Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03328 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 6.8e-155 550.8 318 100.0
Cfa015608 Carpinus fangiana HOM05D006587 ORTHO05D006035 4.0e-83 312.4 333 57.7
CSS0008441 Camellia sinensis var. sinensis HOM05D006587 ORTHO05D008487 5.3e-83 312.0 313 59.1
PGR004G2885 Punica granatum HOM05D006587 ORTHO05D008487 3.8e-81 305.8 309 57.6
GSVIVG01017920001 Vitis vinifera HOM05D006587 ORTHO05D008487 6.5e-81 305.1 363 52.3
Rhsim04G0204300 Rhododendron simsii HOM05D006587 ORTHO05D008487 3.2e-80 302.8 309 59.2
CANSAT78G1956 Cannabis sativa HOM05D006587 ORTHO05D008487 7.1e-80 301.6 362 53.9
Nitab4.5_0000144g0120 Nicotiana tabacum HOM05D006587 ORTHO05D008487 1.6e-79 300.4 361 52.6
Actinidia23494 Actinidia chinensis HOM05D006587 ORTHO05D008487 6.0e-79 298.5 306 58.5
Hma1.2p1_0511F.1_g168960 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 1.0e-78 297.7 376 52.4
Manes.03G181700 Manihot esculenta HOM05D006587 ORTHO05D008487 1.0e-78 297.7 306 58.2
TWI73G1280 Tripterygium wilfordii HOM05D006587 ORTHO05D008487 5.1e-78 295.4 309 56.0
MD13G1186800 Malus domestica HOM05D006587 ORTHO05D008487 8.7e-78 294.7 306 56.2
BcaC04g18580 Brassica carinata HOM05D006587 ORTHO05D008487 1.5e-77 293.9 307 56.7
C09p56970 Brassica napus HOM05D006587 ORTHO05D008487 1.5e-77 293.9 307 56.7
BolC9t58560H Brassica oleracea HOM05D006587 ORTHO05D008487 1.5e-77 293.9 307 56.7
Cc03_g03390 Coffea canephora HOM05D006587 ORTHO05D008487 1.9e-77 293.5 304 57.6
Prupe.1G154500 Prunus persica HOM05D006587 ORTHO05D008487 1.9e-77 293.5 348 52.9
CiPaw.02G094600 Carya illinoinensis HOM05D006587 ORTHO05D008487 3.3e-77 292.7 362 53.3
MELO3C006549.2 Cucumis melo HOM05D006587 ORTHO05D008487 3.3e-77 292.7 350 53.7
Duzib151G0305 Durio zibethinus HOM05D006587 ORTHO05D008487 3.3e-77 292.7 258 62.0
BcaB08g36587 Brassica carinata HOM05D006587 ORTHO05D008487 7.4e-77 291.6 299 56.9
Potri.008G149800 Populus trichocarpa HOM05D006587 ORTHO05D008487 7.4e-77 291.6 310 55.8
ClCG05G005300 Citrullus lanatus HOM05D006587 ORTHO05D008487 9.7e-77 291.2 361 53.2
TAR362G0294 Trochodendron aralioides HOM05D006587 ORTHO05D008487 9.7e-77 291.2 368 53.0
Thhalv10013731m.g Eutrema salsugineum HOM05D006587 ORTHO05D008487 1.3e-76 290.8 303 57.1
Sed0010167 Sechium edule HOM05D006587 ORTHO05D008487 1.6e-76 290.4 337 55.5
CsaV3_3G013530 Cucumis sativus L. HOM05D006587 ORTHO05D008487 2.8e-76 289.7 363 53.2
Eucgr.H03560 Eucalyptus grandis HOM05D006587 ORTHO05D008487 3.7e-76 289.3 304 55.6
Solyc01g079710.3 Solanum lycopersicum HOM05D006587 ORTHO05D008487 3.7e-76 289.3 361 50.7
BraA10t44108Z Brassica rapa HOM05D006587 ORTHO05D008487 4.8e-76 288.9 304 56.6
