Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03527 Aquilegia oxysepala HOM05D004913 ORTHO05D006150 2.0e-150 536.2 360 100.0
TAR636G2191 Trochodendron aralioides HOM05D004913 ORTHO05D006150 2.3e-95 353.2 313 67.7
Duzib052G0554 Durio zibethinus HOM05D004913 ORTHO05D006150 4.1e-92 342.4 326 63.2
Thecc.04G244000 Theobroma cacao HOM05D004913 ORTHO05D006150 1.6e-91 340.5 326 62.9
vmacro15402 Vaccinium macrocarpon HOM05D004913 ORTHO05D006150 1.6e-91 340.5 284 69.0
GSVIVG01018096001 Vitis vinifera HOM05D004913 ORTHO05D006150 3.9e-90 335.9 328 61.9
CSS0025455 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D006150 2.5e-89 333.2 323 63.8
CiPaw.02G117800 Carya illinoinensis HOM05D004913 ORTHO05D006150 3.6e-88 329.3 324 61.4
MBI11_g38514_MAGBIO Magnolia biondii HOM05D004913 ORTHO05D006150 6.2e-88 328.6 323 62.2
Potri.008G160800 Populus trichocarpa HOM05D004913 ORTHO05D006150 4.0e-87 325.9 326 63.8
CsaV3_3G012680 Cucumis sativus L. HOM05D004913 ORTHO05D006150 4.4e-86 322.4 330 63.0
MELO3C006479.2 Cucumis melo HOM05D004913 ORTHO05D006150 3.7e-85 319.3 289 69.6
Nn1g02556 Nelumbo nucifera HOM05D004913 ORTHO05D006150 2.4e-84 316.6 286 66.8
FvH4_3g24470 Fragaria vesca HOM05D004913 ORTHO05D006150 3.5e-83 312.8 330 61.8
Oeu032612.1 Olea europaea HOM05D004913 ORTHO05D006150 7.8e-83 311.6 322 59.3
RcHm_v2.0_Chr5g0043971 Rosa chinensis HOM05D004913 ORTHO05D006150 1.0e-82 311.2 325 60.3
Prupe.1G027200 Prunus persica HOM05D004913 ORTHO05D006150 8.6e-82 308.1 299 64.2
Duzib151G0562 Durio zibethinus HOM05D004913 ORTHO05D006150 2.5e-81 306.6 324 58.0
MSTRG.21888 Avicennia marina HOM05D004913 ORTHO05D006150 2.1e-80 303.5 328 61.3
CSS0009777 Camellia sinensis var. sinensis HOM05D004913 ORTHO05D003182 2.8e-80 303.1 271 66.1
CANSAT78G1520 Cannabis sativa HOM05D004913 ORTHO05D006150 3.6e-80 302.8 354 54.8
Cpa.g.sc58.23 Carica papaya HOM05D004913 ORTHO05D006150 8.1e-80 301.6 327 59.0
PGR004G2231 Punica granatum HOM05D004913 ORTHO05D006150 1.8e-79 300.4 336 57.4
Sed0027984 Sechium edule HOM05D004913 ORTHO05D006150 2.4e-79 300.1 329 57.8
MD13G1204100 Malus domestica HOM05D004913 ORTHO05D006150 5.2e-79 298.9 345 55.4
QL06p015098 Quercus lobata HOM05D004913 ORTHO05D006150 8.9e-79 298.1 284 62.7
Eucgr.H03172 Eucalyptus grandis HOM05D004913 ORTHO05D006150 1.3e-77 294.3 323 58.2
Gohir.D10G152000 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.3e-77 294.3 286 63.6
Ciclev10005381m.g Citrus clementina HOM05D004913 ORTHO05D006150 1.7e-77 293.9 331 57.1
PSO210G5612 Papaver somniferum HOM05D004913 ORTHO05D006150 1.7e-77 293.9 293 64.2
Manes.15G035800 Manihot esculenta HOM05D004913 ORTHO05D006150 2.2e-77 293.5 282 61.0
Rhsim02G0032600 Rhododendron simsii HOM05D004913 ORTHO05D006150 2.9e-77 293.1 284 63.0
FAN11G1852 Fragaria x ananassa HOM05D004913 ORTHO05D006150 3.8e-77 292.7 330 59.4
Migut.N00232 Erythranthe guttata HOM05D004913 ORTHO05D006150 1.4e-76 290.8 330 61.8
Lj5g0012164 Lotus japonicus HOM05D004913 ORTHO05D006150 1.9e-76 290.4 274 63.1
MD16G1206200 Malus domestica HOM05D004913 ORTHO05D006150 4.2e-76 289.3 336 55.1
