Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G03309 Aquilegia oxysepala HOM05D005183 ORTHO05D006684 2.9e-174 615.1 316 100.0
Nn4g24833 Nelumbo nucifera HOM05D005183 ORTHO05D006684 1.3e-145 520.0 316 81.0
Nn2g14627 Nelumbo nucifera HOM05D005183 ORTHO05D006684 1.1e-144 516.9 316 80.7
TAR371G0749 Trochodendron aralioides HOM05D005183 ORTHO05D006684 2.0e-143 512.7 317 80.8
GSVIVG01033782001 Vitis vinifera HOM05D005183 ORTHO05D006684 5.0e-142 508.1 316 77.2
Dinv19828 Davidia involucrata HOM05D005183 ORTHO05D006684 1.8e-139 499.6 314 78.0
Gorai.002G242600 Gossypium raimondii HOM05D005183 ORTHO05D006684 2.0e-138 496.1 316 75.9
Gohir.A01G209300 Gossypium hirsutum HOM05D005183 ORTHO05D006684 3.4e-138 495.4 316 75.9
Eucgr.A01543 Eucalyptus grandis HOM05D005183 ORTHO05D006684 1.3e-137 493.4 311 76.2
Gohir.D01G198400 Gossypium hirsutum HOM05D005183 ORTHO05D006684 1.7e-137 493.0 316 75.3
Hma1.2p1_0611F.1_g188660 Hydrangea macrophylla HOM05D005183 ORTHO05D006684 4.8e-137 491.5 314 77.4
Thecc.05G081000 Theobroma cacao HOM05D005183 ORTHO05D006684 6.3e-137 491.1 316 76.3
COL.COLO4_29815 Corchorus olitorius HOM05D005183 ORTHO05D006684 2.4e-136 489.2 316 76.3
Sc20g0006050 Simmondsia chinensis HOM05D005183 ORTHO05D006684 3.1e-136 488.8 315 77.1
Sopen10g033080 Solanum pennellii HOM05D005183 ORTHO05D006684 3.1e-136 488.8 318 77.0
PGSC0003DMG400028174 Solanum tuberosum HOM05D005183 ORTHO05D006684 3.1e-136 488.8 318 77.0
CSS0041546 Camellia sinensis var. sinensis HOM05D005183 ORTHO05D006684 7.0e-136 487.6 314 77.4
PGR004G1465 Punica granatum HOM05D005183 ORTHO05D006684 1.2e-135 486.9 316 74.4
Solyc10g083600.2 Solanum lycopersicum HOM05D005183 ORTHO05D006684 1.2e-135 486.9 318 76.7
Ca_06436_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 1.6e-135 486.5 314 75.5
Oeu040539.1 Olea europaea HOM05D005183 ORTHO05D006684 2.0e-135 486.1 316 75.9
Manes.08G020900 Manihot esculenta HOM05D005183 ORTHO05D006684 3.5e-135 485.3 316 75.9
QL07p040540 Quercus lobata HOM05D005183 ORTHO05D006684 3.5e-135 485.3 314 75.2
Nitab4.5_0002715g0140 Nicotiana tabacum HOM05D005183 ORTHO05D006684 4.5e-135 485.0 314 76.1
Peaxi162Scf00110g02022 Petunia axillaris HOM05D005183 ORTHO05D006684 4.5e-135 485.0 316 75.6
Duzib128G1222 Durio zibethinus HOM05D005183 ORTHO05D006684 7.7e-135 484.2 316 75.3
Ciclev10028864m.g Citrus clementina HOM05D005183 ORTHO05D006684 1.0e-134 483.8 314 75.2
CiPaw.09G008700 Carya illinoinensis HOM05D005183 ORTHO05D006684 1.7e-134 483.0 311 74.6
ClCG10G019350 Citrullus lanatus HOM05D005183 ORTHO05D006684 2.2e-134 482.6 315 74.6
Glyma.13G151300 Glycine max HOM05D005183 ORTHO05D006684 2.9e-134 482.3 314 75.2
MELO3C018272.2 Cucumis melo HOM05D005183 ORTHO05D006684 5.0e-134 481.5 315 74.3
Glyma.10G066200 Glycine max HOM05D005183 ORTHO05D006684 6.5e-134 481.1 314 75.2
Lalb_Chr06g0173361 Lupinus albus HOM05D005183 ORTHO05D006684 8.5e-134 480.7 314 75.8
CAN.G1138.15 Capsicum annuum HOM05D005183 ORTHO05D006684 1.1e-133 480.3 319 75.2
PSO478G0399 Papaver somniferum HOM05D005183 ORTHO05D006684 1.5e-133 479.9 317 76.3
Psat6g078200 Pisum sativum HOM05D005183 ORTHO05D006684 1.5e-133 479.9 314 74.2