Nitab4.5_0000180g0030 Nicotiana tabacum HOM05D006587 ORTHO05D008487 8.2e-76 288.1 320 56.6
AT5G19300 Arabidopsis thaliana HOM05D006587 ORTHO05D008487 1.1e-75 287.7 326 54.3
Sopen01g031480 Solanum pennellii HOM05D006587 ORTHO05D008487 1.1e-75 287.7 361 50.1
ECA236G2554 Erigeron canadensis HOM05D006587 ORTHO05D008487 1.4e-75 287.3 303 55.8
A10p20380 Brassica napus HOM05D006587 ORTHO05D008487 1.8e-75 287.0 304 55.9
Glyma.20G143100 Glycine max HOM05D006587 ORTHO05D008487 1.8e-75 287.0 358 52.8
Sc19g0004360 Simmondsia chinensis HOM05D006587 ORTHO05D008487 1.8e-75 287.0 364 51.9
AL6G30780 Arabidopsis lyrata HOM05D006587 ORTHO05D008487 2.4e-75 286.6 303 56.1
VMungo0720G0184 Vigna mungo HOM05D006587 ORTHO05D008487 3.1e-75 286.2 358 54.2
Carub.0006s1763 Capsella rubella HOM05D006587 ORTHO05D008487 4.1e-75 285.8 303 55.8
RcHm_v2.0_Chr4g0417131 Rosa chinensis HOM05D006587 ORTHO05D008487 4.1e-75 285.8 348 53.2
CARHR193670 Cardamine hirsuta HOM05D006587 ORTHO05D008487 5.3e-75 285.4 302 56.6
Haze_00934 Corylus avellana HOM05D006587 ORTHO05D008487 5.3e-75 285.4 331 55.9
MD16G1187700 Malus domestica HOM05D006587 ORTHO05D008487 5.3e-75 285.4 360 50.3
Sp6g25120 Schrenkiella parvula HOM05D006587 ORTHO05D008487 9.0e-75 284.6 303 55.4
Ciclev10005176m.g Citrus clementina HOM05D006587 ORTHO05D008487 1.2e-74 284.3 368 51.4
PSO170G4636 Papaver somniferum HOM05D006587 ORTHO05D008487 1.2e-74 284.3 357 53.5
CAN.G69.11 Capsicum annuum HOM05D006587 ORTHO05D008487 1.5e-74 283.9 363 50.7
FAN07G2036 Fragaria x ananassa HOM05D006587 ORTHO05D008487 1.5e-74 283.9 356 50.8
TAR633G1367 Trochodendron aralioides HOM05D006587 ORTHO05D008487 2.0e-74 283.5 355 53.5
Aa31LG11G10390 Aethionema arabicum HOM05D006587 ORTHO05D008487 2.6e-74 283.1 306 55.2
Gorai.002G024100 Gossypium raimondii HOM05D006587 ORTHO05D008487 3.4e-74 282.7 341 51.9
Atru.chr4.2522 Acer truncatum HOM05D006587 ORTHO05D008487 4.5e-74 282.3 365 51.8
Peaxi162Scf01336g00122 Petunia axillaris HOM05D006587 ORTHO05D008487 4.5e-74 282.3 346 53.2
FAN17G1856 Fragaria x ananassa HOM05D000104 ORTHO05D006391 5.9e-74 282.0 355 50.4
Lj5g0006939 Lotus japonicus HOM05D006587 ORTHO05D008487 5.9e-74 282.0 347 53.9
Thecc.04G226500 Theobroma cacao HOM05D006587 ORTHO05D008487 5.9e-74 282.0 308 54.2
Gohir.D01G021600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 1.3e-73 280.8 341 51.3
TPR.G5533 Trifolium pratense HOM05D006587 ORTHO05D008487 1.7e-73 280.4 347 53.0
MSTRG.24750 Avicennia marina HOM05D006587 ORTHO05D008487 2.9e-73 279.6 350 50.6
PSO302G0285 Papaver somniferum HOM05D006587 ORTHO05D008487 2.9e-73 279.6 357 52.9
Phvul.007G053900 Phaseolus vulgaris HOM05D006587 ORTHO05D008487 2.9e-73 279.6 308 54.5