PSO832G0934 Papaver somniferum HOM05D004913 ORTHO05D006150 7.1e-76 288.5 331 59.5
Sed0018032 Sechium edule HOM05D004913 ORTHO05D003182 1.2e-75 287.7 326 57.1
Sabra08G0122700 Salix brachista HOM05D004913 ORTHO05D006150 2.1e-75 287.0 293 59.7
Gorai.011G170500 Gossypium raimondii HOM05D004913 ORTHO05D006150 2.7e-75 286.6 295 61.0
Gohir.A10G114500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 7.8e-75 285.0 293 61.1
VMungo0720G1087 Vigna mungo HOM05D004913 ORTHO05D006150 5.1e-74 282.3 272 62.1
ATR0665G449 Amborella trichopoda HOM05D004913 ORTHO05D006150 1.9e-73 280.4 286 60.8
arahy.Tifrunner.gnm1.ann1.8JLR9N Arachis hypogaea HOM05D004913 ORTHO05D006150 1.9e-73 280.4 274 62.8
TWI09G0491 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 1.9e-73 280.4 286 61.9
Potri.010G078500 Populus trichocarpa HOM05D004913 ORTHO05D006150 5.6e-73 278.9 277 60.3
Phvul.003G138434 Phaseolus vulgaris HOM05D004913 ORTHO05D006150 1.6e-72 277.3 274 62.0
Haze_11271 Corylus avellana HOM05D004913 ORTHO05D006150 8.1e-72 275.0 285 61.4
Dinv44614 Davidia involucrata HOM05D004913 ORTHO05D006150 1.8e-71 273.9 323 53.9
Gorai.006G070100 Gossypium raimondii HOM05D004913 ORTHO05D006150 1.8e-71 273.9 278 60.8
SGA_v2.0_scaffold101G29779 Striga asiatica HOM05D004913 ORTHO05D006150 1.8e-71 273.9 262 64.1
arahy.Tifrunner.gnm1.ann1.9S1KBE Arachis hypogaea HOM05D004913 ORTHO05D006150 6.9e-71 271.9 273 61.2
Gohir.D09G056500 Gossypium hirsutum HOM05D004913 ORTHO05D006150 9.0e-71 271.6 233 68.7
HanXRQChr12g0381181 Helianthus annuus HOM05D004913 ORTHO05D006150 9.9e-70 268.1 285 61.4
Gohir.A09G057300 Gossypium hirsutum HOM05D004913 ORTHO05D006150 1.3e-69 267.7 276 59.8
Manes.03G170000 Manihot esculenta HOM05D004913 ORTHO05D006150 2.9e-69 266.5 331 52.9
Lj3A719T118 Lonicera japonica HOM05D004913 ORTHO05D006150 1.1e-68 264.6 258 65.1
DCAR_030710 Daucus carota HOM05D004913 ORTHO05D006150 2.4e-68 263.5 285 61.1
Glyma.20G210600 Glycine max HOM05D004913 ORTHO05D006150 1.2e-67 261.2 235 64.7
THA.LOC104815979 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 1.6e-67 260.8 324 55.2
Psat6g114920 Pisum sativum HOM05D004913 ORTHO05D006150 3.5e-67 259.6 322 53.1
Lalb_Chr06g0168981 Lupinus albus HOM05D004913 ORTHO05D006150 4.6e-67 259.2 237 63.7
Glyma.10G179800 Glycine max HOM05D004913 ORTHO05D006150 1.0e-66 258.1 217 68.7
THA.LOC104826068 Tarenaya hassleriana HOM05D004913 ORTHO05D006150 1.1e-65 254.6 206 69.9
Lalb_Chr21g0311951 Lupinus albus HOM05D004913 ORTHO05D006150 1.9e-65 253.8 237 64.6
Sp2g08510 Schrenkiella parvula HOM05D004913 ORTHO05D006150 1.9e-65 253.8 278 56.8
EL10Ac4g07493 Beta vulgaris HOM05D004913 ORTHO05D006150 4.3e-65 252.7 271 58.7
Lsat_1_v5_gn_5_67500 Lactuca sativa HOM05D004913 ORTHO05D006150 5.6e-65 252.3 294 58.8
Ca_09877_v3 Cicer arietinum L. HOM05D004913 ORTHO05D006150 1.6e-64 250.8 207 68.6
COL.COLO4_15768 Corchorus olitorius HOM05D000979 ORTHO05D003182 6.2e-64 248.8 240 63.3
AL1G13830 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 1.4e-63 247.7 277 55.6
