884 ORTHO05D003178 1.2e-06 58.9 70 52.9
Prupe.5G091800 Prunus persica HOM05D002884 ORTHO05D003178 1.2e-06 58.9 70 48.6
TPR.G19228 Trifolium pratense HOM05D002884 ORTHO05D003178 1.2e-06 58.9 93 40.9
MBI05_g41531_MAGBIO Magnolia biondii HOM05D000200 ORTHO05D000262 1.6e-06 58.5 90 42.2
MBI05_g42259_MAGBIO Magnolia biondii HOM05D000200 ORTHO05D000262 1.6e-06 58.5 90 42.2
Atru.chr1.3815 Acer truncatum HOM05D000200 ORTHO05D000262 2.1e-06 58.2 95 40.0
DCAR_017785 Daucus carota HOM05D002884 ORTHO05D003178 2.1e-06 58.2 71 47.9
Medtr4g102810 Medicago truncatula HOM05D002884 ORTHO05D003178 2.1e-06 58.2 61 54.1
Nitab4.5_0002842g0060 Nicotiana tabacum HOM05D000200 ORTHO05D000262 2.1e-06 58.2 94 41.5
Nitab4.5_0002853g0040 Nicotiana tabacum HOM05D002884 ORTHO05D003178 2.1e-06 58.2 60 55.0
Rhsim11G0003600 Rhododendron simsii HOM05D002884 ORTHO05D003178 2.1e-06 58.2 72 47.2
Solyc08g080410.3 Solanum lycopersicum HOM05D002884 ORTHO05D003178 2.1e-06 58.2 60 53.3
Haze_25956 Corylus avellana HOM05D000200 ORTHO05D000262 2.7e-06 57.8 91 39.6
Dinv36801 Davidia involucrata HOM05D000200 ORTHO05D000262 2.7e-06 57.8 100 39.0
Nitab4.5_0002079g0080 Nicotiana tabacum HOM05D000200 ORTHO05D000262 2.7e-06 57.8 90 42.2
Phvul.003G133500 Phaseolus vulgaris HOM05D000200 ORTHO05D000262 2.7e-06 57.8 100 41.0
RcHm_v2.0_Chr7g0199121 Rosa chinensis HOM05D002884 ORTHO05D003178 2.7e-06 57.8 70 47.1
Sabra01G0082800 Salix brachista HOM05D002884 ORTHO05D003178 2.7e-06 57.8 58 53.4
SEGI_16894 Sequoiadendron giganteum HOM05D002884 ORTHO05D003178 2.7e-06 57.8 70 50.0
Sopen08g028740 Solanum pennellii HOM05D002884 ORTHO05D003178 2.7e-06 57.8 60 53.3
PGSC0003DMG400003048 Solanum tuberosum HOM05D002884 ORTHO05D003178 2.7e-06 57.8 60 53.3
CANSAT21G2344 Cannabis sativa HOM05D002884 ORTHO05D003178 3.6e-06 57.4 70 50.0
Ca_20250_v3 Cicer arietinum L. HOM05D002884 ORTHO05D003178 3.6e-06 57.4 73 47.9
Cc06_g11840 Coffea canephora HOM05D000200 ORTHO05D000262 3.6e-06 57.4 90 40.0
Gohir.A10G056700 Gossypium hirsutum HOM05D000200 ORTHO05D000262 3.6e-06 57.4 84 41.7
Lj8A238T60 Lonicera japonica HOM05D002884 ORTHO05D003178 3.6e-06 57.4 72 50.0
vmacro06307 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 3.6e-06 57.4 94 39.4
Atru.chr7.1653 Acer truncatum HOM05D000200 ORTHO05D000262 4.7e-06 57.0 90 38.9
Lsat_1_v5_gn_6_87540 Lactuca sativa HOM05D002884 ORTHO05D003178 4.7e-06 57.0 78 47.4
MD02G1085600 Malus domestica HOM05D000200 ORTHO05D000262 4.7e-06 57.0 99 36.4
MD06G1073600 Malus domestica HOM05D002884 ORTHO05D003178 4.7e-06 57.0 90 41.1
CSS0004594 Camellia sinensis var. sinensis HOM05D002884 ORTHO05D003178 6.1e-06 56.6 60 51.7
Nn6g35562 Nelumbo nucifera HOM05D000200 ORTHO05D000262 6.1e-06 56.6 95 42.1
Nitab4.5_0002234g0060 Nicotiana tabacum HOM05D002884 ORTHO05D003178 6.1e-06 56.6 139 33.1
CiPaw.03G210800 Carya illinoinensis HOM05D000200 ORTHO05D000262 7.9e-06 56.2 90 42.2
Lj7C681T4 Lonicera japonica HOM05D000200 ORTHO05D000262 7.9e-06 56.2 100 39.0
MBI04_g00304_MAGBIO Magnolia biondii HOM05D002884 ORTHO05D003178 7.9e-06 56.2 72 47.2
Sabra01G0156200 Salix brachista HOM05D000200 ORTHO05D000262 7.9e-06 56.2 100 37.0
SHI27904 Sapria himalayana HOM05D000200 ORTHO05D000262 7.9e-06 56.2 83 39.8
TWI81G0934 Tripterygium wilfordii HOM05D002884 ORTHO05D003178 7.9e-06 56.2 70 50.0


User provided reference genes

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