Actinidia40165 Actinidia chinensis HOM05D006587 ORTHO05D008487 3.8e-73 279.3 368 54.1
Gohir.A01G023600 Gossypium hirsutum HOM05D006587 ORTHO05D008487 3.8e-73 279.3 341 51.0
Ah.13g074000 Amaranthus hybridus HOM05D006587 ORTHO05D008487 6.5e-73 278.5 308 52.6
arahy.Tifrunner.gnm1.ann1.G9UJER Arachis hypogaea HOM05D006587 ORTHO05D008487 6.5e-73 278.5 305 56.1
THA.LOC104818820 Tarenaya hassleriana HOM05D006587 ORTHO05D008487 1.1e-72 277.7 307 53.7
arahy.Tifrunner.gnm1.ann1.HZWC9V Arachis hypogaea HOM05D006587 ORTHO05D008487 1.4e-72 277.3 305 55.7
Migut.N00169 Erythranthe guttata HOM05D006587 ORTHO05D008487 1.4e-72 277.3 307 54.1
FAN12G2172 Fragaria x ananassa HOM05D006587 ORTHO05D006391 1.4e-72 277.3 343 51.3
HanXRQChr13g0400281 Helianthus annuus HOM05D006587 ORTHO05D008487 1.9e-72 276.9 299 54.2
Lsat_1_v5_gn_9_80941 Lactuca sativa HOM05D006587 ORTHO05D008487 1.9e-72 276.9 298 56.4
PGSC0003DMG400008999 Solanum tuberosum HOM05D006587 ORTHO05D008487 4.2e-72 275.8 395 46.6
Medtr1g105065 Medicago truncatula HOM05D006587 ORTHO05D008487 5.5e-72 275.4 358 49.7
Lalb_Chr06g0164781 Lupinus albus HOM05D006587 ORTHO05D008487 1.2e-71 274.2 343 53.9
Ca_10966_v3 Cicer arietinum L. HOM05D006587 ORTHO05D008487 3.6e-71 272.7 303 54.1
DCAR_002398 Daucus carota HOM05D006587 ORTHO05D008487 7.9e-71 271.6 307 53.7
SalBow5G0644 Salvia bowleyana HOM05D006587 ORTHO05D008487 1.8e-70 270.4 359 50.7
Potri.010G091400 Populus trichocarpa HOM05D006587 ORTHO05D008487 3.0e-70 269.6 361 55.7
Aqoxy2G03329 Aquilegia oxysepala HOM05D006587 ORTHO05D008487 2.5e-69 266.5 307 53.1
MBI17_g12493_MAGBIO Magnolia biondii HOM05D006587 ORTHO05D008487 7.4e-69 265.0 283 53.7
Lj3A741G38 Lonicera japonica HOM05D006587 ORTHO05D008487 1.3e-68 264.2 276 55.1
Sabra08G0113900 Salix brachista HOM05D006587 ORTHO05D008487 1.3e-68 264.2 288 55.9
Psat6g209880 Pisum sativum HOM05D006587 ORTHO05D008487 1.1e-67 261.2 359 49.0
Os04g0244500 Oryza sativa ssp. japonica HOM05D006587 ORTHO05D008487 1.4e-67 260.8 301 53.5
HPP92_010726 Vanilla planifolia HOM05D006587 ORTHO05D008487 1.2e-66 257.7 304 52.3
FAN22G2243 Fragaria x ananassa HOM05D000104 ORTHO05D006391 7.7e-66 255.0 287 53.7
EL10As3g23313 Beta vulgaris HOM05D006587 ORTHO05D008487 1.4e-64 250.8 364 48.4
SalBow5G2730 Salvia bowleyana HOM05D006587 ORTHO05D008487 1.8e-62 243.8 339 49.6
SGA_v2.0_scaffold10G05110 Striga asiatica HOM05D006587 ORTHO05D008487 2.3e-62 243.4 353 47.6
Hma1.2p1_0511F.1_g168950 Hydrangea macrophylla HOM05D006587 ORTHO05D008487 5.1e-62 242.3 286 50.3
Dinv44504 Davidia involucrata HOM05D006587 ORTHO05D008487 2.6e-58 229.9 242 55.0
Dinv38415 Davidia involucrata HOM05D006587 ORTHO05D008487 1.0e-57 228.0 289 54.7