TWI73G0814 Tripterygium wilfordii HOM05D004913 ORTHO05D006150 2.4e-63 246.9 286 61.9
C07p26280 Brassica napus HOM05D004913 ORTHO05D006150 4.0e-63 246.1 346 49.4
AUR62040390 Chenopodium quinoa HOM05D004913 ORTHO05D006150 4.0e-63 246.1 285 57.2
AL37U10050 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 5.3e-63 245.7 274 56.6
Medtr1g076290 Medicago truncatula HOM05D004913 ORTHO05D006150 5.3e-63 245.7 230 63.9
BolC7t43157H Brassica oleracea HOM05D004913 ORTHO05D006150 2.0e-62 243.8 346 49.4
AT1G04230 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 3.4e-62 243.0 277 54.9
CDE07G0872 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 7.6e-62 241.9 273 56.8
AT5G43720 Arabidopsis thaliana HOM05D004913 ORTHO05D006150 1.3e-61 241.1 331 49.8
Carub.0001s0342 Capsella rubella HOM05D004913 ORTHO05D006150 2.9e-61 240.0 328 49.7
ECA233G3913 Erigeron canadensis HOM05D004913 ORTHO05D006150 4.9e-61 239.2 306 54.6
CARHR003560 Cardamine hirsuta HOM05D004913 ORTHO05D006150 6.4e-61 238.8 291 56.4
Carub.0008s0491 Capsella rubella HOM05D004913 ORTHO05D006150 1.4e-60 237.7 279 54.1
BolC2t10451H Brassica oleracea HOM05D004913 ORTHO05D006150 2.4e-60 236.9 327 51.4
CAN.G626.13 Capsicum annuum HOM05D004913 ORTHO05D006150 1.0e-58 231.5 324 51.9
Solyc09g083270.4 Solanum lycopersicum HOM05D004913 ORTHO05D006150 5.6e-57 225.7 286 55.6
Sopen09g032190 Solanum pennellii HOM05D004913 ORTHO05D006150 1.6e-56 224.2 286 55.2
AUR62041210 Chenopodium quinoa HOM05D004913 ORTHO05D006150 4.8e-56 222.6 326 50.3
PGSC0003DMG400006092 Solanum tuberosum HOM05D004913 ORTHO05D006150 9.0e-55 218.4 273 56.0
SEGI_31281 Sequoiadendron giganteum HOM05D004913 ORTHO05D006150 1.5e-54 217.6 247 54.7
CDE04G3353 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 4.5e-54 216.1 273 53.8
Migut.G00417 Erythranthe guttata HOM05D004913 ORTHO05D006150 2.2e-53 213.8 259 56.0
Nitab4.5_0000525g0090 Nicotiana tabacum HOM05D004913 ORTHO05D006150 4.9e-53 212.6 286 55.9
Peaxi162Scf01416g00120 Petunia axillaris HOM05D004913 ORTHO05D006150 2.5e-52 210.3 283 49.8
Nitab4.5_0004203g0050 Nicotiana tabacum HOM05D004913 ORTHO05D006150 5.5e-52 209.1 269 55.4
FAN25G2316 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.1e-51 207.2 258 52.7
FAN25G1200 Fragaria x ananassa HOM05D004913 ORTHO05D006150 2.7e-51 206.8 258 52.3
Aa31LG5G3520 Aethionema arabicum HOM05D004913 ORTHO05D006150 3.0e-50 203.4 185 62.2
BraA06t27642Z Brassica rapa HOM05D004913 ORTHO05D006150 8.7e-50 201.8 336 45.2
A06p47740 Brassica napus HOM05D004913 ORTHO05D006150 1.9e-49 200.7 336 44.3
SalBow3G1711 Salvia bowleyana HOM05D004913 ORTHO05D006150 2.5e-49 200.3 308 49.7
A02p27910 Brassica napus HOM05D004913 ORTHO05D006150 3.3e-49 199.9 326 48.5
BraA02t07829Z Brassica rapa HOM05D004913 ORTHO05D006150 3.3e-49 199.9 326 48.5
CARHR179900 Cardamine hirsuta HOM05D004913 ORTHO05D006150 1.3e-48 198.0 201 58.7
Sc13g0004930 Simmondsia chinensis HOM05D004913 ORTHO05D006150 2.1e-48 197.2 286 54.5
HPP92_014140 Vanilla planifolia HOM05D004913 ORTHO05D006150 2.8e-48 196.8 202 64.9
FAN21G0973 Fragaria x ananassa HOM05D004913 ORTHO05D006150 6.3e-48 195.7 258 51.2