Actinidia10400 Actinidia chinensis HOM05D005183 ORTHO05D006684 2.5e-133 479.2 314 74.5
PSO017G1745 Papaver somniferum HOM05D005183 ORTHO05D006684 5.5e-133 478.0 317 76.3
Hund27408 Selenicereus undatus HOM05D005183 ORTHO05D006684 5.5e-133 478.0 311 75.2
Cc09_g05380 Coffea canephora HOM05D005183 ORTHO05D006684 9.4e-133 477.2 316 73.7
Sed0001030 Sechium edule HOM05D005183 ORTHO05D006684 9.4e-133 477.2 298 76.8
Phvul.007G223300 Phaseolus vulgaris HOM05D005183 ORTHO05D006684 1.6e-132 476.5 314 74.5
CsaV3_3G036840 Cucumis sativus L. HOM05D005183 ORTHO05D006684 2.1e-132 476.1 313 73.8
DCAR_029401 Daucus carota HOM05D005183 ORTHO05D006684 2.7e-132 475.7 311 74.6
Oeu013577.1 Olea europaea HOM05D005183 ORTHO05D006684 3.6e-132 475.3 316 73.4
Cfa016373 Carpinus fangiana HOM05D005183 ORTHO05D006684 4.7e-132 474.9 314 74.2
DCAR_010653 Daucus carota HOM05D005183 ORTHO05D006684 6.1e-132 474.6 311 74.3
Potri.015G088700 Populus trichocarpa HOM05D005183 ORTHO05D006684 6.1e-132 474.6 314 73.6
VMungo0720G1906 Vigna mungo HOM05D005183 ORTHO05D006684 8.0e-132 474.2 315 74.6
Ah.09g233440 Amaranthus hybridus HOM05D005183 ORTHO05D006684 1.0e-131 473.8 309 73.5
EL10Ac1g00750 Beta vulgaris HOM05D005183 ORTHO05D006684 1.0e-131 473.8 311 74.3
THA.LOC104808666 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 1.8e-131 473.0 316 73.1
Hund17099 Selenicereus undatus HOM05D005183 ORTHO05D006684 5.2e-131 471.5 311 76.5
vmacro17863 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 5.2e-131 471.5 341 70.7
HanXRQChr02g0051911 Helianthus annuus HOM05D005183 ORTHO05D006684 8.8e-131 470.7 311 74.9
AUR62023398 Chenopodium quinoa HOM05D005183 ORTHO05D006684 2.0e-130 469.5 312 73.4
SGA_v2.0_scaffold75G24795 Striga asiatica HOM05D005183 ORTHO05D006684 2.0e-130 469.5 316 73.4
TPR.G28986 Trifolium pratense HOM05D005183 ORTHO05D006684 2.0e-130 469.5 314 73.6
Cfa008157 Carpinus fangiana HOM05D005183 ORTHO05D006684 2.6e-130 469.2 314 73.9
AUR62013753 Chenopodium quinoa HOM05D005183 ORTHO05D006684 2.6e-130 469.2 312 73.1
MSTRG.5807 Avicennia marina HOM05D005183 ORTHO05D006684 4.4e-130 468.4 308 74.0
Haze_00122 Corylus avellana HOM05D005183 ORTHO05D006684 9.8e-130 467.2 341 68.9
SGA_v2.0_scaffold40G15402 Striga asiatica HOM05D005183 ORTHO05D006684 1.7e-129 466.5 316 72.8
Cpa.g.sc111.25 Carica papaya HOM05D005183 ORTHO05D006684 2.8e-129 465.7 311 74.0
TWI74G1514 Tripterygium wilfordii HOM05D005183 ORTHO05D006684 6.3e-129 464.5 313 73.8
Aa31LG8G10050 Aethionema arabicum HOM05D005183 ORTHO05D006684 8.3e-129 464.2 311 72.7
Lsat_1_v5_gn_4_35140 Lactuca sativa HOM05D005183 ORTHO05D006684 8.3e-129 464.2 293 76.5
Lj5g0003294 Lotus japonicus HOM05D005183 ORTHO05D006684 8.3e-129 464.2 311 73.3
Nitab4.5_0005311g0010 Nicotiana tabacum HOM05D005183 ORTHO05D006684 8.3e-129 464.2 294 76.9
CDE08G0191 Ceratophyllum demersum HOM05D005183 ORTHO05D006684 9.1e-128 460.7 306 72.2
Migut.J00983 Erythranthe guttata HOM05D005183 ORTHO05D006684 2.0e-127 459.5 313 71.9
Os01g0513800 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 3.5e-127 458.8 313 74.4