SMO364G0578 Selaginella moellendorffii HOM05D006587 ORTHO05D008487 1.0e-57 228.0 303 47.2
AUR62043415 Chenopodium quinoa HOM05D006587 ORTHO05D008487 2.6e-53 213.4 264 50.0
Mapoly0049s0075 Marchantia polymorpha HOM05D006587 ORTHO05D008487 4.4e-53 212.6 302 42.7
Oeu040660.1 Olea europaea HOM05D006587 ORTHO05D008487 1.7e-52 210.7 145 75.2
QL06p003535 Quercus lobata HOM05D006587 ORTHO05D008487 3.7e-52 209.5 145 74.5
Cpa.g.sc147.29 Carica papaya HOM05D006587 ORTHO05D008487 5.3e-51 205.7 204 57.8
Pp3c7_20660 Physcomitrium patens HOM05D006587 ORTHO05D008487 3.5e-50 203.0 354 40.7
FvH4_4g14960 Fragaria vesca HOM05D006587 ORTHO05D008487 1.0e-49 201.4 144 70.1
ATR0626G244 Amborella trichopoda HOM05D006587 ORTHO05D008487 1.9e-48 197.2 256 48.8
CDE05G0907 Ceratophyllum demersum HOM05D006587 ORTHO05D008487 2.5e-48 196.8 146 68.5
PRCOL_00002662 Prasinoderma coloniale HOM05D006587 ORTHO05D008487 4.0e-46 189.5 324 41.0
Glyma.10G250600 Glycine max HOM05D006587 ORTHO05D008487 1.2e-42 177.9 126 71.4
Zm00001eb373340 Zea mays HOM05D006587 ORTHO05D008487 2.7e-42 176.8 169 58.6
Sabra10G0051900 Salix brachista HOM05D006587 ORTHO05D008487 3.2e-40 169.9 300 39.0
unitig_899.g15640 Utricularia gibba HOM05D006587 ORTHO05D008487 7.2e-40 168.7 300 42.3
AagrBONN_evm.TU.Sc2ySwM_340.504 Anthoceros agrestis HOM05D006587 ORTHO05D008487 1.8e-38 164.1 141 61.0
AUR62038173 Chenopodium quinoa HOM05D006587 ORTHO05D008487 5.7e-29 132.5 281 38.1
QL06p003531 Quercus lobata HOM05D006587 ORTHO05D008487 1.8e-27 127.5 71 87.3
CSS0044999 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 1.2e-26 124.8 146 50.7
CSS0022730 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D006391 2.5e-24 117.1 212 43.9
COL.COLO4_06205 Corchorus olitorius HOM05D006587 ORTHO05D008487 1.2e-23 114.8 145 47.6
Cre16.g670617 Chlamydomonas reinhardtii HOM05D006587 ORTHO05D008487 1.5e-21 107.8 341 28.4
Cfa024389 Carpinus fangiana HOM05D006587 ORTHO05D008487 1.9e-19 100.9 403 26.8
Lalb_Chr02g0144651 Lupinus albus HOM05D006587 ORTHO05D008487 1.2e-13 81.6 57 66.7
Lsat_1_v5_gn_9_31900 Lactuca sativa HOM05D006587 ORTHO05D011576 2.2e-12 77.4 49 69.4
SEGI_15408 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 3.2e-11 73.6 45 68.9
TAR362G0446 Trochodendron aralioides HOM05D006587 ORTHO05D008487 3.2e-11 73.6 45 84.4
Lalb_Chr02g0144661 Lupinus albus HOM05D006587 ORTHO05D008487 7.0e-11 72.4 161 39.1
PSO151G0052 Papaver somniferum HOM05D004736 ORTHO05D030424 2.7e-10 70.5 73 47.9
SEGI_20820 Sequoiadendron giganteum HOM05D006587 ORTHO05D008487 3.3e-08 63.5 39 87.2
Gorai.004G106600 Gossypium raimondii HOM05D006587 ORTHO05D008487 2.1e-07 60.8 68 54.4


User provided reference genes

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