Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 2.4e-130 469.5 385 100.0
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 1.5e-111 407.1 389 83.5
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 2.1e-110 403.3 385 83.6
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 8.0e-110 401.4 222 90.1
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 2.3e-109 399.8 222 89.2
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 6.8e-109 398.3 383 85.4
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 4.4e-108 395.6 225 87.1
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 7.5e-108 394.8 389 80.7
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 1.3e-107 394.0 222 84.7
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 2.9e-107 392.9 222 86.9
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 2.9e-107 392.9 222 84.2
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 8.3e-107 391.3 384 79.7
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 1.4e-106 390.6 223 85.2
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 1.4e-106 390.6 222 86.5
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 1.4e-106 390.6 222 85.6
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 1.8e-106 390.2 222 84.7
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 2.4e-106 389.8 222 86.9
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 2.4e-106 389.8 222 83.8
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 3.2e-106 389.4 383 80.2
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 4.1e-106 389.0 385 80.0
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 5.4e-106 388.7 222 87.4
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 7.0e-106 388.3 222 83.3
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.2e-105 387.5 384 78.6
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 1.2e-105 387.5 386 80.3
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.6e-105 387.1 221 84.2
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 2.7e-105 386.3 221 87.8
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 3.5e-105 386.0 222 84.7
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 3.5e-105 386.0 383 79.4
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 3.5e-105 386.0 222 85.1
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 4.6e-105 385.6 222 85.6
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 1.0e-104 384.4 386 79.8
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 1.0e-104 384.4 222 85.6
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 1.3e-104 384.0 222 85.6
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 1.3e-104 384.0 222 85.6
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 5.0e-104 382.1 222 84.2
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 8.6e-104 381.3 222 85.1
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 8.6e-104 381.3 222 83.8
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 1.9e-103 380.2 222 86.0
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 3.3e-103 379.4 222 85.1
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 3.3e-103 379.4 222 82.0
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 3.3e-103 379.4 222 84.7
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 3.3e-103 379.4 222 82.4
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 5.6e-103 378.6 222 82.0
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 5.6e-103 378.6 222 82.0
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 5.6e-103 378.6 222 82.0
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 7.3e-103 378.3 383 71.5
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 1.6e-102 377.1 224 84.4
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 2.8e-102 376.3 222 84.7
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 2.8e-102 376.3 219 84.5
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 2.8e-102 376.3 215 88.4
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 2.8e-102 376.3 222 86.0
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 2.8e-102 376.3 222 83.3
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 3.6e-102 375.9 222 82.9
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 4.7e-102 375.6 222 85.1
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 6.2e-102 375.2 235 80.0
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 2.3e-101 373.2 222 83.3
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 2.3e-101 373.2 222 84.2
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 2.3e-101 373.2 222 84.2
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 8.9e-101 371.3 221 84.6
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 2.6e-100 369.8 222 80.6
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 2.6e-100 369.8 222 83.8
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 2.6e-100 369.8 274 73.0
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 3.4e-100 369.4 222 81.1
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 3.4e-100 369.4 222 83.3
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 5.8e-100 368.6 240 76.7
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 9.8e-100 367.9 222 81.1
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 1.7e-99 367.1 216 85.6
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 1.7e-99 367.1 216 85.6
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 2.2e-99 366.7 271 72.7
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 6.4e-99 365.2 224 81.7
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 1.1e-98 364.4 223 83.0
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 3.2e-98 362.8 190 91.1
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 7.0e-98 361.7 222 84.2
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 1.2e-97 360.9 190 88.4
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 1.6e-97 360.5 190 90.0
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 2.0e-97 360.1 219 81.7
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 2.7e-97 359.8 188 88.8
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 4.6e-97 359.0 190 88.4
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 6.0e-97 358.6 190 88.4
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 6.0e-97 358.6 219 82.2
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 6.0e-97 358.6 221 81.4
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 6.0e-97 358.6 221 81.4
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 6.0e-97 358.6 221 81.4
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 1.0e-96 357.8 190 87.9
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 1.3e-96 357.5 222 81.5
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 5.0e-96 355.5 190 86.3
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 8.6e-96 354.8 190 85.8
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 2.5e-95 353.2 210 84.3
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 4.3e-95 352.4 190 85.8
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 4.3e-95 352.4 190 85.3
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 4.3e-95 352.4 190 85.8
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 7.3e-95 351.7 190 86.3
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 1.2e-94 350.9 190 84.7
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 2.1e-94 350.1 190 86.3
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 2.0e-92 343.6 190 84.2
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 3.4e-92 342.8 190 84.7
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 4.4e-92 342.4 222 74.8
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 7.5e-92 341.7 240 71.7
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 9.9e-92 341.3 190 84.2
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 6.4e-91 338.6 222 76.1
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 1.1e-90 337.8 213 75.6
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 1.1e-90 337.8 399 80.7
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 4.1e-90 335.9 197 81.7
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 9.2e-90 334.7 190 83.2
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 2.7e-89 333.2 214 76.6
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 1.3e-88 330.9 218 78.4
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 5.1e-88 328.9 211 75.8
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 4.3e-87 325.9 218 73.4
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 1.2e-86 324.3 266 63.5
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 1.2e-86 324.3 190 80.5
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 4.7e-86 322.4 186 81.7
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 8.1e-86 321.6 190 79.5
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 6.8e-85 318.5 167 89.2
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 5.8e-84 315.5 167 88.0
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 4.9e-83 312.4 200 77.0
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 8.6e-80 301.6 387 47.0
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 3.0e-72 276.6 190 63.7
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 1.2e-68 264.6 224 65.6
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 6.7e-56 222.2 185 55.1
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 1.5e-55 221.1 184 57.1
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 1.8e-53 214.2 192 56.2
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 3.8e-51 206.5 171 63.2
Lj9C202T10 Lonicera japonica HOM05D005421 ORTHO05D007601 1.5e-47 194.5 97 93.8
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 2.4e-45 187.2 126 75.4
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 4.5e-44 183.0 124 71.0
SEGI_13779 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 1.0e-43 181.8 94 89.4
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 2.6e-28 130.6 84 83.3
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 1.2e-25 121.7 90 66.7
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 1.1e-23 115.2 70 77.1
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 1.1e-23 115.2 70 77.1
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 1.0e-16 92.0 60 71.7
RcHm_v2.0_Chr7g0209371 Rosa chinensis HOM05D005421 ORTHO05D007601 3.1e-13 80.5 53 62.3
BcaB06g27834 Brassica carinata HOM05D005421 ORTHO05D031867 2.0e-12 77.8 69 59.4
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 3.2e-10 70.5 42 78.6
Oeu029357.1 Olea europaea HOM05D005421 ORTHO05D026565 1.4e-08 65.1 53 64.2
ATR0693G087 Amborella trichopoda HOM05D005421 ORTHO05D026565 4.0e-08 63.5 55 70.9
BcaB06g29163 Brassica carinata HOM05D005421 ORTHO05D031077 5.7e-07 59.7 27 100.0
ATR0693G223 Amborella trichopoda HOM05D005421 ORTHO05D031077 2.8e-06 57.4 27 92.6


User provided reference genes

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