HanXRQChr17g0545251 Helianthus annuus HOM05D005183 ORTHO05D006684 1.0e-126 457.2 301 75.4
BcaC06g35547 Brassica carinata HOM05D005183 ORTHO05D006684 1.3e-126 456.8 312 71.5
BolC7t41857H Brassica oleracea HOM05D005183 ORTHO05D006684 1.3e-126 456.8 312 71.5
A07p08780 Brassica napus HOM05D005183 ORTHO05D006684 3.8e-126 455.3 312 71.2
C07p13620 Brassica napus HOM05D005183 ORTHO05D006684 3.8e-126 455.3 312 71.2
Thhalv10021169m.g Eutrema salsugineum HOM05D005183 ORTHO05D006684 3.8e-126 455.3 311 70.4
ATR0559G171 Amborella trichopoda HOM05D005183 ORTHO05D006684 5.0e-126 454.9 313 73.2
BcaB06g26517 Brassica carinata HOM05D005183 ORTHO05D006684 5.0e-126 454.9 312 70.5
Migut.N00918 Erythranthe guttata HOM05D005183 ORTHO05D006684 5.0e-126 454.9 313 71.2
Zm00001eb255650 Zea mays HOM05D005183 ORTHO05D006684 5.0e-126 454.9 313 72.5
BraA07t28669Z Brassica rapa HOM05D005183 ORTHO05D006684 8.6e-126 454.1 312 70.8
unitig_0.g1556 Utricularia gibba HOM05D005183 ORTHO05D006684 1.9e-125 453.0 316 69.9
Zm00001eb292270 Zea mays HOM05D005183 ORTHO05D006684 3.3e-125 452.2 313 72.2
AL3G38300 Arabidopsis lyrata HOM05D005183 ORTHO05D006684 9.5e-125 450.7 316 70.9
Carub.0003s2385 Capsella rubella HOM05D005183 ORTHO05D006684 9.5e-125 450.7 325 68.3
Medtr1g061160 Medicago truncatula HOM05D005183 ORTHO05D006684 9.5e-125 450.7 315 72.1
AT3G23620 Arabidopsis thaliana HOM05D005183 ORTHO05D006684 1.2e-124 450.3 316 70.3
BcaB04g20435 Brassica carinata HOM05D005183 ORTHO05D006684 2.8e-124 449.1 316 69.3
ECA233G2114 Erigeron canadensis HOM05D005183 ORTHO05D006684 1.0e-123 447.2 286 75.5
Lj3A998T32 Lonicera japonica HOM05D005183 ORTHO05D006684 1.8e-123 446.4 312 71.8
FvH4_6g17900 Fragaria vesca HOM05D005183 ORTHO05D006684 5.2e-123 444.9 329 68.4
FAN02G4090 Fragaria x ananassa HOM05D005183 ORTHO05D006684 5.2e-123 444.9 329 68.4
FAN14G3711 Fragaria x ananassa HOM05D005183 ORTHO05D006684 5.2e-123 444.9 329 68.4
BolC1t03963H Brassica oleracea HOM05D005183 ORTHO05D006684 1.5e-122 443.4 298 71.5
Sabra15G0111600 Salix brachista HOM05D005183 ORTHO05D006684 1.5e-122 443.4 314 69.1
A01p31440 Brassica napus HOM05D005183 ORTHO05D006684 2.6e-122 442.6 298 71.1
BraA01t03270Z Brassica rapa HOM05D005183 ORTHO05D006684 2.6e-122 442.6 298 71.1
C01p40070 Brassica napus HOM05D005183 ORTHO05D006684 3.4e-122 442.2 298 71.1
CARHR099550 Cardamine hirsuta HOM05D005183 ORTHO05D006684 3.4e-122 442.2 318 69.5
RcHm_v2.0_Chr3g0472151 Rosa chinensis HOM05D005183 ORTHO05D006684 3.4e-122 442.2 329 69.3
Sp3g21310 Schrenkiella parvula HOM05D005183 ORTHO05D006684 3.4e-122 442.2 316 68.0
SEGI_13997 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 5.7e-122 441.4 311 71.4
FAN05G1411 Fragaria x ananassa HOM05D005183 ORTHO05D006684 7.5e-122 441.0 329 67.5
Prupe.7G117100 Prunus persica HOM05D005183 ORTHO05D006684 7.5e-122 441.0 318 69.5
MD12G1018000 Malus domestica HOM05D005183 ORTHO05D006684 1.3e-121 440.3 317 69.7
HPP92_026689 Vanilla planifolia HOM05D005183 ORTHO05D006684 1.3e-121 440.3 315 67.9
SEGI_31815 Sequoiadendron giganteum HOM05D005183 ORTHO05D006684 4.9e-121 438.3 311 71.1