TAR365G1176 Trochodendron aralioides HOM05D004913 ORTHO05D006150 8.2e-48 195.3 191 63.9
BcaC06g31682 Brassica carinata HOM05D004913 ORTHO05D006150 1.2e-46 191.4 346 43.1
FAN16G1149 Fragaria x ananassa HOM05D004913 ORTHO05D006150 3.4e-46 189.9 209 56.9
Thhalv10003245m.g Eutrema salsugineum HOM05D004913 ORTHO05D006150 4.5e-46 189.5 256 50.4
AagrBONN_evm.TU.Sc2ySwM_362.2200 Anthoceros agrestis HOM05D004913 ORTHO05D006150 2.2e-45 187.2 170 63.5
Actinidia05471 Actinidia chinensis HOM05D004913 ORTHO05D006150 3.8e-45 186.4 241 51.5
BcaC03g16589 Brassica carinata HOM05D004913 ORTHO05D006150 1.4e-44 184.5 184 59.2
C02p44080 Brassica napus HOM05D004913 ORTHO05D006150 1.4e-44 184.5 184 59.2
Os03g0797700 Oryza sativa ssp. japonica HOM05D004913 ORTHO05D006150 2.3e-42 177.2 273 50.2
Zm00001eb212900 Zea mays HOM05D004913 ORTHO05D006150 3.0e-42 176.8 273 52.4
Ah.13g071540 Amaranthus hybridus HOM05D004913 ORTHO05D006150 4.8e-40 169.5 205 57.1
CDE06G2453 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 5.9e-38 162.5 189 54.5
Pp3c2_37690 Physcomitrium patens HOM05D004913 ORTHO05D006150 5.9e-38 162.5 172 55.2
SMO358G0388 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 1.0e-37 161.8 286 42.0
unitig_0.g131 Utricularia gibba HOM05D004913 ORTHO05D006150 8.5e-37 158.7 272 47.1
Cc03_g04640 Coffea canephora HOM05D004913 ORTHO05D006150 1.4e-36 157.9 331 43.2
Mapoly0010s0154 Marchantia polymorpha HOM05D004913 ORTHO05D006150 2.5e-36 157.1 229 50.7
PSO238G0009 Papaver somniferum HOM05D004913 ORTHO05D006150 5.1e-34 149.4 252 41.3
CDE07G2030 Ceratophyllum demersum HOM05D004913 ORTHO05D006150 1.1e-33 148.3 288 41.7
SHI00581 Sapria himalayana HOM05D004913 ORTHO05D006150 2.5e-33 147.1 274 46.0
AL8G16560 Arabidopsis lyrata HOM05D004913 ORTHO05D006150 4.3e-33 146.4 150 58.0
Hund17874 Selenicereus undatus HOM05D004913 ORTHO05D006150 5.7e-33 146.0 418 32.8
PSO210G2862 Papaver somniferum HOM05D004913 ORTHO05D006150 7.4e-33 145.6 252 41.3
BcaC06g34634 Brassica carinata HOM05D004913 ORTHO05D006150 4.4e-25 119.8 132 58.3
CBR_g525 Chara braunii HOM05D004913 ORTHO05D006150 4.8e-24 116.3 134 51.5
BcaC06g34635 Brassica carinata HOM05D004913 ORTHO05D006150 3.5e-22 110.2 195 43.6
ClCG05G004680 Citrullus lanatus HOM05D000979 ORTHO05D003182 5.0e-21 106.3 327 36.1
SMO347G0406 Selaginella moellendorffii HOM05D004913 ORTHO05D006150 2.4e-15 87.4 123 44.7
Zm00001eb034960 Zea mays HOM05D004913 ORTHO05D006150 5.3e-15 86.3 81 63.0
Atru.chr4.2281 Acer truncatum HOM05D000979 ORTHO05D003182 5.9e-14 82.8 97 55.7
FAN16G0422 Fragaria x ananassa HOM05D004913 ORTHO05D006150 4.0e-10 70.1 120 50.8
MCO11G351 Micromonas commoda HOM05D004913 ORTHO05D006150 1.8e-07 61.2 129 37.2
Zm00001eb060940 Zea mays HOM05D004913 ORTHO05D006150 9.1e-07 58.9 58 67.2
Gohir.D08G197400 Gossypium hirsutum HOM05D004913 ORTHO05D006150 4.5e-06 56.6 94 46.8
Gorai.003G091900 Gossypium raimondii HOM05D004913 ORTHO05D006150 7.7e-06 55.8 94 46.8


User provided reference genes

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