vmacro00782 Vaccinium macrocarpon HOM05D005183 ORTHO05D006684 8.3e-121 437.6 314 70.7
TPR.G5686 Trifolium pratense HOM05D005183 ORTHO05D006684 1.8e-120 436.4 288 72.9
FAN09G1214 Fragaria x ananassa HOM05D005183 ORTHO05D006684 3.2e-120 435.6 339 66.4
HPP92_017999 Vanilla planifolia HOM05D005183 ORTHO05D006684 8.6e-118 427.6 291 70.1
Atru.chr8.1634 Acer truncatum HOM05D005183 ORTHO05D006684 8.9e-115 417.5 269 73.6
MD14G1016000 Malus domestica HOM05D005183 ORTHO05D006684 2.6e-114 416.0 298 69.5
THA.LOC104804771 Tarenaya hassleriana HOM05D005183 ORTHO05D006684 2.6e-114 416.0 257 76.3
Gohir.A01G215950 Gossypium hirsutum HOM05D005183 ORTHO05D006684 8.6e-110 401.0 329 63.2
FAN05G2784 Fragaria x ananassa HOM05D005183 ORTHO05D006684 9.5e-109 397.5 253 74.7
Rhsim11G0063800 Rhododendron simsii HOM05D005183 ORTHO05D006684 2.5e-101 372.9 314 62.7
Pp3c4_19370 Physcomitrium patens HOM05D005183 ORTHO05D006684 7.6e-98 361.3 311 58.2
Actinidia31290 Actinidia chinensis HOM05D005183 ORTHO05D006684 2.9e-97 359.4 314 60.8
Mapoly0098s0050 Marchantia polymorpha HOM05D005183 ORTHO05D006684 2.7e-95 352.8 299 58.2
Nitab4.5_0000132g0170 Nicotiana tabacum HOM05D005183 ORTHO05D006684 5.1e-94 348.6 225 76.0
Lalb_Chr02g0155161 Lupinus albus HOM05D005183 ORTHO05D006684 1.6e-92 343.6 234 72.2
SMO367G0957 Selaginella moellendorffii HOM05D005183 ORTHO05D006684 6.2e-92 341.7 320 54.7
Ca_28565_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 8.9e-91 337.8 223 74.4
Pp3c26_6490 Physcomitrium patens HOM05D005183 ORTHO05D006684 2.3e-86 323.2 306 52.9
AagrBONN_evm.TU.Sc2ySwM_344.5577 Anthoceros agrestis HOM05D005183 ORTHO05D006684 3.9e-86 322.4 307 54.1
Haze_19538 Corylus avellana HOM05D005183 ORTHO05D006684 8.1e-84 314.7 276 60.5
CBR_g32692 Chara braunii HOM05D012618 ORTHO05D006684 1.3e-78 297.4 288 53.5
Cre03.g197000 Chlamydomonas reinhardtii HOM05D005183 ORTHO05D006684 9.9e-74 281.2 303 49.2
MCO10G188 Micromonas commoda HOM05D005183 ORTHO05D006684 2.4e-67 260.0 294 47.3
Oeu037537.3 Olea europaea HOM05D005183 ORTHO05D006684 1.2e-66 257.7 214 62.6
PRCOL_00004600 Prasinoderma coloniale HOM05D005183 ORTHO05D006684 1.1e-53 214.5 300 40.3
HanXRQChr08g0223931 Helianthus annuus HOM05D005183 ORTHO05D006684 1.1e-45 188.0 183 56.8
Ca_11626_v3 Cicer arietinum L. HOM05D005183 ORTHO05D006684 7.2e-40 168.7 104 76.0
Os05g0506900 Oryza sativa ssp. japonica HOM05D005183 ORTHO05D006684 3.6e-31 139.8 94 72.3
Lalb_Chr02g0155171 Lupinus albus HOM05D005183 ORTHO05D006684 4.7e-31 139.4 93 72.0
MSTRG.19230 Avicennia marina HOM05D005183 ORTHO05D026969 6.3e-28 129.0 90 70.0
TAR371G0095 Trochodendron aralioides HOM05D005183 ORTHO05D045124 1.0e-25 121.7 116 60.3
MELO3C028534.2 Cucumis melo HOM05D005183 ORTHO05D006684 2.1e-23 114.0 79 68.4
C04p39730 Brassica napus HOM05D005183 ORTHO05D026969 1.7e-20 104.4 90 62.2
BolC4t25545H Brassica oleracea HOM05D005183 ORTHO05D026969 1.7e-20 104.4 90 62.2
BolC6t35803H Brassica oleracea HOM05D005183 ORTHO05D026969 7.2e-16 89.0 90 53.3
Dinv21257 Davidia involucrata HOM05D005183 ORTHO05D045124 7.0e-11 72.4 99 49.5


User provided reference genes

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